RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 XAGE1AQ9HD64 81 aa2.38□□□□□ -2.03
CASP4-213ENST00000534356 C22orf24Q9Y442 160 aa2.38□□□□□ -2.03
CASP4-213ENST00000534356 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
CASP4-213ENST00000534356 ZNF727A8MUV8 499 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 H3BT86 120 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 SYS1-DBNDD2H3BUS1 97 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 H3BUT2 72 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 SMIM13P0DJ93 91 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 ATP5EP56381 51 aaPredicted RBP2.37□□□□□ -2.03
CASP4-213ENST00000534356 RPL39P62891 51 aaKnown RBP2.37□□□□□ -2.03
CASP4-213ENST00000534356 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 FAM213BQ8TBF2 198 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 TOMM6Q96B49 74 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 PRELID3AQ96N28 172 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 MRPL35Q9NZE8 188 aaKnown RBP2.37□□□□□ -2.03
CASP4-213ENST00000534356 UBE2D4Q9Y2X8 147 aa2.37□□□□□ -2.03
CASP4-213ENST00000534356 TRBV6-5A0A0K0K1A5 114 aa2.36□□□□□ -2.03
CASP4-213ENST00000534356 F2Z2F3 143 aa2.36□□□□□ -2.03
CASP4-213ENST00000534356 ATOX1O00244 68 aa2.36□□□□□ -2.03
CASP4-213ENST00000534356 ETDBQ3ZM63 59 aa2.36□□□□□ -2.03
CASP4-213ENST00000534356 TEN1Q86WV5 123 aa2.36□□□□□ -2.03
CASP4-213ENST00000534356 GNG13Q9P2W3 67 aa2.36□□□□□ -2.03
CASP4-213ENST00000534356 TRBV27A0A0K0K1C4 114 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 TRBV7-7A0A0K0K1E9 115 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 NDUFA1O15239 70 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 BCE1O60756 84 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 ACYP1P07311 99 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 KRTDAPP60985 99 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 TSKUQ8WUA8 353 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 C20orf78Q9BR46 151 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 CNFNQ9BYD5 112 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
CASP4-213ENST00000534356 IGKCP01834 107 aa2.34□□□□□ -2.03
CASP4-213ENST00000534356 HBBP68871 147 aa2.34□□□□□ -2.03
CASP4-213ENST00000534356 PRLHP81277 87 aa2.34□□□□□ -2.03
CASP4-213ENST00000534356 LCA10Q71F78 164 aa2.34□□□□□ -2.03
CASP4-213ENST00000534356 BAGE3Q86Y29 109 aa2.34□□□□□ -2.03
CASP4-213ENST00000534356 RPL28P46779 137 aaKnown RBP2.33□□□□□ -2.04
CASP4-213ENST00000534356 C2orf91Q6ZV80 131 aa2.33□□□□□ -2.04
CASP4-213ENST00000534356 MANBALQ9NQG1 85 aa2.33□□□□□ -2.04
CASP4-213ENST00000534356 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
CASP4-213ENST00000534356 A0A1B0GW54 56 aa2.32□□□□□ -2.04
CASP4-213ENST00000534356 NDUFC1O43677 76 aa2.32□□□□□ -2.04
CASP4-213ENST00000534356 NUPR1O60356 82 aa2.32□□□□□ -2.04
CASP4-213ENST00000534356 SRP19P09132 144 aaKnown RBP2.32□□□□□ -2.04
CASP4-213ENST00000534356 COX8AP10176 69 aa2.32□□□□□ -2.04
CASP4-213ENST00000534356 FCER1GP30273 86 aa2.32□□□□□ -2.04
CASP4-213ENST00000534356 PCOTHQ58A44 107 aa2.32□□□□□ -2.04
CASP4-213ENST00000534356 TOMM7Q9P0U1 55 aa2.32□□□□□ -2.04
CASP4-213ENST00000534356 NEBP20929 6669 aa2.32□□□□□ -2.04
CASP4-213ENST00000534356 M0R378 163 aa2.31□□□□□ -2.04
CASP4-213ENST00000534356 HBDP02042 147 aa2.31□□□□□ -2.04
CASP4-213ENST00000534356 KRTAP13-4Q3LI77 160 aa2.31□□□□□ -2.04
CASP4-213ENST00000534356 SERP2Q8N6R1 65 aa2.31□□□□□ -2.04
CASP4-213ENST00000534356 TRBV30A0A0K0K1B3 111 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 TMEM256-PLSCR3K7ERE1 68 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 M0R2T5 61 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 TCL1BO95988 128 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 C3orf79P0CE67 100 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 CKS2P33552 79 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 TMEM170BQ5T4T1 132 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 TIMM21Q9BVV7 248 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 NXT2Q9NPJ8 142 aaKnown RBP2.3□□□□□ -2.04
CASP4-213ENST00000534356 HIGD1BQ9P298 99 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 TP73-AS1Q9UF72 201 aa2.3□□□□□ -2.04
CASP4-213ENST00000534356 HIGD1CA8MV81 97 aa2.29□□□□□ -2.04
CASP4-213ENST00000534356 H3BPC8 53 aa2.29□□□□□ -2.04
CASP4-213ENST00000534356 NPYP01303 97 aa2.29□□□□□ -2.04
CASP4-213ENST00000534356 FP248Q71RG6 208 aaPredicted RBP2.29□□□□□ -2.04
CASP4-213ENST00000534356 LINC00643Q86TS7 51 aa2.29□□□□□ -2.04
CASP4-213ENST00000534356 SMCR5Q8TEV8 140 aa2.29□□□□□ -2.04
CASP4-213ENST00000534356 DSCR8Q96T75 97 aa2.29□□□□□ -2.04
CASP4-213ENST00000534356 A0A1B0GUT8 65 aa2.28□□□□□ -2.04
CASP4-213ENST00000534356 hADV29S1A0JD25 119 aa2.28□□□□□ -2.04
CASP4-213ENST00000534356 C11orf86A6NJI1 115 aa2.28□□□□□ -2.04
CASP4-213ENST00000534356 LEPROTO15243 131 aa2.28□□□□□ -2.04
CASP4-213ENST00000534356 TIMM17BO60830 172 aa2.28□□□□□ -2.04
CASP4-213ENST00000534356 C7orf65Q6ZTY9 151 aa2.28□□□□□ -2.04
CASP4-213ENST00000534356 CDKN2A-AS1Q9UH64 79 aa2.28□□□□□ -2.04
CASP4-213ENST00000534356 C9orf92A6NGG3 77 aa2.27□□□□□ -2.05
CASP4-213ENST00000534356 D6R8Y8 96 aa2.27□□□□□ -2.05
CASP4-213ENST00000534356 HIST1H4AP62805 103 aaKnown RBP2.27□□□□□ -2.05
CASP4-213ENST00000534356 ATP11AUNQ6ZP68 121 aa2.27□□□□□ -2.05
CASP4-213ENST00000534356 SPRR4Q96PI1 79 aa2.27□□□□□ -2.05
CASP4-213ENST00000534356 SMIM2Q9BVW6 85 aa2.27□□□□□ -2.05
CASP4-213ENST00000534356 V9GYV3 84 aa2.27□□□□□ -2.05
CASP4-213ENST00000534356 ERC2-IT1O76042 136 aa2.26□□□□□ -2.05
CASP4-213ENST00000534356 CHCHD1Q96BP2 118 aaKnown RBP2.26□□□□□ -2.05
CASP4-213ENST00000534356 OSTCQ9NRP0 149 aa2.26□□□□□ -2.05
CASP4-213ENST00000534356 F8VRH5 84 aa2.25□□□□□ -2.05
CASP4-213ENST00000534356 K7ERJ3 54 aa2.25□□□□□ -2.05
CASP4-213ENST00000534356 LINC01554Q52M75 96 aa2.25□□□□□ -2.05
CASP4-213ENST00000534356 SPAG11AQ6PDA7 123 aa2.25□□□□□ -2.05
CASP4-213ENST00000534356 Q8IZM0 81 aa2.25□□□□□ -2.05
CASP4-213ENST00000534356 TMEM141Q96I45 108 aa2.25□□□□□ -2.05
CASP4-213ENST00000534356 AMELXQ99217 191 aa2.25□□□□□ -2.05
CASP4-213ENST00000534356 SMIM7Q9BQ49 75 aa2.25□□□□□ -2.05
CASP4-213ENST00000534356 IGIPA6NJ69 53 aa2.24□□□□□ -2.05
CASP4-213ENST00000534356 CCKP06307 115 aa2.24□□□□□ -2.05
CASP4-213ENST00000534356 IFI27P40305 119 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms