RNA–Protein interactions for RNA: ENST00000539004.5

FAM60A-205, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-205ENST00000539004 PDZD2O15018 2839 aa0.29□□□□□ -2.36
FAM60A-205ENST00000539004 AKAP13Q12802 2813 aa0.28□□□□□ -2.36
FAM60A-205ENST00000539004 CREBBPQ92793 2442 aa0.28□□□□□ -2.36
FAM60A-205ENST00000539004 CHD8Q9HCK8 2581 aa0.28□□□□□ -2.36
FAM60A-205ENST00000539004 MMP24-AS1A0A0U1RRL7 71 aa0.28□□□□□ -2.36
FAM60A-205ENST00000539004 S4R3F8 94 aa0.28□□□□□ -2.36
FAM60A-205ENST00000539004 NBASA2RRP1 2371 aa0.28□□□□□ -2.36
FAM60A-205ENST00000539004 PKD1L2Q7Z442 2459 aa0.27□□□□□ -2.37
FAM60A-205ENST00000539004 VPS13BQ7Z7G8 4022 aa0.27□□□□□ -2.37
FAM60A-205ENST00000539004 HECTD1Q9ULT8 2610 aa0.27□□□□□ -2.37
FAM60A-205ENST00000539004 TNRC18O15417 2968 aaPredicted RBP0.27□□□□□ -2.37
FAM60A-205ENST00000539004 WNK1Q9H4A3 2382 aa0.27□□□□□ -2.37
FAM60A-205ENST00000539004 SACSQ9NZJ4 4579 aa0.27□□□□□ -2.37
FAM60A-205ENST00000539004 SRRM2Q9UQ35 2752 aaKnown RBP0.27□□□□□ -2.37
FAM60A-205ENST00000539004 FLNCQ14315 2725 aa0.26□□□□□ -2.37
FAM60A-205ENST00000539004 TENM2Q9NT68 2774 aa0.26□□□□□ -2.37
FAM60A-205ENST00000539004 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
FAM60A-205ENST00000539004 COL7A1Q02388 2944 aa0.26□□□□□ -2.37
FAM60A-205ENST00000539004 DNAH11Q96DT5 4516 aa0.25□□□□□ -2.37
FAM60A-205ENST00000539004 CHD7Q9P2D1 2997 aa0.25□□□□□ -2.37
FAM60A-205ENST00000539004 COL6A5A8TX70 2615 aa0.25□□□□□ -2.37
FAM60A-205ENST00000539004 STAB1Q9NY15 2570 aa0.25□□□□□ -2.37
FAM60A-205ENST00000539004 POLR2KP53803 58 aaKnown RBP0.25□□□□□ -2.37
FAM60A-205ENST00000539004 PRLHP81277 87 aa0.25□□□□□ -2.37
FAM60A-205ENST00000539004 TIMM8BQ9Y5J9 83 aaPredicted RBP0.25□□□□□ -2.37
FAM60A-205ENST00000539004 DEFB131AP59861 70 aa0.24□□□□□ -2.37
FAM60A-205ENST00000539004 NSD1Q96L73 2696 aaPredicted RBP0.24□□□□□ -2.37
FAM60A-205ENST00000539004 ACANP16112 2415 aa0.24□□□□□ -2.37
FAM60A-205ENST00000539004 VPS13DQ5THJ4 4388 aa0.23□□□□□ -2.37
FAM60A-205ENST00000539004 EPG5Q9HCE0 2579 aa0.23□□□□□ -2.37
FAM60A-205ENST00000539004 APC2O95996 2303 aa0.23□□□□□ -2.37
FAM60A-205ENST00000539004 ACACAQ13085 2346 aa0.23□□□□□ -2.37
FAM60A-205ENST00000539004 H3BUA1 57 aa0.23□□□□□ -2.37
FAM60A-205ENST00000539004 M0R2T5 61 aa0.23□□□□□ -2.37
FAM60A-205ENST00000539004 CLPSL2Q6UWE3 100 aa0.23□□□□□ -2.37
FAM60A-205ENST00000539004 SETXQ7Z333 2677 aaKnown RBP0.23□□□□□ -2.37
FAM60A-205ENST00000539004 ZZEF1O43149 2961 aa0.23□□□□□ -2.37
FAM60A-205ENST00000539004 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
FAM60A-205ENST00000539004 TACC2O95359 2948 aa0.22□□□□□ -2.37
FAM60A-205ENST00000539004 NF1P21359 2839 aa0.22□□□□□ -2.37
FAM60A-205ENST00000539004 PKD1P98161 4303 aa0.22□□□□□ -2.37
FAM60A-205ENST00000539004 FAM186AA6NE01 2351 aa0.22□□□□□ -2.37
FAM60A-205ENST00000539004 SPRR2DP22532 72 aa0.22□□□□□ -2.37
FAM60A-205ENST00000539004 HIVEP1P15822 2718 aa0.22□□□□□ -2.37
FAM60A-205ENST00000539004 FLNBO75369 2602 aaKnown RBP0.22□□□□□ -2.37
FAM60A-205ENST00000539004 SPENQ96T58 3664 aaKnown RBP0.22□□□□□ -2.37
FAM60A-205ENST00000539004 SPTBN4Q9H254 2564 aa0.22□□□□□ -2.37
FAM60A-205ENST00000539004 RIF1Q5UIP0 2472 aaKnown RBP0.22□□□□□ -2.37
FAM60A-205ENST00000539004 NBEAL2Q6ZNJ1 2754 aa0.22□□□□□ -2.37
FAM60A-205ENST00000539004 GCN1Q92616 2671 aaKnown RBP0.21□□□□□ -2.38
FAM60A-205ENST00000539004 USP9YO00507 2555 aaPredicted RBP0.21□□□□□ -2.38
FAM60A-205ENST00000539004 CCDC168Q8NDH2 2452 aa0.21□□□□□ -2.38
FAM60A-205ENST00000539004 WFDC10BQ8IUB3 73 aa0.21□□□□□ -2.38
FAM60A-205ENST00000539004 DEFB106AQ8N104 65 aa0.21□□□□□ -2.38
FAM60A-205ENST00000539004 KAAG1Q9UBP8 84 aa0.21□□□□□ -2.38
FAM60A-205ENST00000539004 HSPG2P98160 4391 aa0.21□□□□□ -2.38
FAM60A-205ENST00000539004 NBPF19A0A087WUL8 3843 aa0.21□□□□□ -2.38
FAM60A-205ENST00000539004 DNAH3Q8TD57 4116 aa0.2□□□□□ -2.38
FAM60A-205ENST00000539004 ITPR3Q14573 2671 aa0.2□□□□□ -2.38
FAM60A-205ENST00000539004 A8MTW9 85 aa0.2□□□□□ -2.38
FAM60A-205ENST00000539004 RPL39P62891 51 aaKnown RBP0.2□□□□□ -2.38
FAM60A-205ENST00000539004 SSPOA2VEC9 5147 aa0.2□□□□□ -2.38
FAM60A-205ENST00000539004 CUBNO60494 3623 aa0.19□□□□□ -2.38
FAM60A-205ENST00000539004 PKHD1L1Q86WI1 4243 aa0.19□□□□□ -2.38
FAM60A-205ENST00000539004 LRRK2Q5S007 2527 aa0.19□□□□□ -2.38
FAM60A-205ENST00000539004 DYNC2H1Q8NCM8 4307 aaKnown RBP0.19□□□□□ -2.38
FAM60A-205ENST00000539004 LAMA5O15230 3695 aa0.19□□□□□ -2.38
FAM60A-205ENST00000539004 ANKRD11Q6UB99 2663 aaPredicted RBP0.19□□□□□ -2.38
FAM60A-205ENST00000539004 SPRR2BP35325 72 aa0.19□□□□□ -2.38
FAM60A-205ENST00000539004 NOP10Q9NPE3 64 aaKnown RBP0.19□□□□□ -2.38
FAM60A-205ENST00000539004 SONP18583 2426 aaKnown RBP0.19□□□□□ -2.38
FAM60A-205ENST00000539004 HECTD4Q9Y4D8 3996 aa0.19□□□□□ -2.38
FAM60A-205ENST00000539004 DCHS2Q6V1P9 2916 aa0.19□□□□□ -2.38
FAM60A-205ENST00000539004 ANK3Q12955 4377 aaKnown RBP0.19□□□□□ -2.38
FAM60A-205ENST00000539004 TEP1Q99973 2627 aaKnown RBP0.18□□□□□ -2.38
FAM60A-205ENST00000539004 SPG11Q96JI7 2443 aa0.18□□□□□ -2.38
FAM60A-205ENST00000539004 ANKHD1Q8IWZ3 2542 aaKnown RBP0.18□□□□□ -2.38
FAM60A-205ENST00000539004 ZANQ9Y493 2812 aa0.18□□□□□ -2.38
FAM60A-205ENST00000539004 ACACBO00763 2458 aa0.18□□□□□ -2.38
FAM60A-205ENST00000539004 DEFB135Q30KP9 77 aa0.18□□□□□ -2.38
FAM60A-205ENST00000539004 KRTAP8-1Q8IUC2 63 aa0.18□□□□□ -2.38
FAM60A-205ENST00000539004 RPL39LQ96EH5 51 aaKnown RBP0.18□□□□□ -2.38
FAM60A-205ENST00000539004 COL12A1Q99715 3063 aa0.18□□□□□ -2.38
FAM60A-205ENST00000539004 ZFHX4Q86UP3 3567 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 DNAH8Q96JB1 4490 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 DNAH2Q9P225 4427 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 DMXL1Q9Y485 3027 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 FLGP20930 4061 aaPredicted RBP0.17□□□□□ -2.38
FAM60A-205ENST00000539004 MTORP42345 2549 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 TLN2Q9Y4G6 2542 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 DNAH7Q8WXX0 4024 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 C9orf92A6NGG3 77 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 M0QY20 66 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 M0QZ58 72 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 MT1AP04731 61 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 LINC01590Q5TEZ4 76 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 ARHGAP5-AS1Q96IT6 56 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 MYO18BQ8IUG5 2567 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 CRYBG3Q68DQ2 2970 aa0.17□□□□□ -2.38
FAM60A-205ENST00000539004 PKHD1P08F94 4074 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms