RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 LRP1BQ9NZR2 4599 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 DYNC1H1Q14204 4646 aaKnown RBP2.43□□□□□ -2.02
SOX6-214ENST00000531297 IGLV5-48A0A075B6I7 105 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 CCKP06307 115 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 CRYGAP11844 174 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 RBM3P98179 157 aaKnown RBP2.43□□□□□ -2.02
SOX6-214ENST00000531297 Q6JHZ5 121 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 PP632Q6XCG6 107 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 Q6ZQT0 140 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 KRTAP13-1Q8IUC0 172 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 SPRR4Q96PI1 79 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 DSCR8Q96T75 97 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 ANAPC13Q9BS18 74 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 IMUPQ9GZP8 106 aa2.43□□□□□ -2.02
SOX6-214ENST00000531297 SPRR1BP22528 89 aa2.42□□□□□ -2.02
SOX6-214ENST00000531297 NDUFV3P56181 108 aaKnown RBP2.42□□□□□ -2.02
SOX6-214ENST00000531297 LINC00483Q53H64 154 aa2.42□□□□□ -2.02
SOX6-214ENST00000531297 C9orf153Q5TBE3 101 aa2.42□□□□□ -2.02
SOX6-214ENST00000531297 SSBP3-AS1Q7Z2R9 100 aa2.42□□□□□ -2.02
SOX6-214ENST00000531297 LINC00846Q9NV44 126 aa2.42□□□□□ -2.02
SOX6-214ENST00000531297 PKHD1P08F94 4074 aa2.42□□□□□ -2.02
SOX6-214ENST00000531297 A0A1B0GW54 56 aa2.41□□□□□ -2.02
SOX6-214ENST00000531297 ERC2-IT1O76042 136 aa2.41□□□□□ -2.02
SOX6-214ENST00000531297 HIST1H4AP62805 103 aaKnown RBP2.41□□□□□ -2.02
SOX6-214ENST00000531297 SPAG11AQ6PDA7 123 aa2.41□□□□□ -2.02
SOX6-214ENST00000531297 LINC00643Q86TS7 51 aa2.41□□□□□ -2.02
SOX6-214ENST00000531297 ST20-AS1Q8NBB2 130 aa2.41□□□□□ -2.02
SOX6-214ENST00000531297 PKHD1L1Q86WI1 4243 aa2.41□□□□□ -2.02
SOX6-214ENST00000531297 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
SOX6-214ENST00000531297 OXTP01178 125 aa2.4□□□□□ -2.03
SOX6-214ENST00000531297 CD164Q04900 197 aa2.4□□□□□ -2.03
SOX6-214ENST00000531297 SS18L2Q9UHA2 77 aa2.4□□□□□ -2.03
SOX6-214ENST00000531297 IGLV8-61A0A075B6I0 122 aa2.39□□□□□ -2.03
SOX6-214ENST00000531297 LIMD2Q9BT23 127 aa2.39□□□□□ -2.03
SOX6-214ENST00000531297 A0A1W2PNM2 257 aa2.38□□□□□ -2.03
SOX6-214ENST00000531297 SPINK1P00995 79 aa2.38□□□□□ -2.03
SOX6-214ENST00000531297 MOBPQ13875 183 aa2.38□□□□□ -2.03
SOX6-214ENST00000531297 VPS13BQ7Z7G8 4022 aa2.38□□□□□ -2.03
SOX6-214ENST00000531297 ATP5EP2Q5VTU8 51 aa2.37□□□□□ -2.03
SOX6-214ENST00000531297 Q6ZVQ6 151 aa2.37□□□□□ -2.03
SOX6-214ENST00000531297 C3orf22Q8N5N4 141 aa2.37□□□□□ -2.03
SOX6-214ENST00000531297 LINC00304Q8N9R0 145 aa2.37□□□□□ -2.03
SOX6-214ENST00000531297 RYR3Q15413 4870 aa2.36□□□□□ -2.03
SOX6-214ENST00000531297 SRRM2Q9UQ35 2752 aaKnown RBP2.36□□□□□ -2.03
SOX6-214ENST00000531297 IGKV3D-7A0A0C4DH55 119 aa2.36□□□□□ -2.03
SOX6-214ENST00000531297 UQCRQO14949 82 aa2.36□□□□□ -2.03
SOX6-214ENST00000531297 KRTAP10-4P60372 401 aaPredicted RBP2.36□□□□□ -2.03
SOX6-214ENST00000531297 RPS29P62273 56 aaKnown RBP2.36□□□□□ -2.03
SOX6-214ENST00000531297 NREPQ16612 68 aa2.36□□□□□ -2.03
SOX6-214ENST00000531297 IGFL1Q6UW32 110 aa2.36□□□□□ -2.03
SOX6-214ENST00000531297 UBL5Q9BZL1 73 aa2.36□□□□□ -2.03
SOX6-214ENST00000531297 A0A087WVE0 104 aa2.35□□□□□ -2.03
SOX6-214ENST00000531297 FAM236AA0A1B0GUQ0 79 aa2.35□□□□□ -2.03
SOX6-214ENST00000531297 FAM236BA0A1B0GV22 79 aa2.35□□□□□ -2.03
SOX6-214ENST00000531297 ATOX1O00244 68 aa2.35□□□□□ -2.03
SOX6-214ENST00000531297 CXCL6P80162 114 aa2.35□□□□□ -2.03
SOX6-214ENST00000531297 OCR1Q9BZK8 76 aa2.35□□□□□ -2.03
SOX6-214ENST00000531297 HSPG2P98160 4391 aa2.34□□□□□ -2.03
SOX6-214ENST00000531297 J3KT08 172 aa2.34□□□□□ -2.03
SOX6-214ENST00000531297 NDUFB1O75438 58 aa2.34□□□□□ -2.03
SOX6-214ENST00000531297 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.03
SOX6-214ENST00000531297 Q5XG85 94 aa2.34□□□□□ -2.03
SOX6-214ENST00000531297 FAT1Q14517 4588 aa2.33□□□□□ -2.04
SOX6-214ENST00000531297 A0A087WSZ3 146 aa2.33□□□□□ -2.04
SOX6-214ENST00000531297 A0A0G2JQZ4 141 aa2.33□□□□□ -2.04
SOX6-214ENST00000531297 CCDC179H3BU77 68 aa2.33□□□□□ -2.04
SOX6-214ENST00000531297 IGKV4-1P06312 121 aa2.33□□□□□ -2.04
SOX6-214ENST00000531297 RPS28P62857 69 aaKnown RBP2.33□□□□□ -2.04
SOX6-214ENST00000531297 ASB16-AS1Q495Z4 193 aa2.33□□□□□ -2.04
SOX6-214ENST00000531297 HRCT1Q6UXD1 115 aa2.33□□□□□ -2.04
SOX6-214ENST00000531297 SMIM20Q8N5G0 67 aa2.33□□□□□ -2.04
SOX6-214ENST00000531297 COX7CP15954 63 aa2.32□□□□□ -2.04
SOX6-214ENST00000531297 FLG2Q5D862 2391 aaPredicted RBP2.32□□□□□ -2.04
SOX6-214ENST00000531297 BPY2O14599 106 aa2.31□□□□□ -2.04
SOX6-214ENST00000531297 TMEM258P61165 79 aa2.31□□□□□ -2.04
SOX6-214ENST00000531297 FP248Q71RG6 208 aaPredicted RBP2.31□□□□□ -2.04
SOX6-214ENST00000531297 Q96NJ1 140 aa2.31□□□□□ -2.04
SOX6-214ENST00000531297 CYSTM1Q9H1C7 97 aa2.31□□□□□ -2.04
SOX6-214ENST00000531297 DMBT1Q9UGM3 2413 aaPredicted RBP2.3□□□□□ -2.04
SOX6-214ENST00000531297 RYR1P21817 5038 aa2.3□□□□□ -2.04
SOX6-214ENST00000531297 SERP2Q8N6R1 65 aa2.3□□□□□ -2.04
SOX6-214ENST00000531297 Q8N9L7 120 aa2.3□□□□□ -2.04
SOX6-214ENST00000531297 LINC00472Q9H8W2 130 aa2.3□□□□□ -2.04
SOX6-214ENST00000531297 C8orf87E5RJ46 101 aa2.29□□□□□ -2.04
SOX6-214ENST00000531297 TNXBP22105 4242 aa2.29□□□□□ -2.04
SOX6-214ENST00000531297 BIRC6Q9NR09 4857 aa2.29□□□□□ -2.04
SOX6-214ENST00000531297 FAT3Q8TDW7 4589 aa2.29□□□□□ -2.04
SOX6-214ENST00000531297 A8MWP4 228 aa2.28□□□□□ -2.04
SOX6-214ENST00000531297 K7EQZ3 153 aa2.28□□□□□ -2.04
SOX6-214ENST00000531297 NDUFC1O43677 76 aa2.28□□□□□ -2.04
SOX6-214ENST00000531297 PRR4Q16378 134 aa2.28□□□□□ -2.04
SOX6-214ENST00000531297 C1orf195Q5TG92 126 aa2.28□□□□□ -2.04
SOX6-214ENST00000531297 EPPK1P58107 5090 aaKnown RBP2.28□□□□□ -2.05
SOX6-214ENST00000531297 KIAA1109Q2LD37 5005 aa2.27□□□□□ -2.05
SOX6-214ENST00000531297 TRAV7A0A075B6U4 112 aa2.27□□□□□ -2.05
SOX6-214ENST00000531297 MT1HL1P0DM35 61 aa2.27□□□□□ -2.05
SOX6-214ENST00000531297 ATP5EP56381 51 aaPredicted RBP2.27□□□□□ -2.05
SOX6-214ENST00000531297 LINC00313P59037 77 aa2.27□□□□□ -2.05
SOX6-214ENST00000531297 C5orf47Q569G3 176 aa2.27□□□□□ -2.05
SOX6-214ENST00000531297 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms