RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 CDK2AP2O75956 126 aa8.28□□□□□ -1.08
LPCAT3-203ENST00000535479 SPRR1BP22528 89 aa8.28□□□□□ -1.08
LPCAT3-203ENST00000535479 C14orf177Q52M58 125 aa8.28□□□□□ -1.08
LPCAT3-203ENST00000535479 SPACA4Q8TDM5 124 aa8.28□□□□□ -1.08
LPCAT3-203ENST00000535479 RTL8CO15255 209 aa8.27□□□□□ -1.09
LPCAT3-203ENST00000535479 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
LPCAT3-203ENST00000535479 A0A087WTM6 91 aa8.25□□□□□ -1.09
LPCAT3-203ENST00000535479 DYNC2H1Q8NCM8 4307 aaKnown RBP8.25□□□□□ -1.09
LPCAT3-203ENST00000535479 SPINK7P58062 85 aa8.24□□□□□ -1.09
LPCAT3-203ENST00000535479 ALMS1Q8TCU4 4167 aa8.24□□□□□ -1.09
LPCAT3-203ENST00000535479 A0A1B0GVX0 72 aa8.23□□□□□ -1.09
LPCAT3-203ENST00000535479 HRES1P13985 223 aa8.23□□□□□ -1.09
LPCAT3-203ENST00000535479 LRP1BQ9NZR2 4599 aa8.22□□□□□ -1.09
LPCAT3-203ENST00000535479 IGLV7-46A0A075B6I9 117 aa8.21□□□□□ -1.09
LPCAT3-203ENST00000535479 HYDINQ4G0P3 5121 aa8.2□□□□□ -1.1
LPCAT3-203ENST00000535479 Q6ZR54 194 aa8.2□□□□□ -1.1
LPCAT3-203ENST00000535479 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
LPCAT3-203ENST00000535479 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
LPCAT3-203ENST00000535479 IGLV5-52A0A0A0MRZ9 124 aa8.19□□□□□ -1.1
LPCAT3-203ENST00000535479 LY6G6CO95867 125 aa8.17□□□□□ -1.1
LPCAT3-203ENST00000535479 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
LPCAT3-203ENST00000535479 FAT2Q9NYQ8 4349 aa8.16□□□□□ -1.1
LPCAT3-203ENST00000535479 LIMD2Q9BT23 127 aa8.16□□□□□ -1.1
LPCAT3-203ENST00000535479 ZNF861PO60384 105 aa8.15□□□□□ -1.1
LPCAT3-203ENST00000535479 C4orf48Q5BLP8 95 aa8.13□□□□□ -1.11
LPCAT3-203ENST00000535479 H3BPC8 53 aa8.13□□□□□ -1.11
LPCAT3-203ENST00000535479 KRTAP10-2P60368 255 aa8.13□□□□□ -1.11
LPCAT3-203ENST00000535479 LOC101927531A0A1B0GV80 90 aa8.11□□□□□ -1.11
LPCAT3-203ENST00000535479 NUPR2A6NF83 97 aa8.11□□□□□ -1.11
LPCAT3-203ENST00000535479 LINC00483Q53H64 154 aa8.09□□□□□ -1.11
LPCAT3-203ENST00000535479 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
LPCAT3-203ENST00000535479 TP53AIP1Q9HCN2 124 aa8.09□□□□□ -1.12
LPCAT3-203ENST00000535479 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
LPCAT3-203ENST00000535479 Q75L30 129 aa8.08□□□□□ -1.12
LPCAT3-203ENST00000535479 IGKV2D-30A0A075B6S6 120 aa8.06□□□□□ -1.12
LPCAT3-203ENST00000535479 IGLV7-43P04211 117 aa8.06□□□□□ -1.12
LPCAT3-203ENST00000535479 IGKV2-30P06310 120 aa8.06□□□□□ -1.12
LPCAT3-203ENST00000535479 PRAC1Q96KF2 57 aa8.06□□□□□ -1.12
LPCAT3-203ENST00000535479 SPINK1P00995 79 aa8.05□□□□□ -1.12
LPCAT3-203ENST00000535479 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
LPCAT3-203ENST00000535479 ZNF706Q9Y5V0 76 aaPredicted RBP8.05□□□□□ -1.12
LPCAT3-203ENST00000535479 PKHD1P08F94 4074 aa8.04□□□□□ -1.12
LPCAT3-203ENST00000535479 PLAC8Q9NZF1 115 aa8.03□□□□□ -1.12
LPCAT3-203ENST00000535479 C1orf134Q5TEV5 83 aa8.02□□□□□ -1.12
LPCAT3-203ENST00000535479 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
LPCAT3-203ENST00000535479 KRTAP13-2Q52LG2 175 aa8□□□□□ -1.13
LPCAT3-203ENST00000535479 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
LPCAT3-203ENST00000535479 RBM12B-AS1Q9P1G2 102 aa7.99□□□□□ -1.13
LPCAT3-203ENST00000535479 LINC00313P59037 77 aa7.99□□□□□ -1.13
LPCAT3-203ENST00000535479 A6NN06 94 aa7.98□□□□□ -1.13
LPCAT3-203ENST00000535479 KTN1-AS1Q86SY8 53 aa7.97□□□□□ -1.13
LPCAT3-203ENST00000535479 KRTAP13-3Q3SY46 172 aa7.96□□□□□ -1.13
LPCAT3-203ENST00000535479 ATP11AUNQ6ZP68 121 aa7.96□□□□□ -1.13
LPCAT3-203ENST00000535479 Q8N1X5 172 aa7.95□□□□□ -1.14
LPCAT3-203ENST00000535479 KRTAP10-1P60331 282 aa7.95□□□□□ -1.14
LPCAT3-203ENST00000535479 FAT1Q14517 4588 aa7.93□□□□□ -1.14
LPCAT3-203ENST00000535479 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
LPCAT3-203ENST00000535479 PKD1P98161 4303 aa7.93□□□□□ -1.14
LPCAT3-203ENST00000535479 ACYP2P14621 99 aa7.91□□□□□ -1.14
LPCAT3-203ENST00000535479 A0A1B0GU69 56 aa7.89□□□□□ -1.15
LPCAT3-203ENST00000535479 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
LPCAT3-203ENST00000535479 C7orf65Q6ZTY9 151 aa7.87□□□□□ -1.15
LPCAT3-203ENST00000535479 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
LPCAT3-203ENST00000535479 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
LPCAT3-203ENST00000535479 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
LPCAT3-203ENST00000535479 DMAC1Q96GE9 116 aa7.82□□□□□ -1.16
LPCAT3-203ENST00000535479 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
LPCAT3-203ENST00000535479 SSBP3-AS1Q7Z2R9 100 aa7.81□□□□□ -1.16
LPCAT3-203ENST00000535479 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
LPCAT3-203ENST00000535479 H3BS24 57 aa7.8□□□□□ -1.16
LPCAT3-203ENST00000535479 KRTAP1-4P0C5Y4 121 aa7.79□□□□□ -1.16
LPCAT3-203ENST00000535479 TYMSOSQ8TAI1 123 aa7.77□□□□□ -1.17
LPCAT3-203ENST00000535479 C8orf87E5RJ46 101 aa7.76□□□□□ -1.17
LPCAT3-203ENST00000535479 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
LPCAT3-203ENST00000535479 MYCBP2O75592 4640 aa7.74□□□□□ -1.17
LPCAT3-203ENST00000535479 DYNC1H1Q14204 4646 aaKnown RBP7.7□□□□□ -1.18
LPCAT3-203ENST00000535479 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
LPCAT3-203ENST00000535479 LRP1Q07954 4544 aaKnown RBP7.67□□□□□ -1.18
LPCAT3-203ENST00000535479 UQCR11O14957 56 aa7.65□□□□□ -1.18
LPCAT3-203ENST00000535479 SACSQ9NZJ4 4579 aa7.65□□□□□ -1.18
LPCAT3-203ENST00000535479 CSAG1Q6PB30 78 aa7.64□□□□□ -1.19
LPCAT3-203ENST00000535479 Q6ZSA8 131 aa7.62□□□□□ -1.19
LPCAT3-203ENST00000535479 SPATA8Q6RVD6 105 aa7.61□□□□□ -1.19
LPCAT3-203ENST00000535479 LINC00304Q8N9R0 145 aa7.6□□□□□ -1.19
LPCAT3-203ENST00000535479 KMT2CQ8NEZ4 4911 aaKnown RBP7.56□□□□□ -1.2
LPCAT3-203ENST00000535479 APOBP04114 4563 aaKnown RBP7.55□□□□□ -1.2
LPCAT3-203ENST00000535479 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
LPCAT3-203ENST00000535479 HSPG2P98160 4391 aa7.53□□□□□ -1.2
LPCAT3-203ENST00000535479 H0YAA0 97 aa7.52□□□□□ -1.21
LPCAT3-203ENST00000535479 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
LPCAT3-203ENST00000535479 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
LPCAT3-203ENST00000535479 FAT3Q8TDW7 4589 aa7.47□□□□□ -1.21
LPCAT3-203ENST00000535479 LPAP08519 4548 aa7.44□□□□□ -1.22
LPCAT3-203ENST00000535479 A0A0D9SG42 100 aa7.41□□□□□ -1.22
LPCAT3-203ENST00000535479 A0A1B0GU33 70 aa7.4□□□□□ -1.22
LPCAT3-203ENST00000535479 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
LPCAT3-203ENST00000535479 RYR2Q92736 4967 aa7.31□□□□□ -1.24
LPCAT3-203ENST00000535479 A8MUU9 505 aa7.31□□□□□ -1.24
LPCAT3-203ENST00000535479 COX6B2Q6YFQ2 88 aa7.29□□□□□ -1.24
LPCAT3-203ENST00000535479 C20orf166-AS1Q96NR2 134 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms