RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 NDUFA3O95167 84 aa0.75□□□□□ -2.29
ME3-211ENST00000534638 ATXN8Q156A1 80 aa0.75□□□□□ -2.29
ME3-211ENST00000534638 DEFB109BQ30KR1 87 aa0.75□□□□□ -2.29
ME3-211ENST00000534638 RICTORQ6R327 1708 aa0.75□□□□□ -2.29
ME3-211ENST00000534638 NBASA2RRP1 2371 aa0.75□□□□□ -2.29
ME3-211ENST00000534638 ADGRG4Q8IZF6 3080 aa0.74□□□□□ -2.29
ME3-211ENST00000534638 ENHOQ6UWT2 76 aa0.74□□□□□ -2.29
ME3-211ENST00000534638 ITSN1Q15811 1721 aa0.74□□□□□ -2.29
ME3-211ENST00000534638 TRIOO75962 3097 aa0.74□□□□□ -2.29
ME3-211ENST00000534638 ADCY10Q96PN6 1610 aa0.74□□□□□ -2.29
ME3-211ENST00000534638 GLI2P10070 1586 aa0.74□□□□□ -2.29
ME3-211ENST00000534638 CDC42BPGQ6DT37 1551 aa0.74□□□□□ -2.29
ME3-211ENST00000534638 LMTK2Q8IWU2 1503 aa0.74□□□□□ -2.29
ME3-211ENST00000534638 AKAP6Q13023 2319 aa0.73□□□□□ -2.29
ME3-211ENST00000534638 CSPG4Q6UVK1 2322 aa0.73□□□□□ -2.29
ME3-211ENST00000534638 PKDREJQ9NTG1 2253 aa0.73□□□□□ -2.29
ME3-211ENST00000534638 CHD7Q9P2D1 2997 aa0.73□□□□□ -2.29
ME3-211ENST00000534638 CSMD3Q7Z407 3707 aa0.73□□□□□ -2.29
ME3-211ENST00000534638 SMR3AQ99954 134 aa0.73□□□□□ -2.29
ME3-211ENST00000534638 MROH1Q8NDA8 1641 aa0.73□□□□□ -2.29
ME3-211ENST00000534638 CCL22O00626 93 aa0.72□□□□□ -2.29
ME3-211ENST00000534638 KIAA0586Q9BVV6 1533 aa0.72□□□□□ -2.29
ME3-211ENST00000534638 ANKRD50Q9ULJ7 1429 aa0.72□□□□□ -2.29
ME3-211ENST00000534638 CROCC2H7BZ55 1655 aa0.72□□□□□ -2.29
ME3-211ENST00000534638 PREX2Q70Z35 1606 aa0.71□□□□□ -2.3
ME3-211ENST00000534638 ABCA9Q8IUA7 1624 aa0.71□□□□□ -2.3
ME3-211ENST00000534638 SPINK1P00995 79 aa0.71□□□□□ -2.3
ME3-211ENST00000534638 KRTAP5-10Q6L8G5 202 aa0.71□□□□□ -2.3
ME3-211ENST00000534638 CDKN2A-AS1Q9UH64 79 aa0.71□□□□□ -2.3
ME3-211ENST00000534638 PLCH1Q4KWH8 1693 aa0.71□□□□□ -2.3
ME3-211ENST00000534638 HECTD4Q9Y4D8 3996 aa0.71□□□□□ -2.3
ME3-211ENST00000534638 C3orf79P0CE67 100 aa0.7□□□□□ -2.3
ME3-211ENST00000534638 APC2O95996 2303 aa0.7□□□□□ -2.3
ME3-211ENST00000534638 MUC12Q9UKN1 5478 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 ERICH3Q5RHP9 1530 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 A0A087WWC5 75 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 SPINK4O60575 86 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 WFDC13Q8IUB5 93 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 S100ZQ8WXG8 99 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 EEA1Q15075 1411 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 TACC2O95359 2948 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 MGAQ8IWI9 3026 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 EFCAB5A4FU69 1503 aa0.69□□□□□ -2.3
ME3-211ENST00000534638 AKAP9Q99996 3911 aa0.68□□□□□ -2.3
ME3-211ENST00000534638 LAMA1P25391 3075 aa0.68□□□□□ -2.3
ME3-211ENST00000534638 PARP4Q9UKK3 1724 aaKnown RBP0.68□□□□□ -2.3
ME3-211ENST00000534638 PRKDCP78527 4128 aaKnown RBP0.67□□□□□ -2.3
ME3-211ENST00000534638 USH2AO75445 5202 aa0.67□□□□□ -2.3
ME3-211ENST00000534638 SRRM2Q9UQ35 2752 aaKnown RBP0.67□□□□□ -2.3
ME3-211ENST00000534638 LINC01549A6NIU2 74 aa0.67□□□□□ -2.3
ME3-211ENST00000534638 TNRC6CQ9HCJ0 1690 aaKnown RBP0.67□□□□□ -2.3
ME3-211ENST00000534638 FAT3Q8TDW7 4589 aa0.66□□□□□ -2.3
ME3-211ENST00000534638 NRXN3Q9Y4C0 1643 aa0.66□□□□□ -2.3
ME3-211ENST00000534638 NRAPQ86VF7 1730 aa0.66□□□□□ -2.3
ME3-211ENST00000534638 INO80Q9ULG1 1556 aaPredicted RBP0.66□□□□□ -2.3
ME3-211ENST00000534638 SYNE1Q8NF91 8797 aaKnown RBP0.65□□□□□ -2.3
ME3-211ENST00000534638 DNAH1Q9P2D7 4330 aa0.65□□□□□ -2.31
ME3-211ENST00000534638 EIF2AK4Q9P2K8 1649 aaKnown RBP0.65□□□□□ -2.31
ME3-211ENST00000534638 COX6B2Q6YFQ2 88 aa0.65□□□□□ -2.31
ME3-211ENST00000534638 HFM1A2PYH4 1435 aa0.64□□□□□ -2.31
ME3-211ENST00000534638 SFTA3P0C7M3 94 aa0.64□□□□□ -2.31
ME3-211ENST00000534638 LINC00158P58513 81 aa0.64□□□□□ -2.31
ME3-211ENST00000534638 UBL5Q9BZL1 73 aa0.64□□□□□ -2.31
ME3-211ENST00000534638 U3KQA8 63 aa0.64□□□□□ -2.31
ME3-211ENST00000534638 TJP1Q07157 1748 aa0.64□□□□□ -2.31
ME3-211ENST00000534638 DDX60LQ5H9U9 1706 aaKnown RBP0.64□□□□□ -2.31
ME3-211ENST00000534638 CRIP1P50238 77 aa0.63□□□□□ -2.31
ME3-211ENST00000534638 CMYA5Q8N3K9 4069 aa0.63□□□□□ -2.31
ME3-211ENST00000534638 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
ME3-211ENST00000534638 PKHD1P08F94 4074 aa0.63□□□□□ -2.31
ME3-211ENST00000534638 UGGT1Q9NYU2 1555 aa0.62□□□□□ -2.31
ME3-211ENST00000534638 DYNC2H1Q8NCM8 4307 aaKnown RBP0.62□□□□□ -2.31
ME3-211ENST00000534638 DNAH7Q8WXX0 4024 aa0.62□□□□□ -2.31
ME3-211ENST00000534638 KCNQ1DNQ9H478 68 aa0.62□□□□□ -2.31
ME3-211ENST00000534638 KNL1Q8NG31 2342 aa0.61□□□□□ -2.31
ME3-211ENST00000534638 C4AP0C0L4 1744 aa0.61□□□□□ -2.31
ME3-211ENST00000534638 C4BP0C0L5 1744 aa0.61□□□□□ -2.31
ME3-211ENST00000534638 TRRAPQ9Y4A5 3859 aa0.61□□□□□ -2.31
ME3-211ENST00000534638 NHSQ6T4R5 1651 aa0.61□□□□□ -2.31
ME3-211ENST00000534638 ALMS1Q8TCU4 4167 aa0.6□□□□□ -2.31
ME3-211ENST00000534638 DEFB131BA0A096LNP1 70 aa0.6□□□□□ -2.31
ME3-211ENST00000534638 ETDCA0A1B0GVM5 59 aa0.6□□□□□ -2.31
ME3-211ENST00000534638 SACSQ9NZJ4 4579 aa0.6□□□□□ -2.31
ME3-211ENST00000534638 LRP1BQ9NZR2 4599 aa0.6□□□□□ -2.31
ME3-211ENST00000534638 LYSTQ99698 3801 aa0.6□□□□□ -2.31
ME3-211ENST00000534638 C3P01024 1663 aa0.59□□□□□ -2.31
ME3-211ENST00000534638 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
ME3-211ENST00000534638 MAST1Q9Y2H9 1570 aa0.59□□□□□ -2.31
ME3-211ENST00000534638 LOC730098B7Z3J9 87 aa0.59□□□□□ -2.31
ME3-211ENST00000534638 H0YAA0 97 aa0.59□□□□□ -2.31
ME3-211ENST00000534638 FAT2Q9NYQ8 4349 aa0.59□□□□□ -2.32
ME3-211ENST00000534638 CCDC180Q9P1Z9 1646 aa0.59□□□□□ -2.32
ME3-211ENST00000534638 MRPL33O75394 65 aaKnown RBP0.58□□□□□ -2.32
ME3-211ENST00000534638 HSPG2P98160 4391 aa0.57□□□□□ -2.32
ME3-211ENST00000534638 FCER1GP30273 86 aa0.56□□□□□ -2.32
ME3-211ENST00000534638 SMIM5Q71RC9 77 aa0.56□□□□□ -2.32
ME3-211ENST00000534638 ABCA6Q8N139 1617 aa0.56□□□□□ -2.32
ME3-211ENST00000534638 DYNC1H1Q14204 4646 aaKnown RBP0.56□□□□□ -2.32
ME3-211ENST00000534638 LRP2P98164 4655 aa0.55□□□□□ -2.32
ME3-211ENST00000534638 K7EMI3 77 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms