RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 LINC00846Q9NV44 126 aa8.31□□□□□ -1.08
CPSF1-210ENST00000532935 LCE2AQ5TA79 106 aaPredicted RBP8.3□□□□□ -1.08
CPSF1-210ENST00000532935 SS18L2Q9UHA2 77 aa8.29□□□□□ -1.08
CPSF1-210ENST00000532935 ATP5EP2Q5VTU8 51 aa8.28□□□□□ -1.08
CPSF1-210ENST00000532935 IMUPQ9GZP8 106 aa8.28□□□□□ -1.08
CPSF1-210ENST00000532935 A0A087WSZ3 146 aa8.26□□□□□ -1.09
CPSF1-210ENST00000532935 RPL37P61927 97 aaKnown RBP8.26□□□□□ -1.09
CPSF1-210ENST00000532935 A0A1W2PNM2 257 aa8.25□□□□□ -1.09
CPSF1-210ENST00000532935 MT-ATP8P03928 68 aa8.24□□□□□ -1.09
CPSF1-210ENST00000532935 SCGB1A1P11684 91 aa8.24□□□□□ -1.09
CPSF1-210ENST00000532935 Q6ZVQ6 151 aa8.22□□□□□ -1.09
CPSF1-210ENST00000532935 CXCL6P80162 114 aa8.2□□□□□ -1.1
CPSF1-210ENST00000532935 NREPQ16612 68 aa8.2□□□□□ -1.1
CPSF1-210ENST00000532935 Q96NJ1 140 aa8.2□□□□□ -1.1
CPSF1-210ENST00000532935 Q75L30 129 aa8.15□□□□□ -1.1
CPSF1-210ENST00000532935 KRTAP19-2Q3LHN2 52 aa8.13□□□□□ -1.11
CPSF1-210ENST00000532935 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
CPSF1-210ENST00000532935 IGKV3D-7A0A0C4DH55 119 aa8.12□□□□□ -1.11
CPSF1-210ENST00000532935 BPY2O14599 106 aa8.11□□□□□ -1.11
CPSF1-210ENST00000532935 IGKV4-1P06312 121 aa8.11□□□□□ -1.11
CPSF1-210ENST00000532935 ATP11AUNQ6ZP68 121 aa8.11□□□□□ -1.11
CPSF1-210ENST00000532935 DSCR10P59022 87 aa8.09□□□□□ -1.11
CPSF1-210ENST00000532935 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
CPSF1-210ENST00000532935 LINC00472Q9H8W2 130 aa8.09□□□□□ -1.11
CPSF1-210ENST00000532935 DEFB116Q30KQ4 102 aa8.08□□□□□ -1.12
CPSF1-210ENST00000532935 A8MUU9 505 aa8.07□□□□□ -1.12
CPSF1-210ENST00000532935 J3KT08 172 aa8.07□□□□□ -1.12
CPSF1-210ENST00000532935 LINC00313P59037 77 aa8.05□□□□□ -1.12
CPSF1-210ENST00000532935 HIST1H4AP62805 103 aaKnown RBP8.05□□□□□ -1.12
CPSF1-210ENST00000532935 MT1HP80294 61 aa8.02□□□□□ -1.13
CPSF1-210ENST00000532935 KRTAP16-1A8MUX0 517 aa8.01□□□□□ -1.13
CPSF1-210ENST00000532935 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
CPSF1-210ENST00000532935 KRTAP9-2Q9BYQ4 174 aa8.01□□□□□ -1.13
CPSF1-210ENST00000532935 FLGP20930 4061 aaPredicted RBP8□□□□□ -1.13
CPSF1-210ENST00000532935 IGHV6-1A0A0B4J1U7 121 aa8□□□□□ -1.13
CPSF1-210ENST00000532935 FAM236AA0A1B0GUQ0 79 aa8□□□□□ -1.13
CPSF1-210ENST00000532935 FAM236BA0A1B0GV22 79 aa8□□□□□ -1.13
CPSF1-210ENST00000532935 ATOX1O00244 68 aa7.99□□□□□ -1.13
CPSF1-210ENST00000532935 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
CPSF1-210ENST00000532935 A0A087WVE0 104 aa7.97□□□□□ -1.13
CPSF1-210ENST00000532935 A0A1B0GVX0 72 aa7.97□□□□□ -1.13
CPSF1-210ENST00000532935 A8MWP4 228 aa7.97□□□□□ -1.13
CPSF1-210ENST00000532935 NDUFB1O75438 58 aa7.97□□□□□ -1.13
CPSF1-210ENST00000532935 PCP4P48539 62 aa7.97□□□□□ -1.13
CPSF1-210ENST00000532935 C8orf87E5RJ46 101 aa7.95□□□□□ -1.14
CPSF1-210ENST00000532935 PRR15Q8IV56 129 aa7.95□□□□□ -1.14
CPSF1-210ENST00000532935 SMIM20Q8N5G0 67 aa7.95□□□□□ -1.14
CPSF1-210ENST00000532935 ANAPC13Q9BS18 74 aa7.94□□□□□ -1.14
CPSF1-210ENST00000532935 K7EQZ3 153 aa7.93□□□□□ -1.14
CPSF1-210ENST00000532935 Q8N9L7 120 aa7.92□□□□□ -1.14
CPSF1-210ENST00000532935 HCG22E2RYF7 251 aa7.89□□□□□ -1.15
CPSF1-210ENST00000532935 M0R2T5 61 aa7.89□□□□□ -1.15
CPSF1-210ENST00000532935 SERP2Q8N6R1 65 aa7.87□□□□□ -1.15
CPSF1-210ENST00000532935 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
CPSF1-210ENST00000532935 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
CPSF1-210ENST00000532935 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
CPSF1-210ENST00000532935 UQCRQO14949 82 aa7.83□□□□□ -1.16
CPSF1-210ENST00000532935 COX7CP15954 63 aa7.83□□□□□ -1.16
CPSF1-210ENST00000532935 LCE2DQ5TA82 110 aaPredicted RBP7.83□□□□□ -1.16
CPSF1-210ENST00000532935 C8orf17Q9NRJ1 99 aa7.83□□□□□ -1.16
CPSF1-210ENST00000532935 CASC2Q6XLA1 102 aa7.82□□□□□ -1.16
CPSF1-210ENST00000532935 MMP24-AS1A0A0U1RRL7 71 aa7.81□□□□□ -1.16
CPSF1-210ENST00000532935 Q8N9P0 234 aaPredicted RBP7.81□□□□□ -1.16
CPSF1-210ENST00000532935 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
CPSF1-210ENST00000532935 OCR1Q9BZK8 76 aa7.8□□□□□ -1.16
CPSF1-210ENST00000532935 hDV103S1A0JD37 113 aa7.79□□□□□ -1.16
CPSF1-210ENST00000532935 HRES1P13985 223 aa7.78□□□□□ -1.16
CPSF1-210ENST00000532935 WFDC13Q8IUB5 93 aa7.78□□□□□ -1.16
CPSF1-210ENST00000532935 TMEM254Q8TBM7 123 aa7.78□□□□□ -1.16
CPSF1-210ENST00000532935 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
CPSF1-210ENST00000532935 FAM236DA0A1B0GTK5 79 aa7.75□□□□□ -1.17
CPSF1-210ENST00000532935 FAM236CP0DP71 79 aa7.75□□□□□ -1.17
CPSF1-210ENST00000532935 TP53AIP1Q9HCN2 124 aa7.75□□□□□ -1.17
CPSF1-210ENST00000532935 RBM12B-AS1Q9P1G2 102 aa7.75□□□□□ -1.17
CPSF1-210ENST00000532935 MRPL34Q9BQ48 92 aaKnown RBP7.74□□□□□ -1.17
CPSF1-210ENST00000532935 C5orf47Q569G3 176 aa7.73□□□□□ -1.17
CPSF1-210ENST00000532935 CCDC179H3BU77 68 aa7.71□□□□□ -1.18
CPSF1-210ENST00000532935 SPINK7P58062 85 aa7.71□□□□□ -1.18
CPSF1-210ENST00000532935 KRTAP9-6A0A140TA67 174 aa7.7□□□□□ -1.18
CPSF1-210ENST00000532935 FSIP2Q5CZC0 6907 aa7.68□□□□□ -1.18
CPSF1-210ENST00000532935 H3BPC8 53 aa7.68□□□□□ -1.18
CPSF1-210ENST00000532935 KLKP1Q107X0 134 aa7.68□□□□□ -1.18
CPSF1-210ENST00000532935 MP68P56378 58 aa7.65□□□□□ -1.18
CPSF1-210ENST00000532935 C20orf197Q8N268 126 aa7.65□□□□□ -1.18
CPSF1-210ENST00000532935 NDUFC1O43677 76 aa7.64□□□□□ -1.19
CPSF1-210ENST00000532935 NDUFS5O43920 106 aa7.63□□□□□ -1.19
CPSF1-210ENST00000532935 TRAV22A0A0B4J277 110 aa7.61□□□□□ -1.19
CPSF1-210ENST00000532935 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
CPSF1-210ENST00000532935 H0Y9P7 68 aa7.59□□□□□ -1.19
CPSF1-210ENST00000532935 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
CPSF1-210ENST00000532935 Q5W150 140 aa7.55□□□□□ -1.2
CPSF1-210ENST00000532935 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
CPSF1-210ENST00000532935 TMEM258P61165 79 aa7.54□□□□□ -1.2
CPSF1-210ENST00000532935 H7BZZ5 65 aa7.53□□□□□ -1.2
CPSF1-210ENST00000532935 LINC00208Q96KT6 92 aa7.53□□□□□ -1.2
CPSF1-210ENST00000532935 C1orf64Q8NEQ6 169 aa7.52□□□□□ -1.21
CPSF1-210ENST00000532935 IGKV2D-30A0A075B6S6 120 aa7.51□□□□□ -1.21
CPSF1-210ENST00000532935 LOC101927531A0A1B0GV80 90 aa7.51□□□□□ -1.21
CPSF1-210ENST00000532935 MT2AP02795 61 aa7.51□□□□□ -1.21
CPSF1-210ENST00000532935 IGKV2-30P06310 120 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms