RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
LIG1-203ENST00000536218 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
LIG1-203ENST00000536218 FBN3Q75N90 2809 aa8.49□□□□□ -1.05
LIG1-203ENST00000536218 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
LIG1-203ENST00000536218 A0A087WTM6 91 aa8.48□□□□□ -1.05
LIG1-203ENST00000536218 LY6G6CO95867 125 aa8.48□□□□□ -1.05
LIG1-203ENST00000536218 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
LIG1-203ENST00000536218 RETNLBQ9BQ08 111 aa8.47□□□□□ -1.05
LIG1-203ENST00000536218 IGLV8-61A0A075B6I0 122 aa8.46□□□□□ -1.05
LIG1-203ENST00000536218 TP53AIP1Q9HCN2 124 aa8.45□□□□□ -1.06
LIG1-203ENST00000536218 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
LIG1-203ENST00000536218 IGHV6-1A0A0B4J1U7 121 aa8.43□□□□□ -1.06
LIG1-203ENST00000536218 RTL8CO15255 209 aa8.43□□□□□ -1.06
LIG1-203ENST00000536218 Q6ZR54 194 aa8.4□□□□□ -1.06
LIG1-203ENST00000536218 C1orf134Q5TEV5 83 aa8.4□□□□□ -1.06
LIG1-203ENST00000536218 SPACA4Q8TDM5 124 aa8.39□□□□□ -1.07
LIG1-203ENST00000536218 C8orf17Q9NRJ1 99 aa8.39□□□□□ -1.07
LIG1-203ENST00000536218 DNAH2Q9P225 4427 aa8.39□□□□□ -1.07
LIG1-203ENST00000536218 A0A1B0GU69 56 aa8.39□□□□□ -1.07
LIG1-203ENST00000536218 IGLV5-52A0A0A0MRZ9 124 aa8.37□□□□□ -1.07
LIG1-203ENST00000536218 CDK2AP2O75956 126 aa8.34□□□□□ -1.07
LIG1-203ENST00000536218 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
LIG1-203ENST00000536218 IGLV9-49A0A0B4J1Y8 123 aa8.34□□□□□ -1.07
LIG1-203ENST00000536218 ACYP2P14621 99 aa8.33□□□□□ -1.08
LIG1-203ENST00000536218 HECTD4Q9Y4D8 3996 aa8.32□□□□□ -1.08
LIG1-203ENST00000536218 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
LIG1-203ENST00000536218 MRPL34Q9BQ48 92 aaKnown RBP8.31□□□□□ -1.08
LIG1-203ENST00000536218 SPATA8Q6RVD6 105 aa8.31□□□□□ -1.08
LIG1-203ENST00000536218 ANAPC11Q9NYG5 84 aa8.3□□□□□ -1.08
LIG1-203ENST00000536218 ASB16-AS1Q495Z4 193 aa8.3□□□□□ -1.08
LIG1-203ENST00000536218 A0A087X002 238 aa8.29□□□□□ -1.08
LIG1-203ENST00000536218 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
LIG1-203ENST00000536218 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
LIG1-203ENST00000536218 ZNF706Q9Y5V0 76 aaPredicted RBP8.29□□□□□ -1.08
LIG1-203ENST00000536218 UQCR11O14957 56 aa8.28□□□□□ -1.08
LIG1-203ENST00000536218 Q96NJ1 140 aa8.28□□□□□ -1.08
LIG1-203ENST00000536218 WWC2-AS2Q96NR7 200 aa8.28□□□□□ -1.08
LIG1-203ENST00000536218 A0A1B0GVX0 72 aa8.28□□□□□ -1.08
LIG1-203ENST00000536218 SPRR1BP22528 89 aa8.27□□□□□ -1.09
LIG1-203ENST00000536218 KRTAP10-2P60368 255 aa8.27□□□□□ -1.09
LIG1-203ENST00000536218 DNAH17Q9UFH2 4485 aa8.27□□□□□ -1.09
LIG1-203ENST00000536218 Q5W150 140 aa8.26□□□□□ -1.09
LIG1-203ENST00000536218 FRAS1Q86XX4 4008 aa8.26□□□□□ -1.09
LIG1-203ENST00000536218 SPINK6Q6UWN8 80 aa8.22□□□□□ -1.09
LIG1-203ENST00000536218 DNAH6Q9C0G6 4158 aa8.22□□□□□ -1.09
LIG1-203ENST00000536218 DNAH8Q96JB1 4490 aa8.22□□□□□ -1.09
LIG1-203ENST00000536218 HYDINQ4G0P3 5121 aa8.21□□□□□ -1.09
LIG1-203ENST00000536218 ZNF861PO60384 105 aa8.21□□□□□ -1.1
LIG1-203ENST00000536218 DNAH11Q96DT5 4516 aa8.2□□□□□ -1.1
LIG1-203ENST00000536218 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
LIG1-203ENST00000536218 DMAC1Q96GE9 116 aa8.16□□□□□ -1.1
LIG1-203ENST00000536218 DNAH5Q8TE73 4624 aa8.15□□□□□ -1.1
LIG1-203ENST00000536218 IGLV7-43P04211 117 aa8.15□□□□□ -1.1
LIG1-203ENST00000536218 KRTAP10-1P60331 282 aa8.14□□□□□ -1.11
LIG1-203ENST00000536218 LINC00483Q53H64 154 aa8.13□□□□□ -1.11
LIG1-203ENST00000536218 KRTAP21-3Q3LHN1 58 aa8.12□□□□□ -1.11
LIG1-203ENST00000536218 ROMO1P60602 79 aa8.09□□□□□ -1.11
LIG1-203ENST00000536218 FLG2Q5D862 2391 aaPredicted RBP8.08□□□□□ -1.12
LIG1-203ENST00000536218 KRTAP13-3Q3SY46 172 aa8.07□□□□□ -1.12
LIG1-203ENST00000536218 LRP1BQ9NZR2 4599 aa8.07□□□□□ -1.12
LIG1-203ENST00000536218 SPINK1P00995 79 aa8.06□□□□□ -1.12
LIG1-203ENST00000536218 ALMS1Q8TCU4 4167 aa8.05□□□□□ -1.12
LIG1-203ENST00000536218 FAT2Q9NYQ8 4349 aa8.04□□□□□ -1.12
LIG1-203ENST00000536218 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
LIG1-203ENST00000536218 PKD1P98161 4303 aa8.02□□□□□ -1.13
LIG1-203ENST00000536218 Q6ZSA8 131 aa8.01□□□□□ -1.13
LIG1-203ENST00000536218 CRIPTQ9P021 101 aa8.01□□□□□ -1.13
LIG1-203ENST00000536218 IGKV2D-30A0A075B6S6 120 aa7.99□□□□□ -1.13
LIG1-203ENST00000536218 IGKV2-30P06310 120 aa7.99□□□□□ -1.13
LIG1-203ENST00000536218 SACSQ9NZJ4 4579 aa7.97□□□□□ -1.13
LIG1-203ENST00000536218 FAM229AH3BQW9 127 aa7.96□□□□□ -1.14
LIG1-203ENST00000536218 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
LIG1-203ENST00000536218 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
LIG1-203ENST00000536218 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
LIG1-203ENST00000536218 SSBP3-AS1Q7Z2R9 100 aa7.94□□□□□ -1.14
LIG1-203ENST00000536218 VPS13BQ7Z7G8 4022 aa7.93□□□□□ -1.14
LIG1-203ENST00000536218 LINC00304Q8N9R0 145 aa7.92□□□□□ -1.14
LIG1-203ENST00000536218 A8MUU9 505 aa7.92□□□□□ -1.14
LIG1-203ENST00000536218 P0C880 135 aa7.88□□□□□ -1.15
LIG1-203ENST00000536218 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
LIG1-203ENST00000536218 H0YAA0 97 aa7.85□□□□□ -1.15
LIG1-203ENST00000536218 Q8N1X5 172 aa7.85□□□□□ -1.15
LIG1-203ENST00000536218 DYNC1H1Q14204 4646 aaKnown RBP7.84□□□□□ -1.15
LIG1-203ENST00000536218 TYMSOSQ8TAI1 123 aa7.83□□□□□ -1.16
LIG1-203ENST00000536218 FAT1Q14517 4588 aa7.81□□□□□ -1.16
LIG1-203ENST00000536218 KMT2CQ8NEZ4 4911 aaKnown RBP7.8□□□□□ -1.16
LIG1-203ENST00000536218 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
LIG1-203ENST00000536218 A0A1B0GVY2 172 aa7.76□□□□□ -1.17
LIG1-203ENST00000536218 A0A1B0GU33 70 aa7.75□□□□□ -1.17
LIG1-203ENST00000536218 RYR2Q92736 4967 aa7.74□□□□□ -1.17
LIG1-203ENST00000536218 KRTAP16-1A8MUX0 517 aa7.72□□□□□ -1.17
LIG1-203ENST00000536218 K7ERS5 55 aa7.7□□□□□ -1.18
LIG1-203ENST00000536218 APOBP04114 4563 aaKnown RBP7.69□□□□□ -1.18
LIG1-203ENST00000536218 NDUFAF8A1L188 74 aa7.69□□□□□ -1.18
LIG1-203ENST00000536218 DMBT1Q9UGM3 2413 aaPredicted RBP7.65□□□□□ -1.19
LIG1-203ENST00000536218 H1FX-AS1Q4G0G2 97 aa7.65□□□□□ -1.19
LIG1-203ENST00000536218 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
LIG1-203ENST00000536218 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
LIG1-203ENST00000536218 C20orf166-AS1Q96NR2 134 aa7.57□□□□□ -1.2
LIG1-203ENST00000536218 A0A0A0MQY5 61 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms