RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 Q8N9P0 234 aaPredicted RBP7.48□□□□□ -1.21
RAD50-209ENST00000533482 SRRM2Q9UQ35 2752 aaKnown RBP7.45□□□□□ -1.22
RAD50-209ENST00000533482 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
RAD50-209ENST00000533482 Q6ZR54 194 aa7.44□□□□□ -1.22
RAD50-209ENST00000533482 CD164Q04900 197 aa7.43□□□□□ -1.22
RAD50-209ENST00000533482 HRES1P13985 223 aa7.42□□□□□ -1.22
RAD50-209ENST00000533482 Q1T7F1 81 aa7.41□□□□□ -1.22
RAD50-209ENST00000533482 UQCR11O14957 56 aa7.41□□□□□ -1.22
RAD50-209ENST00000533482 Q6ZRN7 208 aaPredicted RBP7.41□□□□□ -1.22
RAD50-209ENST00000533482 TRRAPQ9Y4A5 3859 aa7.37□□□□□ -1.23
RAD50-209ENST00000533482 A0A087X002 238 aa7.37□□□□□ -1.23
RAD50-209ENST00000533482 NOTCH2NLQ7Z3S9 236 aa7.37□□□□□ -1.23
RAD50-209ENST00000533482 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
RAD50-209ENST00000533482 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
RAD50-209ENST00000533482 LCE6AA0A183 80 aa7.33□□□□□ -1.24
RAD50-209ENST00000533482 Q5W150 140 aa7.32□□□□□ -1.24
RAD50-209ENST00000533482 LINC00483Q53H64 154 aa7.31□□□□□ -1.24
RAD50-209ENST00000533482 ZCCHC13Q8WW36 166 aaKnown RBP7.3□□□□□ -1.24
RAD50-209ENST00000533482 Q5VV11 94 aa7.29□□□□□ -1.24
RAD50-209ENST00000533482 CDC42SE1Q9NRR8 79 aa7.29□□□□□ -1.24
RAD50-209ENST00000533482 VPS13CQ709C8 3753 aa7.28□□□□□ -1.24
RAD50-209ENST00000533482 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
RAD50-209ENST00000533482 SPINK7P58062 85 aa7.24□□□□□ -1.25
RAD50-209ENST00000533482 Q5VSD8 79 aa7.24□□□□□ -1.25
RAD50-209ENST00000533482 LINC01558Q9Y6Z2 57 aa7.24□□□□□ -1.25
RAD50-209ENST00000533482 Q75L30 129 aa7.23□□□□□ -1.25
RAD50-209ENST00000533482 KTN1-AS1Q86SY8 53 aa7.23□□□□□ -1.25
RAD50-209ENST00000533482 A0A0D9SG42 100 aa7.22□□□□□ -1.25
RAD50-209ENST00000533482 KRTAP13-1Q8IUC0 172 aa7.22□□□□□ -1.25
RAD50-209ENST00000533482 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
RAD50-209ENST00000533482 Q6ZSA8 131 aa7.16□□□□□ -1.26
RAD50-209ENST00000533482 FBN3Q75N90 2809 aa7.16□□□□□ -1.26
RAD50-209ENST00000533482 KRTAP13-2Q52LG2 175 aa7.15□□□□□ -1.27
RAD50-209ENST00000533482 RBM12B-AS1Q9P1G2 102 aa7.13□□□□□ -1.27
RAD50-209ENST00000533482 PRAC1Q96KF2 57 aa7.12□□□□□ -1.27
RAD50-209ENST00000533482 A0A1B0GU33 70 aa7.11□□□□□ -1.27
RAD50-209ENST00000533482 ZNF469Q96JG9 3925 aaPredicted RBP7.1□□□□□ -1.27
RAD50-209ENST00000533482 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
RAD50-209ENST00000533482 A8MU10 97 aa7.1□□□□□ -1.27
RAD50-209ENST00000533482 ANK3Q12955 4377 aaKnown RBP7.09□□□□□ -1.27
RAD50-209ENST00000533482 LCA10Q71F78 164 aa7.09□□□□□ -1.27
RAD50-209ENST00000533482 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
RAD50-209ENST00000533482 COL7A1Q02388 2944 aa7.05□□□□□ -1.28
RAD50-209ENST00000533482 CRIPTQ9P021 101 aa6.99□□□□□ -1.29
RAD50-209ENST00000533482 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
RAD50-209ENST00000533482 MEGF8Q7Z7M0 2845 aa6.96□□□□□ -1.3
RAD50-209ENST00000533482 KRTAP21-3Q3LHN1 58 aa6.94□□□□□ -1.3
RAD50-209ENST00000533482 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
RAD50-209ENST00000533482 SPATA8Q6RVD6 105 aa6.92□□□□□ -1.3
RAD50-209ENST00000533482 S4R3F8 94 aa6.91□□□□□ -1.3
RAD50-209ENST00000533482 KRTAP1-4P0C5Y4 121 aa6.9□□□□□ -1.31
RAD50-209ENST00000533482 M0R2T5 61 aa6.89□□□□□ -1.31
RAD50-209ENST00000533482 CSMD3Q7Z407 3707 aa6.86□□□□□ -1.31
RAD50-209ENST00000533482 SEC61BP60468 96 aaKnown RBP6.83□□□□□ -1.32
RAD50-209ENST00000533482 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
RAD50-209ENST00000533482 ADM2Q7Z4H4 148 aa6.81□□□□□ -1.32
RAD50-209ENST00000533482 A6NN06 94 aa6.79□□□□□ -1.32
RAD50-209ENST00000533482 CAMK2N1Q7Z7J9 78 aa6.79□□□□□ -1.32
RAD50-209ENST00000533482 R4GN34 69 aa6.78□□□□□ -1.32
RAD50-209ENST00000533482 RPS29P62273 56 aaKnown RBP6.78□□□□□ -1.32
RAD50-209ENST00000533482 RPL37P61927 97 aaKnown RBP6.77□□□□□ -1.33
RAD50-209ENST00000533482 A8MUU9 505 aa6.7□□□□□ -1.34
RAD50-209ENST00000533482 M0QZ58 72 aa6.7□□□□□ -1.34
RAD50-209ENST00000533482 KRTAP16-1A8MUX0 517 aa6.69□□□□□ -1.34
RAD50-209ENST00000533482 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
RAD50-209ENST00000533482 ROMO1P60602 79 aa6.66□□□□□ -1.34
RAD50-209ENST00000533482 AKAP9Q99996 3911 aa6.63□□□□□ -1.35
RAD50-209ENST00000533482 XP32Q5T750 250 aa6.6□□□□□ -1.35
RAD50-209ENST00000533482 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
RAD50-209ENST00000533482 A0A1B0GVY2 172 aa6.56□□□□□ -1.36
RAD50-209ENST00000533482 HUWE1Q7Z6Z7 4374 aaKnown RBP6.53□□□□□ -1.36
RAD50-209ENST00000533482 H0YAA0 97 aa6.5□□□□□ -1.37
RAD50-209ENST00000533482 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
RAD50-209ENST00000533482 H3BS24 57 aa6.48□□□□□ -1.37
RAD50-209ENST00000533482 DNHD1Q96M86 4753 aa6.48□□□□□ -1.37
RAD50-209ENST00000533482 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
RAD50-209ENST00000533482 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
RAD50-209ENST00000533482 P0C880 135 aa6.39□□□□□ -1.39
RAD50-209ENST00000533482 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
RAD50-209ENST00000533482 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
RAD50-209ENST00000533482 PLAC4Q8WY50 150 aa6.32□□□□□ -1.4
RAD50-209ENST00000533482 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
RAD50-209ENST00000533482 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
RAD50-209ENST00000533482 PLECQ15149 4684 aaKnown RBP6.29□□□□□ -1.4
RAD50-209ENST00000533482 DNAH10Q8IVF4 4471 aa6.29□□□□□ -1.4
RAD50-209ENST00000533482 DNAH11Q96DT5 4516 aa6.22□□□□□ -1.41
RAD50-209ENST00000533482 NDUFAF8A1L188 74 aa6.2□□□□□ -1.42
RAD50-209ENST00000533482 DNAH5Q8TE73 4624 aa6.16□□□□□ -1.42
RAD50-209ENST00000533482 DNAH1Q9P2D7 4330 aa6.16□□□□□ -1.42
RAD50-209ENST00000533482 KRTAP4-5Q9BYR2 181 aa6.15□□□□□ -1.43
RAD50-209ENST00000533482 STARD9Q9P2P6 4700 aa6.12□□□□□ -1.43
RAD50-209ENST00000533482 PRKDCP78527 4128 aaKnown RBP6.12□□□□□ -1.43
RAD50-209ENST00000533482 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
RAD50-209ENST00000533482 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
RAD50-209ENST00000533482 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
RAD50-209ENST00000533482 FAT1Q14517 4588 aa6.09□□□□□ -1.43
RAD50-209ENST00000533482 KRTAP10-10P60014 251 aa6.09□□□□□ -1.44
RAD50-209ENST00000533482 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
RAD50-209ENST00000533482 TNP1P09430 55 aa6.07□□□□□ -1.44
RAD50-209ENST00000533482 KRTAP10-6P60371 365 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms