RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 K7EQZ3 153 aa5.84□□□□□ -1.47
CHKA-207ENST00000533728 TMEM254Q8TBM7 123 aa5.84□□□□□ -1.47
CHKA-207ENST00000533728 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
CHKA-207ENST00000533728 A8MWP4 228 aa5.83□□□□□ -1.48
CHKA-207ENST00000533728 DNAH8Q96JB1 4490 aa5.83□□□□□ -1.48
CHKA-207ENST00000533728 A0A0U1RQV1 116 aa5.82□□□□□ -1.48
CHKA-207ENST00000533728 PRR15Q8IV56 129 aa5.82□□□□□ -1.48
CHKA-207ENST00000533728 A0A0G2JQZ4 141 aa5.81□□□□□ -1.48
CHKA-207ENST00000533728 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
CHKA-207ENST00000533728 FAM229AH3BQW9 127 aa5.81□□□□□ -1.48
CHKA-207ENST00000533728 IGLV7-43P04211 117 aa5.81□□□□□ -1.48
CHKA-207ENST00000533728 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
CHKA-207ENST00000533728 C5orf47Q569G3 176 aa5.81□□□□□ -1.48
CHKA-207ENST00000533728 TNXBP22105 4242 aa5.8□□□□□ -1.48
CHKA-207ENST00000533728 CD164Q04900 197 aa5.8□□□□□ -1.48
CHKA-207ENST00000533728 Q6ZSA8 131 aa5.8□□□□□ -1.48
CHKA-207ENST00000533728 KRTAP10-2P60368 255 aa5.79□□□□□ -1.48
CHKA-207ENST00000533728 SNURFQ9Y675 71 aa5.79□□□□□ -1.48
CHKA-207ENST00000533728 NDUFB1O75438 58 aa5.78□□□□□ -1.48
CHKA-207ENST00000533728 SMR3BP02814 79 aaPredicted RBP5.78□□□□□ -1.48
CHKA-207ENST00000533728 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
CHKA-207ENST00000533728 H3BPC8 53 aa5.77□□□□□ -1.49
CHKA-207ENST00000533728 SSBP3-AS1Q7Z2R9 100 aa5.77□□□□□ -1.49
CHKA-207ENST00000533728 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.49
CHKA-207ENST00000533728 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
CHKA-207ENST00000533728 ZCCHC13Q8WW36 166 aaKnown RBP5.76□□□□□ -1.49
CHKA-207ENST00000533728 Q96NJ1 140 aa5.76□□□□□ -1.49
CHKA-207ENST00000533728 FAM30AQ9NZY2 134 aa5.76□□□□□ -1.49
CHKA-207ENST00000533728 MOBPQ13875 183 aa5.75□□□□□ -1.49
CHKA-207ENST00000533728 CASC2Q6XLA1 102 aa5.75□□□□□ -1.49
CHKA-207ENST00000533728 CIRBP-AS1Q8TBR5 109 aa5.75□□□□□ -1.49
CHKA-207ENST00000533728 ASB16-AS1Q495Z4 193 aa5.74□□□□□ -1.49
CHKA-207ENST00000533728 FAM229BQ4G0N7 80 aa5.74□□□□□ -1.49
CHKA-207ENST00000533728 MP68P56378 58 aa5.73□□□□□ -1.49
CHKA-207ENST00000533728 DEFB116Q30KQ4 102 aa5.73□□□□□ -1.49
CHKA-207ENST00000533728 MMP24-AS1A0A0U1RRL7 71 aa5.72□□□□□ -1.49
CHKA-207ENST00000533728 WFDC13Q8IUB5 93 aa5.72□□□□□ -1.49
CHKA-207ENST00000533728 OXTP01178 125 aa5.71□□□□□ -1.5
CHKA-207ENST00000533728 TP53AIP1Q9HCN2 124 aa5.71□□□□□ -1.5
CHKA-207ENST00000533728 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
CHKA-207ENST00000533728 KRTAP10-1P60331 282 aa5.7□□□□□ -1.5
CHKA-207ENST00000533728 Q5XG85 94 aa5.7□□□□□ -1.5
CHKA-207ENST00000533728 hDV103S1A0JD37 113 aa5.69□□□□□ -1.5
CHKA-207ENST00000533728 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
CHKA-207ENST00000533728 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
CHKA-207ENST00000533728 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
CHKA-207ENST00000533728 TRAV22A0A0B4J277 110 aa5.66□□□□□ -1.5
CHKA-207ENST00000533728 H0Y9P7 68 aa5.66□□□□□ -1.5
CHKA-207ENST00000533728 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
CHKA-207ENST00000533728 C8orf87E5RJ46 101 aa5.65□□□□□ -1.5
CHKA-207ENST00000533728 HRCT1Q6UXD1 115 aa5.65□□□□□ -1.5
CHKA-207ENST00000533728 ANAPC11Q9NYG5 84 aa5.65□□□□□ -1.5
CHKA-207ENST00000533728 MRPL34Q9BQ48 92 aaKnown RBP5.64□□□□□ -1.51
CHKA-207ENST00000533728 LINC00208Q96KT6 92 aa5.63□□□□□ -1.51
CHKA-207ENST00000533728 PLA2G1BP04054 148 aaKnown RBP5.62□□□□□ -1.51
CHKA-207ENST00000533728 IGHV6-1A0A0B4J1U7 121 aa5.61□□□□□ -1.51
CHKA-207ENST00000533728 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
CHKA-207ENST00000533728 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
CHKA-207ENST00000533728 C1orf64Q8NEQ6 169 aa5.61□□□□□ -1.51
CHKA-207ENST00000533728 LIMD2Q9BT23 127 aa5.61□□□□□ -1.51
CHKA-207ENST00000533728 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.6□□□□□ -1.51
CHKA-207ENST00000533728 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
CHKA-207ENST00000533728 A0A087X002 238 aa5.58□□□□□ -1.52
CHKA-207ENST00000533728 RPS29P62273 56 aaKnown RBP5.58□□□□□ -1.52
CHKA-207ENST00000533728 LPAP08519 4548 aa5.56□□□□□ -1.52
CHKA-207ENST00000533728 SPINK1P00995 79 aa5.55□□□□□ -1.52
CHKA-207ENST00000533728 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
CHKA-207ENST00000533728 C1orf195Q5TG92 126 aa5.55□□□□□ -1.52
CHKA-207ENST00000533728 SPAG11AQ6PDA7 123 aa5.55□□□□□ -1.52
CHKA-207ENST00000533728 FP248Q71RG6 208 aaPredicted RBP5.55□□□□□ -1.52
CHKA-207ENST00000533728 IGLV7-46A0A075B6I9 117 aa5.54□□□□□ -1.52
CHKA-207ENST00000533728 LOC101927531A0A1B0GV80 90 aa5.53□□□□□ -1.52
CHKA-207ENST00000533728 NDUFS5O43920 106 aa5.53□□□□□ -1.52
CHKA-207ENST00000533728 LINC00313P59037 77 aa5.53□□□□□ -1.52
CHKA-207ENST00000533728 NOTCH2NLQ7Z3S9 236 aa5.53□□□□□ -1.52
CHKA-207ENST00000533728 Q8N9P0 234 aaPredicted RBP5.53□□□□□ -1.52
CHKA-207ENST00000533728 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
CHKA-207ENST00000533728 KRTAP13-3Q3SY46 172 aa5.52□□□□□ -1.53
CHKA-207ENST00000533728 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
CHKA-207ENST00000533728 C4orf26Q17RF5 130 aa5.5□□□□□ -1.53
CHKA-207ENST00000533728 Q1T7F1 81 aa5.5□□□□□ -1.53
CHKA-207ENST00000533728 V9GYY9 64 aa5.5□□□□□ -1.53
CHKA-207ENST00000533728 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
CHKA-207ENST00000533728 KRTAP16-1A8MUX0 517 aa5.48□□□□□ -1.53
CHKA-207ENST00000533728 LINC00304Q8N9R0 145 aa5.47□□□□□ -1.53
CHKA-207ENST00000533728 Q5W150 140 aa5.45□□□□□ -1.54
CHKA-207ENST00000533728 PRR4Q16378 134 aa5.44□□□□□ -1.54
CHKA-207ENST00000533728 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
CHKA-207ENST00000533728 PRR26Q8N8Z3 221 aa5.42□□□□□ -1.54
CHKA-207ENST00000533728 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
CHKA-207ENST00000533728 COA5Q86WW8 74 aa5.41□□□□□ -1.54
CHKA-207ENST00000533728 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.54
CHKA-207ENST00000533728 ACYP2P14621 99 aa5.37□□□□□ -1.55
CHKA-207ENST00000533728 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
CHKA-207ENST00000533728 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
CHKA-207ENST00000533728 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
CHKA-207ENST00000533728 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
CHKA-207ENST00000533728 HRES1P13985 223 aa5.35□□□□□ -1.55
CHKA-207ENST00000533728 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
CHKA-207ENST00000533728 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms