RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 RICTORQ6R327 1708 aa-0.72□□□□□ -2.53
CCDC7-209ENST00000539197 DNAH1Q9P2D7 4330 aa-0.73□□□□□ -2.53
CCDC7-209ENST00000539197 CD163L1Q9NR16 1453 aa-0.73□□□□□ -2.53
CCDC7-209ENST00000539197 ARHGAP35Q9NRY4 1499 aa-0.73□□□□□ -2.53
CCDC7-209ENST00000539197 MGAM2Q2M2H8 2515 aa-0.73□□□□□ -2.53
CCDC7-209ENST00000539197 H3BVH4 76 aa-0.73□□□□□ -2.53
CCDC7-209ENST00000539197 KRTAP20-1Q3LI63 56 aa-0.73□□□□□ -2.53
CCDC7-209ENST00000539197 LRRK2Q5S007 2527 aa-0.73□□□□□ -2.53
CCDC7-209ENST00000539197 TRIOO75962 3097 aa-0.73□□□□□ -2.53
CCDC7-209ENST00000539197 SACSQ9NZJ4 4579 aa-0.74□□□□□ -2.53
CCDC7-209ENST00000539197 HFM1A2PYH4 1435 aa-0.74□□□□□ -2.53
CCDC7-209ENST00000539197 DDX60LQ5H9U9 1706 aaKnown RBP-0.75□□□□□ -2.53
CCDC7-209ENST00000539197 CEP290O15078 2479 aa-0.75□□□□□ -2.53
CCDC7-209ENST00000539197 RALGAPBQ86X10 1494 aa-0.75□□□□□ -2.53
CCDC7-209ENST00000539197 ACACAQ13085 2346 aa-0.76□□□□□ -2.53
CCDC7-209ENST00000539197 WT1-ASQ06250 92 aa-0.76□□□□□ -2.53
CCDC7-209ENST00000539197 CFAP43Q8NDM7 1665 aa-0.76□□□□□ -2.53
CCDC7-209ENST00000539197 ETDCA0A1B0GVM5 59 aa-0.77□□□□□ -2.53
CCDC7-209ENST00000539197 RPS27P42677 84 aaKnown RBP-0.77□□□□□ -2.53
CCDC7-209ENST00000539197 RPS27LQ71UM5 84 aaKnown RBP-0.77□□□□□ -2.53
CCDC7-209ENST00000539197 RANBP2P49792 3224 aaKnown RBP-0.77□□□□□ -2.53
CCDC7-209ENST00000539197 CFAP74Q9C0B2 1584 aa-0.78□□□□□ -2.53
CCDC7-209ENST00000539197 LMTK2Q8IWU2 1503 aa-0.78□□□□□ -2.53
CCDC7-209ENST00000539197 MINOS1Q5TGZ0 78 aa-0.78□□□□□ -2.53
CCDC7-209ENST00000539197 DNAH2Q9P225 4427 aa-0.78□□□□□ -2.53
CCDC7-209ENST00000539197 ANKARQ7Z5J8 1434 aa-0.79□□□□□ -2.54
CCDC7-209ENST00000539197 RRBP1Q9P2E9 1410 aaKnown RBP-0.79□□□□□ -2.54
CCDC7-209ENST00000539197 DNAH8Q96JB1 4490 aa-0.79□□□□□ -2.54
CCDC7-209ENST00000539197 CCDC168Q8NDH2 2452 aa-0.79□□□□□ -2.54
CCDC7-209ENST00000539197 CELSR3Q9NYQ7 3312 aa-0.79□□□□□ -2.54
CCDC7-209ENST00000539197 KIAA0586Q9BVV6 1533 aa-0.79□□□□□ -2.54
CCDC7-209ENST00000539197 FAM186AA6NE01 2351 aa-0.79□□□□□ -2.54
CCDC7-209ENST00000539197 ITSN1Q15811 1721 aa-0.8□□□□□ -2.54
CCDC7-209ENST00000539197 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.8□□□□□ -2.54
CCDC7-209ENST00000539197 DIP2AQ14689 1571 aa-0.8□□□□□ -2.54
CCDC7-209ENST00000539197 ACACBO00763 2458 aa-0.8□□□□□ -2.54
CCDC7-209ENST00000539197 TJP1Q07157 1748 aa-0.81□□□□□ -2.54
CCDC7-209ENST00000539197 THOC2Q8NI27 1593 aaKnown RBP-0.81□□□□□ -2.54
CCDC7-209ENST00000539197 HILPDAQ9Y5L2 63 aa-0.81□□□□□ -2.54
CCDC7-209ENST00000539197 ZC3H13Q5T200 1668 aaKnown RBP-0.81□□□□□ -2.54
CCDC7-209ENST00000539197 RNF17Q9BXT8 1623 aaKnown RBP-0.82□□□□□ -2.54
CCDC7-209ENST00000539197 KRTAP19-5Q3LI72 72 aa-0.82□□□□□ -2.54
CCDC7-209ENST00000539197 NCBP2-AS2Q69YL0 99 aa-0.82□□□□□ -2.54
CCDC7-209ENST00000539197 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.82□□□□□ -2.54
CCDC7-209ENST00000539197 IGLV5-48A0A075B6I7 105 aa-0.83□□□□□ -2.54
CCDC7-209ENST00000539197 ATXN8Q156A1 80 aa-0.83□□□□□ -2.54
CCDC7-209ENST00000539197 SFTA3P0C7M3 94 aa-0.84□□□□□ -2.54
CCDC7-209ENST00000539197 FCER1GP30273 86 aa-0.84□□□□□ -2.54
CCDC7-209ENST00000539197 MT1HP80294 61 aa-0.84□□□□□ -2.54
CCDC7-209ENST00000539197 C6orf48Q9UBA6 75 aa-0.84□□□□□ -2.54
CCDC7-209ENST00000539197 RELNP78509 3460 aa-0.84□□□□□ -2.54
CCDC7-209ENST00000539197 A0A0C4DFX4 3053 aa-0.84□□□□□ -2.54
CCDC7-209ENST00000539197 ABCA8O94911 1581 aa-0.84□□□□□ -2.54
CCDC7-209ENST00000539197 INO80Q9ULG1 1556 aaPredicted RBP-0.84□□□□□ -2.54
CCDC7-209ENST00000539197 ITSN2Q9NZM3 1697 aa-0.84□□□□□ -2.54
CCDC7-209ENST00000539197 ITPR2Q14571 2701 aa-0.85□□□□□ -2.55
CCDC7-209ENST00000539197 PLECQ15149 4684 aaKnown RBP-0.85□□□□□ -2.55
CCDC7-209ENST00000539197 ANKRD36CQ5JPF3 1778 aa-0.85□□□□□ -2.55
CCDC7-209ENST00000539197 ITPR1Q14643 2758 aa-0.86□□□□□ -2.55
CCDC7-209ENST00000539197 MMP24-AS1A0A0U1RRL7 71 aa-0.86□□□□□ -2.55
CCDC7-209ENST00000539197 DEFB1P60022 68 aa-0.86□□□□□ -2.55
CCDC7-209ENST00000539197 DEFB114Q30KQ6 69 aa-0.86□□□□□ -2.55
CCDC7-209ENST00000539197 TOGARAM1Q9Y4F4 1720 aa-0.86□□□□□ -2.55
CCDC7-209ENST00000539197 ABCC6O95255 1503 aa-0.87□□□□□ -2.55
CCDC7-209ENST00000539197 GNG13Q9P2W3 67 aa-0.87□□□□□ -2.55
CCDC7-209ENST00000539197 NRAPQ86VF7 1730 aa-0.87□□□□□ -2.55
CCDC7-209ENST00000539197 PARP4Q9UKK3 1724 aaKnown RBP-0.87□□□□□ -2.55
CCDC7-209ENST00000539197 CMYA5Q8N3K9 4069 aa-0.87□□□□□ -2.55
CCDC7-209ENST00000539197 LAMA3Q16787 3333 aa-0.87□□□□□ -2.55
CCDC7-209ENST00000539197 CDC42BPGQ6DT37 1551 aa-0.87□□□□□ -2.55
CCDC7-209ENST00000539197 SPENQ96T58 3664 aaKnown RBP-0.87□□□□□ -2.55
CCDC7-209ENST00000539197 SPTBN5Q9NRC6 3674 aaKnown RBP-0.87□□□□□ -2.55
CCDC7-209ENST00000539197 H3BUA1 57 aa-0.88□□□□□ -2.55
CCDC7-209ENST00000539197 KIF1AQ12756 1690 aa-0.88□□□□□ -2.55
CCDC7-209ENST00000539197 BPTFQ12830 3046 aa-0.89□□□□□ -2.55
CCDC7-209ENST00000539197 TNP1P09430 55 aa-0.89□□□□□ -2.55
CCDC7-209ENST00000539197 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.89□□□□□ -2.55
CCDC7-209ENST00000539197 SMR3BP02814 79 aaPredicted RBP-0.9□□□□□ -2.55
CCDC7-209ENST00000539197 SMCO4Q9NRQ5 59 aa-0.9□□□□□ -2.55
CCDC7-209ENST00000539197 TEX15Q9BXT5 2789 aa-0.91□□□□□ -2.55
CCDC7-209ENST00000539197 DNMBPQ6XZF7 1577 aa-0.91□□□□□ -2.55
CCDC7-209ENST00000539197 CLPSL2Q6UWE3 100 aa-0.91□□□□□ -2.56
CCDC7-209ENST00000539197 ASXL1Q8IXJ9 1541 aa-0.91□□□□□ -2.56
CCDC7-209ENST00000539197 FRYQ5TBA9 3013 aa-0.91□□□□□ -2.56
CCDC7-209ENST00000539197 DUOX2Q9NRD8 1548 aa-0.92□□□□□ -2.56
CCDC7-209ENST00000539197 PDCD5O14737 125 aa-0.92□□□□□ -2.56
CCDC7-209ENST00000539197 NOP10Q9NPE3 64 aaKnown RBP-0.92□□□□□ -2.56
CCDC7-209ENST00000539197 NHSQ6T4R5 1651 aa-0.92□□□□□ -2.56
CCDC7-209ENST00000539197 LRRIQ1Q96JM4 1722 aa-0.92□□□□□ -2.56
CCDC7-209ENST00000539197 UGGT2Q9NYU1 1516 aa-0.93□□□□□ -2.56
CCDC7-209ENST00000539197 DNAH7Q8WXX0 4024 aa-0.93□□□□□ -2.56
CCDC7-209ENST00000539197 C5orf42Q9H799 3197 aa-0.93□□□□□ -2.56
CCDC7-209ENST00000539197 TLN2Q9Y4G6 2542 aa-0.93□□□□□ -2.56
CCDC7-209ENST00000539197 MYO5CQ9NQX4 1742 aa-0.94□□□□□ -2.56
CCDC7-209ENST00000539197 LINC01549A6NIU2 74 aa-0.94□□□□□ -2.56
CCDC7-209ENST00000539197 IQGAP3Q86VI3 1631 aa-0.94□□□□□ -2.56
CCDC7-209ENST00000539197 KRTAP8-1Q8IUC2 63 aa-0.95□□□□□ -2.56
CCDC7-209ENST00000539197 DYNC1H1Q14204 4646 aaKnown RBP-0.96□□□□□ -2.56
CCDC7-209ENST00000539197 ABCA9Q8IUA7 1624 aa-0.97□□□□□ -2.56
CCDC7-209ENST00000539197 C3P01024 1663 aa-0.97□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms