RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 NAA38Q9BRA0 125 aaKnown RBP5.73□□□□□ -1.49
CMTM1-216ENST00000533078 COX6CP09669 75 aa5.72□□□□□ -1.49
CMTM1-216ENST00000533078 K7ERU9 68 aa5.71□□□□□ -1.5
CMTM1-216ENST00000533078 NDUFV3P56181 108 aaKnown RBP5.71□□□□□ -1.5
CMTM1-216ENST00000533078 PRO0461Q9UI25 63 aa5.71□□□□□ -1.5
CMTM1-216ENST00000533078 H3BMG7 143 aa5.7□□□□□ -1.5
CMTM1-216ENST00000533078 SCGB1C2P0DMR2 95 aa5.7□□□□□ -1.5
CMTM1-216ENST00000533078 HRES1P13985 223 aa5.7□□□□□ -1.5
CMTM1-216ENST00000533078 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
CMTM1-216ENST00000533078 PSMB2P49721 201 aa5.69□□□□□ -1.5
CMTM1-216ENST00000533078 ATXN8Q156A1 80 aa5.69□□□□□ -1.5
CMTM1-216ENST00000533078 MPLKIPQ8TAP9 179 aa5.69□□□□□ -1.5
CMTM1-216ENST00000533078 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
CMTM1-216ENST00000533078 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
CMTM1-216ENST00000533078 H0YGX0 51 aa5.67□□□□□ -1.5
CMTM1-216ENST00000533078 J3QR89 54 aa5.67□□□□□ -1.5
CMTM1-216ENST00000533078 TRIAP1O43715 76 aa5.66□□□□□ -1.5
CMTM1-216ENST00000533078 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
CMTM1-216ENST00000533078 A8MWP4 228 aa5.64□□□□□ -1.51
CMTM1-216ENST00000533078 IGHV6-1A0A0B4J1U7 121 aa5.63□□□□□ -1.51
CMTM1-216ENST00000533078 H3BT86 120 aa5.63□□□□□ -1.51
CMTM1-216ENST00000533078 TRACP01848 142 aa5.63□□□□□ -1.51
CMTM1-216ENST00000533078 SMCPP49901 116 aaPredicted RBP5.63□□□□□ -1.51
CMTM1-216ENST00000533078 A0A1B0GX51 115 aa5.62□□□□□ -1.51
CMTM1-216ENST00000533078 ETDBQ3ZM63 59 aa5.62□□□□□ -1.51
CMTM1-216ENST00000533078 ANKRD29Q8N6D5 301 aa5.62□□□□□ -1.51
CMTM1-216ENST00000533078 TRBV7-4A0A0J9YYF1 115 aa5.61□□□□□ -1.51
CMTM1-216ENST00000533078 A0A1W2PNM2 257 aa5.61□□□□□ -1.51
CMTM1-216ENST00000533078 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
CMTM1-216ENST00000533078 C9JAW5 83 aa5.6□□□□□ -1.51
CMTM1-216ENST00000533078 C8orf87E5RJ46 101 aa5.59□□□□□ -1.51
CMTM1-216ENST00000533078 DEFB116Q30KQ4 102 aa5.59□□□□□ -1.51
CMTM1-216ENST00000533078 FAM218AQ96MZ4 157 aa5.59□□□□□ -1.51
CMTM1-216ENST00000533078 H3BQ85 93 aa5.58□□□□□ -1.52
CMTM1-216ENST00000533078 DNAL4O96015 105 aa5.58□□□□□ -1.52
CMTM1-216ENST00000533078 SPINK7P58062 85 aa5.57□□□□□ -1.52
CMTM1-216ENST00000533078 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
CMTM1-216ENST00000533078 A0A1B0GV72 72 aa5.56□□□□□ -1.52
CMTM1-216ENST00000533078 VPS25Q9BRG1 176 aa5.56□□□□□ -1.52
CMTM1-216ENST00000533078 LINC00472Q9H8W2 130 aa5.56□□□□□ -1.52
CMTM1-216ENST00000533078 A0A1B0GVX0 72 aa5.55□□□□□ -1.52
CMTM1-216ENST00000533078 CCKP06307 115 aa5.55□□□□□ -1.52
CMTM1-216ENST00000533078 Q8N9P0 234 aaPredicted RBP5.55□□□□□ -1.52
CMTM1-216ENST00000533078 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
CMTM1-216ENST00000533078 WFDC13Q8IUB5 93 aa5.54□□□□□ -1.52
CMTM1-216ENST00000533078 ORMDL1Q9P0S3 153 aa5.54□□□□□ -1.52
CMTM1-216ENST00000533078 FAM240AA0A1B0GVK7 77 aa5.53□□□□□ -1.52
CMTM1-216ENST00000533078 TMEM256-PLSCR3K7ERE1 68 aa5.52□□□□□ -1.53
CMTM1-216ENST00000533078 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
CMTM1-216ENST00000533078 NEBP20929 6669 aa5.51□□□□□ -1.53
CMTM1-216ENST00000533078 ACYP1P07311 99 aa5.51□□□□□ -1.53
CMTM1-216ENST00000533078 J3KT08 172 aa5.5□□□□□ -1.53
CMTM1-216ENST00000533078 NDUFB1O75438 58 aa5.49□□□□□ -1.53
CMTM1-216ENST00000533078 SCGB1A1P11684 91 aa5.49□□□□□ -1.53
CMTM1-216ENST00000533078 C21orf62-AS1Q17RA5 79 aa5.49□□□□□ -1.53
CMTM1-216ENST00000533078 DSCR8Q96T75 97 aa5.49□□□□□ -1.53
CMTM1-216ENST00000533078 JMJD7-PLA2G4BH0Y9G9 81 aa5.46□□□□□ -1.54
CMTM1-216ENST00000533078 RBM3P98179 157 aaKnown RBP5.43□□□□□ -1.54
CMTM1-216ENST00000533078 PDE6GP18545 87 aa5.42□□□□□ -1.54
CMTM1-216ENST00000533078 H1FX-AS1Q4G0G2 97 aa5.42□□□□□ -1.54
CMTM1-216ENST00000533078 IGKV3D-7A0A0C4DH55 119 aa5.4□□□□□ -1.54
CMTM1-216ENST00000533078 PCP4P48539 62 aa5.4□□□□□ -1.54
CMTM1-216ENST00000533078 C8orf17Q9NRJ1 99 aa5.4□□□□□ -1.54
CMTM1-216ENST00000533078 LOC110117498A0A087WWA1 95 aa5.39□□□□□ -1.55
CMTM1-216ENST00000533078 LINC00643Q86TS7 51 aa5.39□□□□□ -1.55
CMTM1-216ENST00000533078 IMUPQ9GZP8 106 aa5.39□□□□□ -1.55
CMTM1-216ENST00000533078 A6NN06 94 aa5.38□□□□□ -1.55
CMTM1-216ENST00000533078 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
CMTM1-216ENST00000533078 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
CMTM1-216ENST00000533078 MT-ATP8P03928 68 aa5.37□□□□□ -1.55
CMTM1-216ENST00000533078 Q6ZQT0 140 aa5.37□□□□□ -1.55
CMTM1-216ENST00000533078 Q6ZVQ6 151 aa5.37□□□□□ -1.55
CMTM1-216ENST00000533078 C14orf132Q9NPU4 83 aa5.36□□□□□ -1.55
CMTM1-216ENST00000533078 FAM236AA0A1B0GUQ0 79 aa5.34□□□□□ -1.55
CMTM1-216ENST00000533078 FAM236BA0A1B0GV22 79 aa5.34□□□□□ -1.55
CMTM1-216ENST00000533078 A0A1B0GW54 56 aa5.34□□□□□ -1.55
CMTM1-216ENST00000533078 ATP5EP2Q5VTU8 51 aa5.33□□□□□ -1.56
CMTM1-216ENST00000533078 NDUFS5O43920 106 aa5.32□□□□□ -1.56
CMTM1-216ENST00000533078 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
CMTM1-216ENST00000533078 Q5VV11 94 aa5.3□□□□□ -1.56
CMTM1-216ENST00000533078 TMEM254Q8TBM7 123 aa5.3□□□□□ -1.56
CMTM1-216ENST00000533078 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
CMTM1-216ENST00000533078 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
CMTM1-216ENST00000533078 C7orf65Q6ZTY9 151 aa5.29□□□□□ -1.56
CMTM1-216ENST00000533078 PRR15Q8IV56 129 aa5.29□□□□□ -1.56
CMTM1-216ENST00000533078 UBL5Q9BZL1 73 aa5.29□□□□□ -1.56
CMTM1-216ENST00000533078 KMT2DO14686 5537 aa5.28□□□□□ -1.56
CMTM1-216ENST00000533078 hDV103S1A0JD37 113 aa5.26□□□□□ -1.57
CMTM1-216ENST00000533078 NREPQ16612 68 aa5.26□□□□□ -1.57
CMTM1-216ENST00000533078 CXCL6P80162 114 aa5.25□□□□□ -1.57
CMTM1-216ENST00000533078 MMP24-AS1A0A0U1RRL7 71 aa5.24□□□□□ -1.57
CMTM1-216ENST00000533078 HIST1H4AP62805 103 aaKnown RBP5.23□□□□□ -1.57
CMTM1-216ENST00000533078 C5orf47Q569G3 176 aa5.23□□□□□ -1.57
CMTM1-216ENST00000533078 ANAPC13Q9BS18 74 aa5.22□□□□□ -1.57
CMTM1-216ENST00000533078 MT1BP07438 61 aa5.21□□□□□ -1.58
CMTM1-216ENST00000533078 KRTAP5-9P26371 169 aa5.2□□□□□ -1.58
CMTM1-216ENST00000533078 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
CMTM1-216ENST00000533078 C4orf26Q17RF5 130 aa5.2□□□□□ -1.58
CMTM1-216ENST00000533078 ATOX1O00244 68 aa5.19□□□□□ -1.58
CMTM1-216ENST00000533078 CSAG1Q6PB30 78 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms