RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 M0R2T5 61 aa12.18□□□□□ -0.46
PKP3-210ENST00000533249 C21orf62-AS1Q17RA5 79 aa12.18□□□□□ -0.46
PKP3-210ENST00000533249 COX6B2Q6YFQ2 88 aa12.16□□□□□ -0.46
PKP3-210ENST00000533249 Q6ZQT0 140 aa12.15□□□□□ -0.46
PKP3-210ENST00000533249 A0A1W2PNM2 257 aa12.13□□□□□ -0.47
PKP3-210ENST00000533249 TRBV7-7A0A0K0K1E9 115 aa12.1□□□□□ -0.47
PKP3-210ENST00000533249 Q6Q795 121 aa12.1□□□□□ -0.47
PKP3-210ENST00000533249 A0A087WSZ3 146 aa12.06□□□□□ -0.48
PKP3-210ENST00000533249 SS18L2Q9UHA2 77 aa12.06□□□□□ -0.48
PKP3-210ENST00000533249 A0A1B0GW54 56 aa12.03□□□□□ -0.48
PKP3-210ENST00000533249 FLGP20930 4061 aaPredicted RBP12.01□□□□□ -0.49
PKP3-210ENST00000533249 J3QR89 54 aa11.98□□□□□ -0.49
PKP3-210ENST00000533249 NREPQ16612 68 aa11.94□□□□□ -0.5
PKP3-210ENST00000533249 ACYP1P07311 99 aa11.92□□□□□ -0.5
PKP3-210ENST00000533249 ATP11AUNQ6ZP68 121 aa11.92□□□□□ -0.5
PKP3-210ENST00000533249 UBL5Q9BZL1 73 aa11.9□□□□□ -0.5
PKP3-210ENST00000533249 Q75L30 129 aa11.88□□□□□ -0.51
PKP3-210ENST00000533249 LINC00846Q9NV44 126 aa11.87□□□□□ -0.51
PKP3-210ENST00000533249 FAM240AA0A1B0GVK7 77 aa11.86□□□□□ -0.51
PKP3-210ENST00000533249 K7ERU9 68 aa11.84□□□□□ -0.51
PKP3-210ENST00000533249 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
PKP3-210ENST00000533249 DEFB116Q30KQ4 102 aa11.83□□□□□ -0.52
PKP3-210ENST00000533249 Q6ZVQ6 151 aa11.83□□□□□ -0.52
PKP3-210ENST00000533249 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
PKP3-210ENST00000533249 J3KT08 172 aa11.81□□□□□ -0.52
PKP3-210ENST00000533249 Q96NJ1 140 aa11.81□□□□□ -0.52
PKP3-210ENST00000533249 LINC00472Q9H8W2 130 aa11.81□□□□□ -0.52
PKP3-210ENST00000533249 BPY2O14599 106 aa11.78□□□□□ -0.52
PKP3-210ENST00000533249 NDUFB1O75438 58 aa11.74□□□□□ -0.53
PKP3-210ENST00000533249 C20orf166-AS1Q96NR2 134 aa11.7□□□□□ -0.54
PKP3-210ENST00000533249 A8MUU9 505 aa11.67□□□□□ -0.54
PKP3-210ENST00000533249 A8MWP4 228 aa11.67□□□□□ -0.54
PKP3-210ENST00000533249 LINC00643Q86TS7 51 aa11.67□□□□□ -0.54
PKP3-210ENST00000533249 IGHV6-1A0A0B4J1U7 121 aa11.66□□□□□ -0.54
PKP3-210ENST00000533249 KRTAP9-8Q9BYQ0 159 aa11.66□□□□□ -0.54
PKP3-210ENST00000533249 IGKV3D-7A0A0C4DH55 119 aa11.64□□□□□ -0.55
PKP3-210ENST00000533249 A0A1B0GVX0 72 aa11.64□□□□□ -0.55
PKP3-210ENST00000533249 CXCL6P80162 114 aa11.64□□□□□ -0.55
PKP3-210ENST00000533249 ATP5EP2Q5VTU8 51 aa11.64□□□□□ -0.55
PKP3-210ENST00000533249 DSCR10P59022 87 aa11.63□□□□□ -0.55
PKP3-210ENST00000533249 PRR15Q8IV56 129 aa11.6□□□□□ -0.55
PKP3-210ENST00000533249 USH2AO75445 5202 aa11.59□□□□□ -0.55
PKP3-210ENST00000533249 LINC00313P59037 77 aa11.59□□□□□ -0.55
PKP3-210ENST00000533249 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.58□□□□□ -0.56
PKP3-210ENST00000533249 C8orf87E5RJ46 101 aa11.58□□□□□ -0.56
PKP3-210ENST00000533249 K7EQZ3 153 aa11.58□□□□□ -0.56
PKP3-210ENST00000533249 Q8N9L7 120 aa11.58□□□□□ -0.56
PKP3-210ENST00000533249 SSPOA2VEC9 5147 aa11.57□□□□□ -0.56
PKP3-210ENST00000533249 KRTAP9-7A8MTY7 169 aa11.55□□□□□ -0.56
PKP3-210ENST00000533249 HIST1H4AP62805 103 aaKnown RBP11.53□□□□□ -0.56
PKP3-210ENST00000533249 C8orf17Q9NRJ1 99 aa11.52□□□□□ -0.57
PKP3-210ENST00000533249 FAM236DA0A1B0GTK5 79 aa11.51□□□□□ -0.57
PKP3-210ENST00000533249 FAM236CP0DP71 79 aa11.51□□□□□ -0.57
PKP3-210ENST00000533249 KRTAP16-1A8MUX0 517 aa11.49□□□□□ -0.57
PKP3-210ENST00000533249 NOTCH2NLQ7Z3S9 236 aa11.48□□□□□ -0.57
PKP3-210ENST00000533249 MT2AP02795 61 aa11.47□□□□□ -0.57
PKP3-210ENST00000533249 MMP24-AS1A0A0U1RRL7 71 aa11.44□□□□□ -0.58
PKP3-210ENST00000533249 hDV103S1A0JD37 113 aa11.44□□□□□ -0.58
PKP3-210ENST00000533249 WFDC13Q8IUB5 93 aa11.44□□□□□ -0.58
PKP3-210ENST00000533249 HCG22E2RYF7 251 aa11.43□□□□□ -0.58
PKP3-210ENST00000533249 CASC2Q6XLA1 102 aa11.43□□□□□ -0.58
PKP3-210ENST00000533249 MT-ATP8P03928 68 aa11.42□□□□□ -0.58
PKP3-210ENST00000533249 TMEM254Q8TBM7 123 aa11.4□□□□□ -0.58
PKP3-210ENST00000533249 RBM12B-AS1Q9P1G2 102 aa11.4□□□□□ -0.58
PKP3-210ENST00000533249 MT1FP04733 61 aa11.38□□□□□ -0.59
PKP3-210ENST00000533249 HRES1P13985 223 aa11.38□□□□□ -0.59
PKP3-210ENST00000533249 MRPL34Q9BQ48 92 aaKnown RBP11.38□□□□□ -0.59
PKP3-210ENST00000533249 A0A087WVE0 104 aa11.36□□□□□ -0.59
PKP3-210ENST00000533249 NDUFS5O43920 106 aa11.36□□□□□ -0.59
PKP3-210ENST00000533249 MPLKIPQ8TAP9 179 aa11.36□□□□□ -0.59
PKP3-210ENST00000533249 IMUPQ9GZP8 106 aa11.36□□□□□ -0.59
PKP3-210ENST00000533249 FCGBPQ9Y6R7 5405 aaPredicted RBP11.35□□□□□ -0.59
PKP3-210ENST00000533249 LCE2BO14633 110 aa11.35□□□□□ -0.59
PKP3-210ENST00000533249 KRTAP10-10P60014 251 aa11.33□□□□□ -0.6
PKP3-210ENST00000533249 KRTAP19-1Q8IUB9 90 aa11.32□□□□□ -0.6
PKP3-210ENST00000533249 KRTAP9-3Q9BYQ3 159 aa11.3□□□□□ -0.6
PKP3-210ENST00000533249 Q8N9P0 234 aaPredicted RBP11.28□□□□□ -0.6
PKP3-210ENST00000533249 SCGB1A1P11684 91 aa11.25□□□□□ -0.61
PKP3-210ENST00000533249 TP53AIP1Q9HCN2 124 aa11.18□□□□□ -0.62
PKP3-210ENST00000533249 FAM236AA0A1B0GUQ0 79 aa11.17□□□□□ -0.62
PKP3-210ENST00000533249 FAM236BA0A1B0GV22 79 aa11.17□□□□□ -0.62
PKP3-210ENST00000533249 ZCCHC13Q8WW36 166 aaKnown RBP11.16□□□□□ -0.62
PKP3-210ENST00000533249 SPINK7P58062 85 aa11.12□□□□□ -0.63
PKP3-210ENST00000533249 UQCRQO14949 82 aa11.09□□□□□ -0.63
PKP3-210ENST00000533249 ATOX1O00244 68 aa11.05□□□□□ -0.64
PKP3-210ENST00000533249 SMIM20Q8N5G0 67 aa11.05□□□□□ -0.64
PKP3-210ENST00000533249 Q5W150 140 aa11.03□□□□□ -0.64
PKP3-210ENST00000533249 OCR1Q9BZK8 76 aa11.03□□□□□ -0.64
PKP3-210ENST00000533249 MACF1Q9UPN3 7388 aaKnown RBP11.02□□□□□ -0.64
PKP3-210ENST00000533249 TRAV22A0A0B4J277 110 aa11.01□□□□□ -0.65
PKP3-210ENST00000533249 KRTAP19-6Q3LI70 58 aa10.99□□□□□ -0.65
PKP3-210ENST00000533249 H0Y9P7 68 aa10.98□□□□□ -0.65
PKP3-210ENST00000533249 TRAV7A0A075B6U4 112 aa10.97□□□□□ -0.65
PKP3-210ENST00000533249 MP68P56378 58 aa10.97□□□□□ -0.65
PKP3-210ENST00000533249 IGKV2D-30A0A075B6S6 120 aa10.95□□□□□ -0.66
PKP3-210ENST00000533249 IGKV2-30P06310 120 aa10.95□□□□□ -0.66
PKP3-210ENST00000533249 C5orf47Q569G3 176 aa10.95□□□□□ -0.66
PKP3-210ENST00000533249 SYNE2Q8WXH0 6885 aaKnown RBP10.94□□□□□ -0.66
PKP3-210ENST00000533249 C7orf65Q6ZTY9 151 aa10.91□□□□□ -0.66
PKP3-210ENST00000533249 LOC101927531A0A1B0GV80 90 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms