RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 HIST1H2BLQ99880 126 aa3.6□□□□□ -1.83
NXF1-212ENST00000531872 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
NXF1-212ENST00000531872 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
NXF1-212ENST00000531872 A0A1W2PNM2 257 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST1H2BKO60814 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST1H2BJP06899 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 C3orf79P0CE67 100 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST1H2BOP23527 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST1H2BBP33778 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 NDUFV3P56181 108 aaKnown RBP3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST1H2BDP58876 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST1H2BCP62807 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST2H2BEQ16778 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.59□□□□□ -1.83
NXF1-212ENST00000531872 ZCCHC13Q8WW36 166 aaKnown RBP3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST1H2BHQ93079 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST1H2BNQ99877 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 HIST1H2BMQ99879 126 aa3.59□□□□□ -1.83
NXF1-212ENST00000531872 MT1BP07438 61 aa3.58□□□□□ -1.84
NXF1-212ENST00000531872 WFDC13Q8IUB5 93 aa3.58□□□□□ -1.84
NXF1-212ENST00000531872 FAM218AQ96MZ4 157 aa3.58□□□□□ -1.84
NXF1-212ENST00000531872 IGHV6-1A0A0B4J1U7 121 aa3.57□□□□□ -1.84
NXF1-212ENST00000531872 H3BMG7 143 aa3.57□□□□□ -1.84
NXF1-212ENST00000531872 LINC00472Q9H8W2 130 aa3.57□□□□□ -1.84
NXF1-212ENST00000531872 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
NXF1-212ENST00000531872 DEFB116Q30KQ4 102 aa3.56□□□□□ -1.84
NXF1-212ENST00000531872 TRBV7-4A0A0J9YYF1 115 aa3.55□□□□□ -1.84
NXF1-212ENST00000531872 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
NXF1-212ENST00000531872 KRTDAPP60985 99 aa3.54□□□□□ -1.84
NXF1-212ENST00000531872 RAB37Q96AX2 223 aa3.54□□□□□ -1.84
NXF1-212ENST00000531872 A0A1B0GVX0 72 aa3.53□□□□□ -1.84
NXF1-212ENST00000531872 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
NXF1-212ENST00000531872 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
NXF1-212ENST00000531872 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
NXF1-212ENST00000531872 Q5VV11 94 aa3.53□□□□□ -1.84
NXF1-212ENST00000531872 ATOH7Q8N100 152 aa3.53□□□□□ -1.84
NXF1-212ENST00000531872 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
NXF1-212ENST00000531872 SNCGO76070 127 aa3.52□□□□□ -1.85
NXF1-212ENST00000531872 H0YGX0 51 aa3.51□□□□□ -1.85
NXF1-212ENST00000531872 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
NXF1-212ENST00000531872 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
NXF1-212ENST00000531872 UQCR10Q9UDW1 63 aa3.51□□□□□ -1.85
NXF1-212ENST00000531872 FABP2P12104 132 aa3.5□□□□□ -1.85
NXF1-212ENST00000531872 C5orf47Q569G3 176 aa3.5□□□□□ -1.85
NXF1-212ENST00000531872 ANKRD29Q8N6D5 301 aa3.5□□□□□ -1.85
NXF1-212ENST00000531872 A0A1B0GX51 115 aa3.49□□□□□ -1.85
NXF1-212ENST00000531872 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
NXF1-212ENST00000531872 SPRR2EP22531 72 aa3.48□□□□□ -1.85
NXF1-212ENST00000531872 SPRR2BP35325 72 aa3.48□□□□□ -1.85
NXF1-212ENST00000531872 SPRR2AP35326 72 aa3.48□□□□□ -1.85
NXF1-212ENST00000531872 VAMP8Q9BV40 100 aa3.48□□□□□ -1.85
NXF1-212ENST00000531872 TRACP01848 142 aa3.47□□□□□ -1.85
NXF1-212ENST00000531872 CCKP06307 115 aa3.46□□□□□ -1.86
NXF1-212ENST00000531872 BATFQ16520 125 aa3.46□□□□□ -1.86
NXF1-212ENST00000531872 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
NXF1-212ENST00000531872 IGKV3D-7A0A0C4DH55 119 aa3.45□□□□□ -1.86
NXF1-212ENST00000531872 TAX1BP3O14907 124 aa3.45□□□□□ -1.86
NXF1-212ENST00000531872 HSD52Q0P140 79 aa3.45□□□□□ -1.86
NXF1-212ENST00000531872 GTF2H5Q6ZYL4 71 aa3.45□□□□□ -1.86
NXF1-212ENST00000531872 HIST1H4GQ99525 98 aa3.45□□□□□ -1.86
NXF1-212ENST00000531872 FAM236AA0A1B0GUQ0 79 aa3.44□□□□□ -1.86
NXF1-212ENST00000531872 FAM236BA0A1B0GV22 79 aa3.44□□□□□ -1.86
NXF1-212ENST00000531872 J3KT08 172 aa3.44□□□□□ -1.86
NXF1-212ENST00000531872 J3QR89 54 aa3.44□□□□□ -1.86
NXF1-212ENST00000531872 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
NXF1-212ENST00000531872 LYRM7Q5U5X0 104 aa3.44□□□□□ -1.86
NXF1-212ENST00000531872 DSCR8Q96T75 97 aa3.44□□□□□ -1.86
NXF1-212ENST00000531872 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
NXF1-212ENST00000531872 SPATA45Q537H7 98 aa3.43□□□□□ -1.86
NXF1-212ENST00000531872 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
NXF1-212ENST00000531872 PAM16Q9Y3D7 125 aa3.43□□□□□ -1.86
NXF1-212ENST00000531872 A0A0B4J2C4 111 aa3.42□□□□□ -1.86
NXF1-212ENST00000531872 K7EP34 96 aa3.42□□□□□ -1.86
NXF1-212ENST00000531872 C8orf17Q9NRJ1 99 aa3.42□□□□□ -1.86
NXF1-212ENST00000531872 H3BQ85 93 aa3.41□□□□□ -1.86
NXF1-212ENST00000531872 NDUFB1O75438 58 aa3.41□□□□□ -1.86
NXF1-212ENST00000531872 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
NXF1-212ENST00000531872 SMIM20Q8N5G0 67 aa3.41□□□□□ -1.86
NXF1-212ENST00000531872 ORMDL1Q9P0S3 153 aa3.41□□□□□ -1.86
NXF1-212ENST00000531872 TMEM256-PLSCR3K7ERE1 68 aa3.4□□□□□ -1.87
NXF1-212ENST00000531872 Q6ZVQ6 151 aa3.39□□□□□ -1.87
NXF1-212ENST00000531872 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
NXF1-212ENST00000531872 DNAL4O96015 105 aa3.38□□□□□ -1.87
NXF1-212ENST00000531872 IMUPQ9GZP8 106 aa3.38□□□□□ -1.87
NXF1-212ENST00000531872 COX8AP10176 69 aa3.37□□□□□ -1.87
NXF1-212ENST00000531872 SPRR2DP22532 72 aa3.37□□□□□ -1.87
NXF1-212ENST00000531872 Q6ZQT0 140 aa3.37□□□□□ -1.87
NXF1-212ENST00000531872 C2orf91Q6ZV80 131 aa3.37□□□□□ -1.87
NXF1-212ENST00000531872 ANAPC13Q9BS18 74 aa3.37□□□□□ -1.87
NXF1-212ENST00000531872 PRO1854Q9UHT4 67 aa3.37□□□□□ -1.87
NXF1-212ENST00000531872 KLKP1Q107X0 134 aa3.36□□□□□ -1.87
NXF1-212ENST00000531872 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
NXF1-212ENST00000531872 IGKV2D-30A0A075B6S6 120 aa3.35□□□□□ -1.87
NXF1-212ENST00000531872 F8W1H4 67 aa3.35□□□□□ -1.87
NXF1-212ENST00000531872 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
NXF1-212ENST00000531872 RPS28P62857 69 aaKnown RBP3.35□□□□□ -1.87
NXF1-212ENST00000531872 RBM3P98179 157 aaKnown RBP3.35□□□□□ -1.87
NXF1-212ENST00000531872 MRPL34Q9BQ48 92 aaKnown RBP3.35□□□□□ -1.87
NXF1-212ENST00000531872 A0A1W2PPM0 123 aa3.34□□□□□ -1.87
NXF1-212ENST00000531872 CSAG1Q6PB30 78 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms