RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 HRCT1Q6UXD1 115 aa6.48□□□□□ -1.37
CCDC90B-218ENST00000533761 ANAPC11Q9NYG5 84 aa6.48□□□□□ -1.37
CCDC90B-218ENST00000533761 A0A1W2PNM2 257 aa6.48□□□□□ -1.37
CCDC90B-218ENST00000533761 ATP5EP2Q5VTU8 51 aa6.48□□□□□ -1.37
CCDC90B-218ENST00000533761 LINC00643Q86TS7 51 aa6.48□□□□□ -1.37
CCDC90B-218ENST00000533761 LINC00846Q9NV44 126 aa6.48□□□□□ -1.37
CCDC90B-218ENST00000533761 FAM236DA0A1B0GTK5 79 aa6.47□□□□□ -1.37
CCDC90B-218ENST00000533761 OXTP01178 125 aa6.47□□□□□ -1.37
CCDC90B-218ENST00000533761 KRTAP1-4P0C5Y4 121 aa6.47□□□□□ -1.37
CCDC90B-218ENST00000533761 FAM236CP0DP71 79 aa6.47□□□□□ -1.37
CCDC90B-218ENST00000533761 NREPQ16612 68 aa6.47□□□□□ -1.37
CCDC90B-218ENST00000533761 TRBV7-7A0A0K0K1E9 115 aa6.45□□□□□ -1.38
CCDC90B-218ENST00000533761 Q5XG85 94 aa6.45□□□□□ -1.38
CCDC90B-218ENST00000533761 TYMSOSQ8TAI1 123 aa6.45□□□□□ -1.38
CCDC90B-218ENST00000533761 A0A087WSZ3 146 aa6.44□□□□□ -1.38
CCDC90B-218ENST00000533761 A0A087X002 238 aa6.44□□□□□ -1.38
CCDC90B-218ENST00000533761 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
CCDC90B-218ENST00000533761 Q6ZVQ6 151 aa6.43□□□□□ -1.38
CCDC90B-218ENST00000533761 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
CCDC90B-218ENST00000533761 LIMD2Q9BT23 127 aa6.42□□□□□ -1.38
CCDC90B-218ENST00000533761 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
CCDC90B-218ENST00000533761 UQCRQO14949 82 aa6.41□□□□□ -1.38
CCDC90B-218ENST00000533761 TMEM258P61165 79 aa6.41□□□□□ -1.38
CCDC90B-218ENST00000533761 CXCL6P80162 114 aa6.41□□□□□ -1.38
CCDC90B-218ENST00000533761 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
CCDC90B-218ENST00000533761 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
CCDC90B-218ENST00000533761 KRTAP13-2Q52LG2 175 aa6.4□□□□□ -1.38
CCDC90B-218ENST00000533761 PCLOQ9Y6V0 5065 aa6.4□□□□□ -1.39
CCDC90B-218ENST00000533761 A0A0G2JQZ4 141 aa6.4□□□□□ -1.39
CCDC90B-218ENST00000533761 BPY2O14599 106 aa6.4□□□□□ -1.39
CCDC90B-218ENST00000533761 SPINK1P00995 79 aa6.4□□□□□ -1.39
CCDC90B-218ENST00000533761 PRR26Q8N8Z3 221 aa6.4□□□□□ -1.39
CCDC90B-218ENST00000533761 IMUPQ9GZP8 106 aa6.4□□□□□ -1.39
CCDC90B-218ENST00000533761 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
CCDC90B-218ENST00000533761 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
CCDC90B-218ENST00000533761 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
CCDC90B-218ENST00000533761 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
CCDC90B-218ENST00000533761 PKHD1L1Q86WI1 4243 aa6.36□□□□□ -1.39
CCDC90B-218ENST00000533761 FAM236AA0A1B0GUQ0 79 aa6.36□□□□□ -1.39
CCDC90B-218ENST00000533761 FAM236BA0A1B0GV22 79 aa6.36□□□□□ -1.39
CCDC90B-218ENST00000533761 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
CCDC90B-218ENST00000533761 ASB16-AS1Q495Z4 193 aa6.35□□□□□ -1.39
CCDC90B-218ENST00000533761 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.39
CCDC90B-218ENST00000533761 IGKV3D-7A0A0C4DH55 119 aa6.34□□□□□ -1.39
CCDC90B-218ENST00000533761 A0A0U1RQV1 116 aa6.34□□□□□ -1.39
CCDC90B-218ENST00000533761 NDUFB1O75438 58 aa6.34□□□□□ -1.39
CCDC90B-218ENST00000533761 DMBT1Q9UGM3 2413 aaPredicted RBP6.33□□□□□ -1.4
CCDC90B-218ENST00000533761 HIST1H4AP62805 103 aaKnown RBP6.33□□□□□ -1.4
CCDC90B-218ENST00000533761 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
CCDC90B-218ENST00000533761 KRTAP5-11Q6L8G4 156 aa6.31□□□□□ -1.4
CCDC90B-218ENST00000533761 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
CCDC90B-218ENST00000533761 A8MWP4 228 aa6.29□□□□□ -1.4
CCDC90B-218ENST00000533761 FAT3Q8TDW7 4589 aa6.29□□□□□ -1.4
CCDC90B-218ENST00000533761 COX7CP15954 63 aa6.27□□□□□ -1.41
CCDC90B-218ENST00000533761 KRTAP10-7P60409 375 aaPredicted RBP6.27□□□□□ -1.41
CCDC90B-218ENST00000533761 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
CCDC90B-218ENST00000533761 DSCR10P59022 87 aa6.26□□□□□ -1.41
CCDC90B-218ENST00000533761 Q96NJ1 140 aa6.26□□□□□ -1.41
CCDC90B-218ENST00000533761 PRR15Q8IV56 129 aa6.25□□□□□ -1.41
CCDC90B-218ENST00000533761 K7EQZ3 153 aa6.24□□□□□ -1.41
CCDC90B-218ENST00000533761 SMIM26A0A096LP01 95 aa6.23□□□□□ -1.41
CCDC90B-218ENST00000533761 A0A1B0GVX0 72 aa6.23□□□□□ -1.41
CCDC90B-218ENST00000533761 Q8N9L7 120 aa6.23□□□□□ -1.41
CCDC90B-218ENST00000533761 TNXBP22105 4242 aa6.22□□□□□ -1.41
CCDC90B-218ENST00000533761 A0A087WVE0 104 aa6.22□□□□□ -1.41
CCDC90B-218ENST00000533761 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
CCDC90B-218ENST00000533761 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
CCDC90B-218ENST00000533761 SERP1Q9Y6X1 66 aa6.22□□□□□ -1.41
CCDC90B-218ENST00000533761 C8orf87E5RJ46 101 aa6.21□□□□□ -1.42
CCDC90B-218ENST00000533761 IGHV6-1A0A0B4J1U7 121 aa6.2□□□□□ -1.42
CCDC90B-218ENST00000533761 ATOX1O00244 68 aa6.2□□□□□ -1.42
CCDC90B-218ENST00000533761 CASC2Q6XLA1 102 aa6.18□□□□□ -1.42
CCDC90B-218ENST00000533761 FP248Q71RG6 208 aaPredicted RBP6.18□□□□□ -1.42
CCDC90B-218ENST00000533761 hDV103S1A0JD37 113 aa6.16□□□□□ -1.42
CCDC90B-218ENST00000533761 LINC00313P59037 77 aa6.16□□□□□ -1.42
CCDC90B-218ENST00000533761 C8orf17Q9NRJ1 99 aa6.16□□□□□ -1.42
CCDC90B-218ENST00000533761 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
CCDC90B-218ENST00000533761 MMP24-AS1A0A0U1RRL7 71 aa6.14□□□□□ -1.43
CCDC90B-218ENST00000533761 WFDC13Q8IUB5 93 aa6.14□□□□□ -1.43
CCDC90B-218ENST00000533761 TMEM254Q8TBM7 123 aa6.13□□□□□ -1.43
CCDC90B-218ENST00000533761 RETNLBQ9BQ08 111 aa6.12□□□□□ -1.43
CCDC90B-218ENST00000533761 HERC1Q15751 4861 aa6.12□□□□□ -1.43
CCDC90B-218ENST00000533761 PRR4Q16378 134 aa6.11□□□□□ -1.43
CCDC90B-218ENST00000533761 MRPL34Q9BQ48 92 aaKnown RBP6.11□□□□□ -1.43
CCDC90B-218ENST00000533761 TP53AIP1Q9HCN2 124 aa6.1□□□□□ -1.43
CCDC90B-218ENST00000533761 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
CCDC90B-218ENST00000533761 TRAV7A0A075B6U4 112 aa6.09□□□□□ -1.43
CCDC90B-218ENST00000533761 SERP2Q8N6R1 65 aa6.09□□□□□ -1.43
CCDC90B-218ENST00000533761 NDUFS5O43920 106 aa6.08□□□□□ -1.44
CCDC90B-218ENST00000533761 IGLV7-46A0A075B6I9 117 aa6.07□□□□□ -1.44
CCDC90B-218ENST00000533761 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
CCDC90B-218ENST00000533761 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
CCDC90B-218ENST00000533761 OCR1Q9BZK8 76 aa6.06□□□□□ -1.44
CCDC90B-218ENST00000533761 NOTCH2NLQ7Z3S9 236 aa6.04□□□□□ -1.44
CCDC90B-218ENST00000533761 MP68P56378 58 aa6.03□□□□□ -1.44
CCDC90B-218ENST00000533761 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
CCDC90B-218ENST00000533761 C9orf92A6NGG3 77 aa6.01□□□□□ -1.45
CCDC90B-218ENST00000533761 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
CCDC90B-218ENST00000533761 TRAV22A0A0B4J277 110 aa6.01□□□□□ -1.45
CCDC90B-218ENST00000533761 KRTAP16-1A8MUX0 517 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms