RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 IGLV7-46A0A075B6I9 117 aa7.76□□□□□ -1.17
PTPN21-202ENST00000536337 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
PTPN21-202ENST00000536337 SSBP3-AS1Q7Z2R9 100 aa7.75□□□□□ -1.17
PTPN21-202ENST00000536337 DMBT1Q9UGM3 2413 aaPredicted RBP7.75□□□□□ -1.17
PTPN21-202ENST00000536337 FAM229AH3BQW9 127 aa7.73□□□□□ -1.17
PTPN21-202ENST00000536337 Q5VV11 94 aa7.73□□□□□ -1.17
PTPN21-202ENST00000536337 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
PTPN21-202ENST00000536337 A8MU10 97 aa7.71□□□□□ -1.17
PTPN21-202ENST00000536337 PLAC8Q9NZF1 115 aa7.71□□□□□ -1.17
PTPN21-202ENST00000536337 FBN3Q75N90 2809 aa7.71□□□□□ -1.18
PTPN21-202ENST00000536337 Q6ZRN7 208 aaPredicted RBP7.7□□□□□ -1.18
PTPN21-202ENST00000536337 LCE6AA0A183 80 aa7.7□□□□□ -1.18
PTPN21-202ENST00000536337 C8orf87E5RJ46 101 aa7.7□□□□□ -1.18
PTPN21-202ENST00000536337 HRES1P13985 223 aa7.7□□□□□ -1.18
PTPN21-202ENST00000536337 KRTAP10-2P60368 255 aa7.68□□□□□ -1.18
PTPN21-202ENST00000536337 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
PTPN21-202ENST00000536337 C9orf92A6NGG3 77 aa7.67□□□□□ -1.18
PTPN21-202ENST00000536337 ATP11AUNQ6ZP68 121 aa7.67□□□□□ -1.18
PTPN21-202ENST00000536337 Q8N1X5 172 aa7.65□□□□□ -1.18
PTPN21-202ENST00000536337 Q5W150 140 aa7.65□□□□□ -1.18
PTPN21-202ENST00000536337 KRTAP13-1Q8IUC0 172 aa7.63□□□□□ -1.19
PTPN21-202ENST00000536337 SPINK7P58062 85 aa7.62□□□□□ -1.19
PTPN21-202ENST00000536337 LINC00483Q53H64 154 aa7.61□□□□□ -1.19
PTPN21-202ENST00000536337 H3BS24 57 aa7.61□□□□□ -1.19
PTPN21-202ENST00000536337 CDC42SE1Q9NRR8 79 aa7.59□□□□□ -1.2
PTPN21-202ENST00000536337 KRTAP10-1P60331 282 aa7.58□□□□□ -1.2
PTPN21-202ENST00000536337 Q6ZR54 194 aa7.58□□□□□ -1.2
PTPN21-202ENST00000536337 Q75L30 129 aa7.58□□□□□ -1.2
PTPN21-202ENST00000536337 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
PTPN21-202ENST00000536337 LINC01558Q9Y6Z2 57 aa7.56□□□□□ -1.2
PTPN21-202ENST00000536337 LCA10Q71F78 164 aa7.55□□□□□ -1.2
PTPN21-202ENST00000536337 MEGF8Q7Z7M0 2845 aa7.55□□□□□ -1.2
PTPN21-202ENST00000536337 UQCR11O14957 56 aa7.54□□□□□ -1.2
PTPN21-202ENST00000536337 FLG2Q5D862 2391 aaPredicted RBP7.54□□□□□ -1.2
PTPN21-202ENST00000536337 MIR22HGQ0VDD5 57 aa7.53□□□□□ -1.2
PTPN21-202ENST00000536337 PRAC1Q96KF2 57 aa7.53□□□□□ -1.2
PTPN21-202ENST00000536337 K7ERS5 55 aa7.47□□□□□ -1.21
PTPN21-202ENST00000536337 KRTAP13-2Q52LG2 175 aa7.44□□□□□ -1.22
PTPN21-202ENST00000536337 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
PTPN21-202ENST00000536337 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
PTPN21-202ENST00000536337 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
PTPN21-202ENST00000536337 ASB16-AS1Q495Z4 193 aa7.33□□□□□ -1.24
PTPN21-202ENST00000536337 DNAH10Q8IVF4 4471 aa7.32□□□□□ -1.24
PTPN21-202ENST00000536337 ANK2Q01484 3957 aa7.3□□□□□ -1.24
PTPN21-202ENST00000536337 A0A0D9SG42 100 aa7.28□□□□□ -1.24
PTPN21-202ENST00000536337 ADM2Q7Z4H4 148 aa7.27□□□□□ -1.25
PTPN21-202ENST00000536337 A6NN06 94 aa7.26□□□□□ -1.25
PTPN21-202ENST00000536337 A0A1B0GU33 70 aa7.25□□□□□ -1.25
PTPN21-202ENST00000536337 CRIPTQ9P021 101 aa7.24□□□□□ -1.25
PTPN21-202ENST00000536337 KRTAP1-4P0C5Y4 121 aa7.21□□□□□ -1.26
PTPN21-202ENST00000536337 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
PTPN21-202ENST00000536337 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
PTPN21-202ENST00000536337 Q6ZSA8 131 aa7.15□□□□□ -1.26
PTPN21-202ENST00000536337 LYSTQ99698 3801 aa7.13□□□□□ -1.27
PTPN21-202ENST00000536337 PLECQ15149 4684 aaKnown RBP7.12□□□□□ -1.27
PTPN21-202ENST00000536337 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
PTPN21-202ENST00000536337 KRTAP16-1A8MUX0 517 aa7.1□□□□□ -1.27
PTPN21-202ENST00000536337 DNAH9Q9NYC9 4486 aa7.08□□□□□ -1.28
PTPN21-202ENST00000536337 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
PTPN21-202ENST00000536337 Q5VSD8 79 aa7.03□□□□□ -1.28
PTPN21-202ENST00000536337 H1FX-AS1Q4G0G2 97 aa7.02□□□□□ -1.29
PTPN21-202ENST00000536337 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
PTPN21-202ENST00000536337 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
PTPN21-202ENST00000536337 DNAH11Q96DT5 4516 aa6.95□□□□□ -1.3
PTPN21-202ENST00000536337 S4R3F8 94 aa6.95□□□□□ -1.3
PTPN21-202ENST00000536337 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
PTPN21-202ENST00000536337 A8MUU9 505 aa6.94□□□□□ -1.3
PTPN21-202ENST00000536337 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
PTPN21-202ENST00000536337 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
PTPN21-202ENST00000536337 KMT2AQ03164 3969 aa6.9□□□□□ -1.3
PTPN21-202ENST00000536337 PRKDCP78527 4128 aaKnown RBP6.9□□□□□ -1.31
PTPN21-202ENST00000536337 H0YAA0 97 aa6.89□□□□□ -1.31
PTPN21-202ENST00000536337 RPL37P61927 97 aaKnown RBP6.89□□□□□ -1.31
PTPN21-202ENST00000536337 DNAH7Q8WXX0 4024 aa6.88□□□□□ -1.31
PTPN21-202ENST00000536337 J3QL48 77 aa6.87□□□□□ -1.31
PTPN21-202ENST00000536337 DNHD1Q96M86 4753 aa6.86□□□□□ -1.31
PTPN21-202ENST00000536337 CMYA5Q8N3K9 4069 aa6.85□□□□□ -1.31
PTPN21-202ENST00000536337 FRAS1Q86XX4 4008 aa6.82□□□□□ -1.32
PTPN21-202ENST00000536337 DNAH8Q96JB1 4490 aa6.81□□□□□ -1.32
PTPN21-202ENST00000536337 ROMO1P60602 79 aa6.81□□□□□ -1.32
PTPN21-202ENST00000536337 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
PTPN21-202ENST00000536337 VPS13DQ5THJ4 4388 aa6.78□□□□□ -1.32
PTPN21-202ENST00000536337 LRP1BQ9NZR2 4599 aa6.78□□□□□ -1.32
PTPN21-202ENST00000536337 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
PTPN21-202ENST00000536337 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
PTPN21-202ENST00000536337 DNAH17Q9UFH2 4485 aa6.73□□□□□ -1.33
PTPN21-202ENST00000536337 XP32Q5T750 250 aa6.72□□□□□ -1.33
PTPN21-202ENST00000536337 R4GN34 69 aa6.72□□□□□ -1.33
PTPN21-202ENST00000536337 FAT1Q14517 4588 aa6.7□□□□□ -1.34
PTPN21-202ENST00000536337 DNAH5Q8TE73 4624 aa6.7□□□□□ -1.34
PTPN21-202ENST00000536337 M0QZ58 72 aa6.69□□□□□ -1.34
PTPN21-202ENST00000536337 A0A1B0GVY2 172 aa6.68□□□□□ -1.34
PTPN21-202ENST00000536337 DNAH2Q9P225 4427 aa6.68□□□□□ -1.34
PTPN21-202ENST00000536337 DNAH6Q9C0G6 4158 aa6.68□□□□□ -1.34
PTPN21-202ENST00000536337 NDUFAF8A1L188 74 aa6.68□□□□□ -1.34
PTPN21-202ENST00000536337 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
PTPN21-202ENST00000536337 P0C880 135 aa6.67□□□□□ -1.34
PTPN21-202ENST00000536337 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
PTPN21-202ENST00000536337 KRTAP10-8P60410 259 aa6.61□□□□□ -1.35
PTPN21-202ENST00000536337 KRTAP21-3Q3LHN1 58 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms