RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 J3KT08 172 aa9.11□□□□□ -0.95
PKP3-209ENST00000533069 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
PKP3-209ENST00000533069 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
PKP3-209ENST00000533069 Q6ZVQ6 151 aa9.09□□□□□ -0.95
PKP3-209ENST00000533069 ATP5EP2Q5VTU8 51 aa9.08□□□□□ -0.96
PKP3-209ENST00000533069 LINC00472Q9H8W2 130 aa9.07□□□□□ -0.96
PKP3-209ENST00000533069 KRTAP4-1Q9BYQ7 146 aa9.06□□□□□ -0.96
PKP3-209ENST00000533069 LINC00643Q86TS7 51 aa9.05□□□□□ -0.96
PKP3-209ENST00000533069 SIGMAR1Q99720 223 aa9.05□□□□□ -0.96
PKP3-209ENST00000533069 BPY2O14599 106 aa9.04□□□□□ -0.96
PKP3-209ENST00000533069 CXCL6P80162 114 aa9.03□□□□□ -0.96
PKP3-209ENST00000533069 Q96NJ1 140 aa9.02□□□□□ -0.97
PKP3-209ENST00000533069 PCOTHQ58A44 107 aa9.01□□□□□ -0.97
PKP3-209ENST00000533069 NDUFB1O75438 58 aa9□□□□□ -0.97
PKP3-209ENST00000533069 IGKV4-1P06312 121 aa9□□□□□ -0.97
PKP3-209ENST00000533069 A8MWP4 228 aa8.97□□□□□ -0.97
PKP3-209ENST00000533069 RPL37P61927 97 aaKnown RBP8.96□□□□□ -0.98
PKP3-209ENST00000533069 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
PKP3-209ENST00000533069 DSCR10P59022 87 aa8.92□□□□□ -0.98
PKP3-209ENST00000533069 A0A1B0GVX0 72 aa8.91□□□□□ -0.98
PKP3-209ENST00000533069 C8orf87E5RJ46 101 aa8.91□□□□□ -0.98
PKP3-209ENST00000533069 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
PKP3-209ENST00000533069 IMUPQ9GZP8 106 aa8.91□□□□□ -0.98
PKP3-209ENST00000533069 IGKV3D-7A0A0C4DH55 119 aa8.88□□□□□ -0.99
PKP3-209ENST00000533069 K7EQZ3 153 aa8.87□□□□□ -0.99
PKP3-209ENST00000533069 IGHV6-1A0A0B4J1U7 121 aa8.85□□□□□ -0.99
PKP3-209ENST00000533069 LINC00313P59037 77 aa8.84□□□□□ -0.99
PKP3-209ENST00000533069 LCE2CQ5TA81 110 aa8.84□□□□□ -0.99
PKP3-209ENST00000533069 HIST1H4AP62805 103 aaKnown RBP8.83□□□□□ -1
PKP3-209ENST00000533069 KRTAP19-2Q3LHN2 52 aa8.83□□□□□ -1
PKP3-209ENST00000533069 Q75L30 129 aa8.83□□□□□ -1
PKP3-209ENST00000533069 KRTAP9-2Q9BYQ4 174 aa8.83□□□□□ -1
PKP3-209ENST00000533069 C8orf17Q9NRJ1 99 aa8.82□□□□□ -1
PKP3-209ENST00000533069 MT-ATP8P03928 68 aa8.81□□□□□ -1
PKP3-209ENST00000533069 ATP11AUNQ6ZP68 121 aa8.8□□□□□ -1
PKP3-209ENST00000533069 Q8N9L7 120 aa8.8□□□□□ -1
PKP3-209ENST00000533069 HCG22E2RYF7 251 aa8.79□□□□□ -1
PKP3-209ENST00000533069 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
PKP3-209ENST00000533069 hDV103S1A0JD37 113 aa8.76□□□□□ -1.01
PKP3-209ENST00000533069 CASC2Q6XLA1 102 aa8.76□□□□□ -1.01
PKP3-209ENST00000533069 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
PKP3-209ENST00000533069 MT1HP80294 61 aa8.75□□□□□ -1.01
PKP3-209ENST00000533069 C20orf166-AS1Q96NR2 134 aa8.75□□□□□ -1.01
PKP3-209ENST00000533069 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
PKP3-209ENST00000533069 A8MUU9 505 aa8.72□□□□□ -1.01
PKP3-209ENST00000533069 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
PKP3-209ENST00000533069 A0A087WVE0 104 aa8.7□□□□□ -1.02
PKP3-209ENST00000533069 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
PKP3-209ENST00000533069 KRTAP16-1A8MUX0 517 aa8.69□□□□□ -1.02
PKP3-209ENST00000533069 WFDC13Q8IUB5 93 aa8.69□□□□□ -1.02
PKP3-209ENST00000533069 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
PKP3-209ENST00000533069 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
PKP3-209ENST00000533069 SCGB1A1P11684 91 aa8.65□□□□□ -1.02
PKP3-209ENST00000533069 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
PKP3-209ENST00000533069 FAM236AA0A1B0GUQ0 79 aa8.63□□□□□ -1.03
PKP3-209ENST00000533069 FAM236BA0A1B0GV22 79 aa8.63□□□□□ -1.03
PKP3-209ENST00000533069 LCE2DQ5TA82 110 aaPredicted RBP8.62□□□□□ -1.03
PKP3-209ENST00000533069 M0R2T5 61 aa8.61□□□□□ -1.03
PKP3-209ENST00000533069 NDUFS5O43920 106 aa8.61□□□□□ -1.03
PKP3-209ENST00000533069 ATOX1O00244 68 aa8.6□□□□□ -1.03
PKP3-209ENST00000533069 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
PKP3-209ENST00000533069 KRTAP10-6P60371 365 aaPredicted RBP8.57□□□□□ -1.04
PKP3-209ENST00000533069 FLGP20930 4061 aaPredicted RBP8.56□□□□□ -1.04
PKP3-209ENST00000533069 UQCRQO14949 82 aa8.56□□□□□ -1.04
PKP3-209ENST00000533069 KRTAP9-6A0A140TA67 174 aa8.53□□□□□ -1.04
PKP3-209ENST00000533069 OCR1Q9BZK8 76 aa8.53□□□□□ -1.04
PKP3-209ENST00000533069 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.05
PKP3-209ENST00000533069 TRAV7A0A075B6U4 112 aa8.5□□□□□ -1.05
PKP3-209ENST00000533069 TRAV22A0A0B4J277 110 aa8.49□□□□□ -1.05
PKP3-209ENST00000533069 C5orf47Q569G3 176 aa8.49□□□□□ -1.05
PKP3-209ENST00000533069 H3BPC8 53 aa8.46□□□□□ -1.06
PKP3-209ENST00000533069 MP68P56378 58 aa8.46□□□□□ -1.06
PKP3-209ENST00000533069 SERP2Q8N6R1 65 aa8.46□□□□□ -1.06
PKP3-209ENST00000533069 RBM12B-AS1Q9P1G2 102 aa8.42□□□□□ -1.06
PKP3-209ENST00000533069 H0Y9P7 68 aa8.41□□□□□ -1.06
PKP3-209ENST00000533069 Q5W150 140 aa8.41□□□□□ -1.06
PKP3-209ENST00000533069 FAM236DA0A1B0GTK5 79 aa8.4□□□□□ -1.06
PKP3-209ENST00000533069 LOC101927531A0A1B0GV80 90 aa8.4□□□□□ -1.06
PKP3-209ENST00000533069 FAM236CP0DP71 79 aa8.4□□□□□ -1.06
PKP3-209ENST00000533069 HRES1P13985 223 aa8.4□□□□□ -1.06
PKP3-209ENST00000533069 MPLKIPQ8TAP9 179 aa8.4□□□□□ -1.06
PKP3-209ENST00000533069 ANAPC13Q9BS18 74 aa8.4□□□□□ -1.06
PKP3-209ENST00000533069 COX7CP15954 63 aa8.37□□□□□ -1.07
PKP3-209ENST00000533069 FSIP2Q5CZC0 6907 aa8.37□□□□□ -1.07
PKP3-209ENST00000533069 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
PKP3-209ENST00000533069 CRCT1Q9UGL9 99 aa8.36□□□□□ -1.07
PKP3-209ENST00000533069 IGKV2-30P06310 120 aa8.34□□□□□ -1.07
PKP3-209ENST00000533069 C1orf64Q8NEQ6 169 aa8.33□□□□□ -1.08
PKP3-209ENST00000533069 LINC00208Q96KT6 92 aa8.33□□□□□ -1.08
PKP3-209ENST00000533069 SPINK7P58062 85 aa8.32□□□□□ -1.08
PKP3-209ENST00000533069 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
PKP3-209ENST00000533069 KRTAP9-8Q9BYQ0 159 aa8.28□□□□□ -1.08
PKP3-209ENST00000533069 CYP4F30PQ9H0H9 118 aa8.28□□□□□ -1.08
PKP3-209ENST00000533069 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
PKP3-209ENST00000533069 C20orf197Q8N268 126 aa8.26□□□□□ -1.09
PKP3-209ENST00000533069 NDUFC1O43677 76 aa8.23□□□□□ -1.09
PKP3-209ENST00000533069 SNURFQ9Y675 71 aa8.18□□□□□ -1.1
PKP3-209ENST00000533069 MT2AP02795 61 aa8.17□□□□□ -1.1
PKP3-209ENST00000533069 CCDC179H3BU77 68 aa8.13□□□□□ -1.11
PKP3-209ENST00000533069 SPANXA2-OT1Q8N9U9 137 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms