RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 UBL5Q9BZL1 73 aa10.66□□□□□ -0.7
LINC00943-205ENST00000539315 LINC00846Q9NV44 126 aa10.65□□□□□ -0.7
LINC00943-205ENST00000539315 LINC00472Q9H8W2 130 aa10.63□□□□□ -0.71
LINC00943-205ENST00000539315 K7ERU9 68 aa10.62□□□□□ -0.71
LINC00943-205ENST00000539315 Q6ZVQ6 151 aa10.61□□□□□ -0.71
LINC00943-205ENST00000539315 J3KT08 172 aa10.6□□□□□ -0.71
LINC00943-205ENST00000539315 FP248Q71RG6 208 aaPredicted RBP10.6□□□□□ -0.71
LINC00943-205ENST00000539315 IGKV4-1P06312 121 aa10.59□□□□□ -0.71
LINC00943-205ENST00000539315 Q96NJ1 140 aa10.59□□□□□ -0.71
LINC00943-205ENST00000539315 DEFB116Q30KQ4 102 aa10.58□□□□□ -0.72
LINC00943-205ENST00000539315 SIGMAR1Q99720 223 aa10.56□□□□□ -0.72
LINC00943-205ENST00000539315 BPY2O14599 106 aa10.55□□□□□ -0.72
LINC00943-205ENST00000539315 NDUFB1O75438 58 aa10.52□□□□□ -0.73
LINC00943-205ENST00000539315 KRTAP4-1Q9BYQ7 146 aa10.52□□□□□ -0.73
LINC00943-205ENST00000539315 KRTAP13-3Q3SY46 172 aa10.5□□□□□ -0.73
LINC00943-205ENST00000539315 FSIP2Q5CZC0 6907 aa10.49□□□□□ -0.73
LINC00943-205ENST00000539315 A8MWP4 228 aa10.47□□□□□ -0.73
LINC00943-205ENST00000539315 LINC00643Q86TS7 51 aa10.47□□□□□ -0.73
LINC00943-205ENST00000539315 CXCL6P80162 114 aa10.46□□□□□ -0.73
LINC00943-205ENST00000539315 DSCR10P59022 87 aa10.44□□□□□ -0.74
LINC00943-205ENST00000539315 ATP5EP2Q5VTU8 51 aa10.44□□□□□ -0.74
LINC00943-205ENST00000539315 A0A1B0GVX0 72 aa10.43□□□□□ -0.74
LINC00943-205ENST00000539315 IGHV6-1A0A0B4J1U7 121 aa10.42□□□□□ -0.74
LINC00943-205ENST00000539315 IGKV3D-7A0A0C4DH55 119 aa10.41□□□□□ -0.74
LINC00943-205ENST00000539315 PRR15Q8IV56 129 aa10.41□□□□□ -0.74
LINC00943-205ENST00000539315 LINC00313P59037 77 aa10.4□□□□□ -0.74
LINC00943-205ENST00000539315 C8orf87E5RJ46 101 aa10.39□□□□□ -0.75
LINC00943-205ENST00000539315 CRCT1Q9UGL9 99 aa10.39□□□□□ -0.75
LINC00943-205ENST00000539315 K7EQZ3 153 aa10.38□□□□□ -0.75
LINC00943-205ENST00000539315 C9orf92A6NGG3 77 aa10.37□□□□□ -0.75
LINC00943-205ENST00000539315 SEC61BP60468 96 aaKnown RBP10.36□□□□□ -0.75
LINC00943-205ENST00000539315 Q8N9L7 120 aa10.35□□□□□ -0.75
LINC00943-205ENST00000539315 LCE2CQ5TA81 110 aa10.33□□□□□ -0.76
LINC00943-205ENST00000539315 C8orf17Q9NRJ1 99 aa10.33□□□□□ -0.76
LINC00943-205ENST00000539315 HIST1H4AP62805 103 aaKnown RBP10.31□□□□□ -0.76
LINC00943-205ENST00000539315 NOTCH2NLQ7Z3S9 236 aa10.3□□□□□ -0.76
LINC00943-205ENST00000539315 XP32Q5T750 250 aa10.28□□□□□ -0.76
LINC00943-205ENST00000539315 KRTAP19-2Q3LHN2 52 aa10.27□□□□□ -0.77
LINC00943-205ENST00000539315 MMP24-AS1A0A0U1RRL7 71 aa10.26□□□□□ -0.77
LINC00943-205ENST00000539315 hDV103S1A0JD37 113 aa10.25□□□□□ -0.77
LINC00943-205ENST00000539315 HCG22E2RYF7 251 aa10.24□□□□□ -0.77
LINC00943-205ENST00000539315 CASC2Q6XLA1 102 aa10.24□□□□□ -0.77
LINC00943-205ENST00000539315 MT-ATP8P03928 68 aa10.23□□□□□ -0.77
LINC00943-205ENST00000539315 TMEM254Q8TBM7 123 aa10.23□□□□□ -0.77
LINC00943-205ENST00000539315 IMUPQ9GZP8 106 aa10.23□□□□□ -0.77
LINC00943-205ENST00000539315 WFDC13Q8IUB5 93 aa10.22□□□□□ -0.77
LINC00943-205ENST00000539315 KRTAP16-1A8MUX0 517 aa10.21□□□□□ -0.77
LINC00943-205ENST00000539315 MRPL34Q9BQ48 92 aaKnown RBP10.21□□□□□ -0.77
LINC00943-205ENST00000539315 MT1HP80294 61 aa10.19□□□□□ -0.78
LINC00943-205ENST00000539315 C20orf166-AS1Q96NR2 134 aa10.17□□□□□ -0.78
LINC00943-205ENST00000539315 A0A087WVE0 104 aa10.16□□□□□ -0.78
LINC00943-205ENST00000539315 A8MUU9 505 aa10.16□□□□□ -0.78
LINC00943-205ENST00000539315 Q75L30 129 aa10.16□□□□□ -0.78
LINC00943-205ENST00000539315 Q8N9P0 234 aaPredicted RBP10.15□□□□□ -0.78
LINC00943-205ENST00000539315 NDUFS5O43920 106 aa10.14□□□□□ -0.79
LINC00943-205ENST00000539315 RPL37P61927 97 aaKnown RBP10.13□□□□□ -0.79
LINC00943-205ENST00000539315 PCOTHQ58A44 107 aa10.11□□□□□ -0.79
LINC00943-205ENST00000539315 ATP11AUNQ6ZP68 121 aa10.11□□□□□ -0.79
LINC00943-205ENST00000539315 FLGP20930 4061 aaPredicted RBP10.09□□□□□ -0.79
LINC00943-205ENST00000539315 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
LINC00943-205ENST00000539315 SCGB1A1P11684 91 aa10.06□□□□□ -0.8
LINC00943-205ENST00000539315 TP53AIP1Q9HCN2 124 aa10.06□□□□□ -0.8
LINC00943-205ENST00000539315 KRTAP10-6P60371 365 aaPredicted RBP10.05□□□□□ -0.8
LINC00943-205ENST00000539315 ZCCHC13Q8WW36 166 aaKnown RBP10.01□□□□□ -0.81
LINC00943-205ENST00000539315 FAM236AA0A1B0GUQ0 79 aa9.99□□□□□ -0.81
LINC00943-205ENST00000539315 FAM236BA0A1B0GV22 79 aa9.99□□□□□ -0.81
LINC00943-205ENST00000539315 UQCRQO14949 82 aa9.95□□□□□ -0.82
LINC00943-205ENST00000539315 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
LINC00943-205ENST00000539315 Q5W150 140 aa9.91□□□□□ -0.82
LINC00943-205ENST00000539315 OCR1Q9BZK8 76 aa9.91□□□□□ -0.82
LINC00943-205ENST00000539315 ATOX1O00244 68 aa9.9□□□□□ -0.82
LINC00943-205ENST00000539315 M0R2T5 61 aa9.89□□□□□ -0.83
LINC00943-205ENST00000539315 TRAV22A0A0B4J277 110 aa9.86□□□□□ -0.83
LINC00943-205ENST00000539315 C5orf47Q569G3 176 aa9.85□□□□□ -0.83
LINC00943-205ENST00000539315 TRAV7A0A075B6U4 112 aa9.84□□□□□ -0.83
LINC00943-205ENST00000539315 H0Y9P7 68 aa9.82□□□□□ -0.84
LINC00943-205ENST00000539315 MP68P56378 58 aa9.82□□□□□ -0.84
LINC00943-205ENST00000539315 COX6B2Q6YFQ2 88 aa9.82□□□□□ -0.84
LINC00943-205ENST00000539315 SPINK7P58062 85 aa9.8□□□□□ -0.84
LINC00943-205ENST00000539315 IGKV2D-30A0A075B6S6 120 aa9.78□□□□□ -0.84
LINC00943-205ENST00000539315 IGKV2-30P06310 120 aa9.78□□□□□ -0.84
LINC00943-205ENST00000539315 SSPOA2VEC9 5147 aa9.78□□□□□ -0.84
LINC00943-205ENST00000539315 LOC101927531A0A1B0GV80 90 aa9.76□□□□□ -0.85
LINC00943-205ENST00000539315 C7orf65Q6ZTY9 151 aa9.76□□□□□ -0.85
LINC00943-205ENST00000539315 SERP2Q8N6R1 65 aa9.76□□□□□ -0.85
LINC00943-205ENST00000539315 USH2AO75445 5202 aa9.76□□□□□ -0.85
LINC00943-205ENST00000539315 H3BPC8 53 aa9.75□□□□□ -0.85
LINC00943-205ENST00000539315 C1orf64Q8NEQ6 169 aa9.74□□□□□ -0.85
LINC00943-205ENST00000539315 LINC00208Q96KT6 92 aa9.74□□□□□ -0.85
LINC00943-205ENST00000539315 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.7□□□□□ -0.86
LINC00943-205ENST00000539315 KRTAP9-7A8MTY7 169 aa9.69□□□□□ -0.86
LINC00943-205ENST00000539315 CYP4F30PQ9H0H9 118 aa9.69□□□□□ -0.86
LINC00943-205ENST00000539315 ANAPC13Q9BS18 74 aa9.68□□□□□ -0.86
LINC00943-205ENST00000539315 COX7CP15954 63 aa9.65□□□□□ -0.86
LINC00943-205ENST00000539315 LOC100996750A0A140TA64 210 aa9.63□□□□□ -0.87
LINC00943-205ENST00000539315 HRES1P13985 223 aa9.63□□□□□ -0.87
LINC00943-205ENST00000539315 KRTAP4-6Q9BYQ5 205 aa9.63□□□□□ -0.87
LINC00943-205ENST00000539315 RBM12B-AS1Q9P1G2 102 aa9.63□□□□□ -0.87
LINC00943-205ENST00000539315 KRTAP9-8Q9BYQ0 159 aa9.6□□□□□ -0.87
LINC00943-205ENST00000539315 C20orf197Q8N268 126 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms