RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 A0A1B0GW54 56 aa7.1□□□□□ -1.27
TRAPPC4-212ENST00000533058 Q96NJ1 140 aa7.09□□□□□ -1.27
TRAPPC4-212ENST00000533058 ETDBQ3ZM63 59 aa7.08□□□□□ -1.28
TRAPPC4-212ENST00000533058 NREPQ16612 68 aa7.07□□□□□ -1.28
TRAPPC4-212ENST00000533058 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC4-212ENST00000533058 LINC00472Q9H8W2 130 aa7.07□□□□□ -1.28
TRAPPC4-212ENST00000533058 J3KT08 172 aa7.04□□□□□ -1.28
TRAPPC4-212ENST00000533058 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
TRAPPC4-212ENST00000533058 IGHV6-1A0A0B4J1U7 121 aa7.02□□□□□ -1.29
TRAPPC4-212ENST00000533058 NDUFB1O75438 58 aa7.01□□□□□ -1.29
TRAPPC4-212ENST00000533058 DSCR10P59022 87 aa7.01□□□□□ -1.29
TRAPPC4-212ENST00000533058 LINC00313P59037 77 aa6.99□□□□□ -1.29
TRAPPC4-212ENST00000533058 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
TRAPPC4-212ENST00000533058 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
TRAPPC4-212ENST00000533058 UBL5Q9BZL1 73 aa6.98□□□□□ -1.29
TRAPPC4-212ENST00000533058 BPY2O14599 106 aa6.97□□□□□ -1.29
TRAPPC4-212ENST00000533058 Q6ZVQ6 151 aa6.97□□□□□ -1.29
TRAPPC4-212ENST00000533058 A8MWP4 228 aa6.96□□□□□ -1.3
TRAPPC4-212ENST00000533058 LINC00846Q9NV44 126 aa6.96□□□□□ -1.3
TRAPPC4-212ENST00000533058 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
TRAPPC4-212ENST00000533058 PCOTHQ58A44 107 aa6.95□□□□□ -1.3
TRAPPC4-212ENST00000533058 IGKV3D-7A0A0C4DH55 119 aa6.93□□□□□ -1.3
TRAPPC4-212ENST00000533058 RPL37P61927 97 aaKnown RBP6.93□□□□□ -1.3
TRAPPC4-212ENST00000533058 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
TRAPPC4-212ENST00000533058 PRR15Q8IV56 129 aa6.91□□□□□ -1.3
TRAPPC4-212ENST00000533058 ACYP1P07311 99 aa6.9□□□□□ -1.3
TRAPPC4-212ENST00000533058 ATP11AUNQ6ZP68 121 aa6.9□□□□□ -1.3
TRAPPC4-212ENST00000533058 Q75L30 129 aa6.9□□□□□ -1.3
TRAPPC4-212ENST00000533058 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.3
TRAPPC4-212ENST00000533058 K7EQZ3 153 aa6.89□□□□□ -1.31
TRAPPC4-212ENST00000533058 C20orf166-AS1Q96NR2 134 aa6.88□□□□□ -1.31
TRAPPC4-212ENST00000533058 A8MUU9 505 aa6.87□□□□□ -1.31
TRAPPC4-212ENST00000533058 KRTAP16-1A8MUX0 517 aa6.87□□□□□ -1.31
TRAPPC4-212ENST00000533058 KRTAP19-2Q3LHN2 52 aa6.87□□□□□ -1.31
TRAPPC4-212ENST00000533058 Q8N9L7 120 aa6.87□□□□□ -1.31
TRAPPC4-212ENST00000533058 FAM240AA0A1B0GVK7 77 aa6.86□□□□□ -1.31
TRAPPC4-212ENST00000533058 J3QR89 54 aa6.84□□□□□ -1.31
TRAPPC4-212ENST00000533058 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
TRAPPC4-212ENST00000533058 hDV103S1A0JD37 113 aa6.82□□□□□ -1.32
TRAPPC4-212ENST00000533058 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
TRAPPC4-212ENST00000533058 CXCL6P80162 114 aa6.81□□□□□ -1.32
TRAPPC4-212ENST00000533058 WFDC13Q8IUB5 93 aa6.81□□□□□ -1.32
TRAPPC4-212ENST00000533058 TMEM254Q8TBM7 123 aa6.81□□□□□ -1.32
TRAPPC4-212ENST00000533058 NDUFS5O43920 106 aa6.8□□□□□ -1.32
TRAPPC4-212ENST00000533058 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
TRAPPC4-212ENST00000533058 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC4-212ENST00000533058 CASC2Q6XLA1 102 aa6.79□□□□□ -1.32
TRAPPC4-212ENST00000533058 MT1HP80294 61 aa6.77□□□□□ -1.33
TRAPPC4-212ENST00000533058 ATP5EP2Q5VTU8 51 aa6.77□□□□□ -1.33
TRAPPC4-212ENST00000533058 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC4-212ENST00000533058 HCG22E2RYF7 251 aa6.76□□□□□ -1.33
TRAPPC4-212ENST00000533058 LINC00643Q86TS7 51 aa6.75□□□□□ -1.33
TRAPPC4-212ENST00000533058 ZCCHC13Q8WW36 166 aaKnown RBP6.75□□□□□ -1.33
TRAPPC4-212ENST00000533058 HIST1H4AP62805 103 aaKnown RBP6.74□□□□□ -1.33
TRAPPC4-212ENST00000533058 K7ERU9 68 aa6.71□□□□□ -1.34
TRAPPC4-212ENST00000533058 COX6B2Q6YFQ2 88 aa6.7□□□□□ -1.34
TRAPPC4-212ENST00000533058 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC4-212ENST00000533058 PCP4P48539 62 aa6.64□□□□□ -1.35
TRAPPC4-212ENST00000533058 A0A087WVE0 104 aa6.63□□□□□ -1.35
TRAPPC4-212ENST00000533058 SPINK7P58062 85 aa6.63□□□□□ -1.35
TRAPPC4-212ENST00000533058 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC4-212ENST00000533058 M0R2T5 61 aa6.62□□□□□ -1.35
TRAPPC4-212ENST00000533058 Q5W150 140 aa6.61□□□□□ -1.35
TRAPPC4-212ENST00000533058 TP53AIP1Q9HCN2 124 aa6.61□□□□□ -1.35
TRAPPC4-212ENST00000533058 IGKV2D-30A0A075B6S6 120 aa6.6□□□□□ -1.35
TRAPPC4-212ENST00000533058 IGKV2-30P06310 120 aa6.6□□□□□ -1.35
TRAPPC4-212ENST00000533058 FAM236DA0A1B0GTK5 79 aa6.59□□□□□ -1.35
TRAPPC4-212ENST00000533058 FAM236CP0DP71 79 aa6.59□□□□□ -1.35
TRAPPC4-212ENST00000533058 RBM12B-AS1Q9P1G2 102 aa6.58□□□□□ -1.36
TRAPPC4-212ENST00000533058 KRTAP9-6A0A140TA67 174 aa6.57□□□□□ -1.36
TRAPPC4-212ENST00000533058 HRES1P13985 223 aa6.56□□□□□ -1.36
TRAPPC4-212ENST00000533058 C7orf65Q6ZTY9 151 aa6.56□□□□□ -1.36
TRAPPC4-212ENST00000533058 MT-ATP8P03928 68 aa6.55□□□□□ -1.36
TRAPPC4-212ENST00000533058 MPLKIPQ8TAP9 179 aa6.54□□□□□ -1.36
TRAPPC4-212ENST00000533058 SCGB1A1P11684 91 aa6.53□□□□□ -1.36
TRAPPC4-212ENST00000533058 UQCRQO14949 82 aa6.52□□□□□ -1.37
TRAPPC4-212ENST00000533058 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
TRAPPC4-212ENST00000533058 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
TRAPPC4-212ENST00000533058 H0Y9P7 68 aa6.47□□□□□ -1.37
TRAPPC4-212ENST00000533058 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.38
TRAPPC4-212ENST00000533058 ATOX1O00244 68 aa6.45□□□□□ -1.38
TRAPPC4-212ENST00000533058 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
TRAPPC4-212ENST00000533058 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
TRAPPC4-212ENST00000533058 LOC101927531A0A1B0GV80 90 aa6.44□□□□□ -1.38
TRAPPC4-212ENST00000533058 OCR1Q9BZK8 76 aa6.44□□□□□ -1.38
TRAPPC4-212ENST00000533058 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
TRAPPC4-212ENST00000533058 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
TRAPPC4-212ENST00000533058 MP68P56378 58 aa6.42□□□□□ -1.38
TRAPPC4-212ENST00000533058 C4orf26Q17RF5 130 aa6.42□□□□□ -1.38
TRAPPC4-212ENST00000533058 CYP4F30PQ9H0H9 118 aa6.41□□□□□ -1.38
TRAPPC4-212ENST00000533058 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.38
TRAPPC4-212ENST00000533058 LINC00208Q96KT6 92 aa6.4□□□□□ -1.38
TRAPPC4-212ENST00000533058 C5orf47Q569G3 176 aa6.39□□□□□ -1.39
TRAPPC4-212ENST00000533058 SMIM20Q8N5G0 67 aa6.37□□□□□ -1.39
TRAPPC4-212ENST00000533058 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
TRAPPC4-212ENST00000533058 TRAV7A0A075B6U4 112 aa6.34□□□□□ -1.39
TRAPPC4-212ENST00000533058 H3BPC8 53 aa6.33□□□□□ -1.4
TRAPPC4-212ENST00000533058 MT2AP02795 61 aa6.32□□□□□ -1.4
TRAPPC4-212ENST00000533058 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
TRAPPC4-212ENST00000533058 MT1FP04733 61 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms