RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 PCOTHQ58A44 107 aa8.85□□□□□ -0.99
RDX-214ENST00000533678 RPL37P61927 97 aaKnown RBP8.84□□□□□ -0.99
RDX-214ENST00000533678 J3KT08 172 aa8.83□□□□□ -1
RDX-214ENST00000533678 Q96NJ1 140 aa8.82□□□□□ -1
RDX-214ENST00000533678 NDUFB1O75438 58 aa8.81□□□□□ -1
RDX-214ENST00000533678 ETDBQ3ZM63 59 aa8.81□□□□□ -1
RDX-214ENST00000533678 LINC00472Q9H8W2 130 aa8.81□□□□□ -1
RDX-214ENST00000533678 CRCT1Q9UGL9 99 aa8.8□□□□□ -1
RDX-214ENST00000533678 A0A1B0GV90 55 aa8.79□□□□□ -1
RDX-214ENST00000533678 LCE2DQ5TA82 110 aaPredicted RBP8.79□□□□□ -1
RDX-214ENST00000533678 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
RDX-214ENST00000533678 LINC00313P59037 77 aa8.78□□□□□ -1
RDX-214ENST00000533678 DSCR10P59022 87 aa8.75□□□□□ -1.01
RDX-214ENST00000533678 Q75L30 129 aa8.75□□□□□ -1.01
RDX-214ENST00000533678 UBL5Q9BZL1 73 aa8.75□□□□□ -1.01
RDX-214ENST00000533678 FSIP2Q5CZC0 6907 aa8.75□□□□□ -1.01
RDX-214ENST00000533678 A0A1B0GVX0 72 aa8.73□□□□□ -1.01
RDX-214ENST00000533678 BPY2O14599 106 aa8.72□□□□□ -1.01
RDX-214ENST00000533678 C8orf87E5RJ46 101 aa8.71□□□□□ -1.02
RDX-214ENST00000533678 ATP11AUNQ6ZP68 121 aa8.71□□□□□ -1.02
RDX-214ENST00000533678 A8MWP4 228 aa8.69□□□□□ -1.02
RDX-214ENST00000533678 Q6ZVQ6 151 aa8.69□□□□□ -1.02
RDX-214ENST00000533678 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
RDX-214ENST00000533678 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
RDX-214ENST00000533678 A8MUU9 505 aa8.65□□□□□ -1.02
RDX-214ENST00000533678 ACYP1P07311 99 aa8.64□□□□□ -1.03
RDX-214ENST00000533678 IGKV3D-7A0A0C4DH55 119 aa8.63□□□□□ -1.03
RDX-214ENST00000533678 KRTAP19-2Q3LHN2 52 aa8.63□□□□□ -1.03
RDX-214ENST00000533678 LCE2CQ5TA81 110 aa8.63□□□□□ -1.03
RDX-214ENST00000533678 PRR15Q8IV56 129 aa8.62□□□□□ -1.03
RDX-214ENST00000533678 C8orf17Q9NRJ1 99 aa8.61□□□□□ -1.03
RDX-214ENST00000533678 NOTCH2NLQ7Z3S9 236 aa8.6□□□□□ -1.03
RDX-214ENST00000533678 K7EQZ3 153 aa8.59□□□□□ -1.03
RDX-214ENST00000533678 J3QR89 54 aa8.57□□□□□ -1.04
RDX-214ENST00000533678 KRTAP16-1A8MUX0 517 aa8.56□□□□□ -1.04
RDX-214ENST00000533678 FAM240AA0A1B0GVK7 77 aa8.54□□□□□ -1.04
RDX-214ENST00000533678 Q8N9L7 120 aa8.54□□□□□ -1.04
RDX-214ENST00000533678 hDV103S1A0JD37 113 aa8.53□□□□□ -1.04
RDX-214ENST00000533678 NDUFS5O43920 106 aa8.53□□□□□ -1.04
RDX-214ENST00000533678 MT1HP80294 61 aa8.53□□□□□ -1.04
RDX-214ENST00000533678 COX6B2Q6YFQ2 88 aa8.53□□□□□ -1.04
RDX-214ENST00000533678 CXCL6P80162 114 aa8.51□□□□□ -1.05
RDX-214ENST00000533678 TMEM254Q8TBM7 123 aa8.51□□□□□ -1.05
RDX-214ENST00000533678 MRPL34Q9BQ48 92 aaKnown RBP8.51□□□□□ -1.05
RDX-214ENST00000533678 MMP24-AS1A0A0U1RRL7 71 aa8.5□□□□□ -1.05
RDX-214ENST00000533678 CASC2Q6XLA1 102 aa8.5□□□□□ -1.05
RDX-214ENST00000533678 WFDC13Q8IUB5 93 aa8.5□□□□□ -1.05
RDX-214ENST00000533678 Q8N9P0 234 aaPredicted RBP8.46□□□□□ -1.06
RDX-214ENST00000533678 HCG22E2RYF7 251 aa8.45□□□□□ -1.06
RDX-214ENST00000533678 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
RDX-214ENST00000533678 ZCCHC13Q8WW36 166 aaKnown RBP8.44□□□□□ -1.06
RDX-214ENST00000533678 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
RDX-214ENST00000533678 FLGP20930 4061 aaPredicted RBP8.43□□□□□ -1.06
RDX-214ENST00000533678 LINC00643Q86TS7 51 aa8.42□□□□□ -1.06
RDX-214ENST00000533678 M0R2T5 61 aa8.41□□□□□ -1.06
RDX-214ENST00000533678 K7ERU9 68 aa8.37□□□□□ -1.07
RDX-214ENST00000533678 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
RDX-214ENST00000533678 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
RDX-214ENST00000533678 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
RDX-214ENST00000533678 HRES1P13985 223 aa8.3□□□□□ -1.08
RDX-214ENST00000533678 SPINK7P58062 85 aa8.3□□□□□ -1.08
RDX-214ENST00000533678 TP53AIP1Q9HCN2 124 aa8.3□□□□□ -1.08
RDX-214ENST00000533678 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
RDX-214ENST00000533678 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
RDX-214ENST00000533678 MPLKIPQ8TAP9 179 aa8.29□□□□□ -1.08
RDX-214ENST00000533678 KRTAP9-7A8MTY7 169 aa8.27□□□□□ -1.09
RDX-214ENST00000533678 IGKV2D-30A0A075B6S6 120 aa8.25□□□□□ -1.09
RDX-214ENST00000533678 IGKV2-30P06310 120 aa8.25□□□□□ -1.09
RDX-214ENST00000533678 A0A087WVE0 104 aa8.24□□□□□ -1.09
RDX-214ENST00000533678 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.24□□□□□ -1.09
RDX-214ENST00000533678 Q5W150 140 aa8.22□□□□□ -1.09
RDX-214ENST00000533678 C7orf65Q6ZTY9 151 aa8.22□□□□□ -1.09
RDX-214ENST00000533678 SCGB1A1P11684 91 aa8.19□□□□□ -1.1
RDX-214ENST00000533678 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
RDX-214ENST00000533678 UQCRQO14949 82 aa8.15□□□□□ -1.1
RDX-214ENST00000533678 IMUPQ9GZP8 106 aa8.13□□□□□ -1.11
RDX-214ENST00000533678 ATOX1O00244 68 aa8.1□□□□□ -1.11
RDX-214ENST00000533678 MT-ATP8P03928 68 aa8.1□□□□□ -1.11
RDX-214ENST00000533678 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
RDX-214ENST00000533678 H0Y9P7 68 aa8.09□□□□□ -1.11
RDX-214ENST00000533678 LOC101927531A0A1B0GV80 90 aa8.06□□□□□ -1.12
RDX-214ENST00000533678 MP68P56378 58 aa8.06□□□□□ -1.12
RDX-214ENST00000533678 C4orf26Q17RF5 130 aa8.03□□□□□ -1.12
RDX-214ENST00000533678 C5orf47Q569G3 176 aa8.01□□□□□ -1.13
RDX-214ENST00000533678 FAM236AA0A1B0GUQ0 79 aa8□□□□□ -1.13
RDX-214ENST00000533678 FAM236BA0A1B0GV22 79 aa8□□□□□ -1.13
RDX-214ENST00000533678 C1orf64Q8NEQ6 169 aa8□□□□□ -1.13
RDX-214ENST00000533678 LINC00208Q96KT6 92 aa8□□□□□ -1.13
RDX-214ENST00000533678 OCR1Q9BZK8 76 aa8□□□□□ -1.13
RDX-214ENST00000533678 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
RDX-214ENST00000533678 USH2AO75445 5202 aa8□□□□□ -1.13
RDX-214ENST00000533678 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
RDX-214ENST00000533678 SMIM20Q8N5G0 67 aa7.99□□□□□ -1.13
RDX-214ENST00000533678 MT2AP02795 61 aa7.98□□□□□ -1.13
RDX-214ENST00000533678 H1FX-AS1Q4G0G2 97 aa7.98□□□□□ -1.13
RDX-214ENST00000533678 H3BPC8 53 aa7.93□□□□□ -1.14
RDX-214ENST00000533678 KRTAP10-10P60014 251 aa7.91□□□□□ -1.14
RDX-214ENST00000533678 TRAV7A0A075B6U4 112 aa7.9□□□□□ -1.14
RDX-214ENST00000533678 MT1FP04733 61 aa7.9□□□□□ -1.14
RDX-214ENST00000533678 FCGBPQ9Y6R7 5405 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 200.1 ms