RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 BAALC-AS2P0C853 105 aa5.76□□□□□ -1.49
SF3B2-208ENST00000529994 LINC00313P59037 77 aa5.76□□□□□ -1.49
SF3B2-208ENST00000529994 RBM3P98179 157 aaKnown RBP5.76□□□□□ -1.49
SF3B2-208ENST00000529994 DSCR8Q96T75 97 aa5.76□□□□□ -1.49
SF3B2-208ENST00000529994 IGHV6-1A0A0B4J1U7 121 aa5.75□□□□□ -1.49
SF3B2-208ENST00000529994 MT1FP04733 61 aa5.75□□□□□ -1.49
SF3B2-208ENST00000529994 SMIM6P0DI80 62 aa5.74□□□□□ -1.49
SF3B2-208ENST00000529994 ATXN8Q156A1 80 aa5.74□□□□□ -1.49
SF3B2-208ENST00000529994 BATFQ16520 125 aa5.74□□□□□ -1.49
SF3B2-208ENST00000529994 NOTCH2NLQ7Z3S9 236 aa5.74□□□□□ -1.49
SF3B2-208ENST00000529994 LINC00472Q9H8W2 130 aa5.73□□□□□ -1.49
SF3B2-208ENST00000529994 C9JAW5 83 aa5.72□□□□□ -1.49
SF3B2-208ENST00000529994 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
SF3B2-208ENST00000529994 TRBV20-1A0A075B6N2 111 aa5.71□□□□□ -1.5
SF3B2-208ENST00000529994 KRTAP16-1A8MUX0 517 aa5.71□□□□□ -1.5
SF3B2-208ENST00000529994 KRTAP10-10P60014 251 aa5.71□□□□□ -1.5
SF3B2-208ENST00000529994 TSTD3H0UI37 97 aa5.69□□□□□ -1.5
SF3B2-208ENST00000529994 A0A1B0GVX0 72 aa5.68□□□□□ -1.5
SF3B2-208ENST00000529994 FAM236DA0A1B0GTK5 79 aa5.67□□□□□ -1.5
SF3B2-208ENST00000529994 FAM236CP0DP71 79 aa5.67□□□□□ -1.5
SF3B2-208ENST00000529994 SMCPP49901 116 aaPredicted RBP5.67□□□□□ -1.5
SF3B2-208ENST00000529994 LYRM7Q5U5X0 104 aa5.67□□□□□ -1.5
SF3B2-208ENST00000529994 C14orf132Q9NPU4 83 aa5.67□□□□□ -1.5
SF3B2-208ENST00000529994 C8orf87E5RJ46 101 aa5.66□□□□□ -1.5
SF3B2-208ENST00000529994 JMJD7-PLA2G4BH0Y9G9 81 aa5.66□□□□□ -1.5
SF3B2-208ENST00000529994 Q6ZQT0 140 aa5.66□□□□□ -1.5
SF3B2-208ENST00000529994 J3KT08 172 aa5.64□□□□□ -1.51
SF3B2-208ENST00000529994 C21orf62-AS1Q17RA5 79 aa5.64□□□□□ -1.51
SF3B2-208ENST00000529994 LOC110117498A0A087WWA1 95 aa5.63□□□□□ -1.51
SF3B2-208ENST00000529994 NDUFB1O75438 58 aa5.63□□□□□ -1.51
SF3B2-208ENST00000529994 MTURNQ8N3F0 131 aa5.63□□□□□ -1.51
SF3B2-208ENST00000529994 LINC00846Q9NV44 126 aa5.63□□□□□ -1.51
SF3B2-208ENST00000529994 LOC105371267A0A1B0GV96 52 aa5.62□□□□□ -1.51
SF3B2-208ENST00000529994 KRTAP19-6Q3LI70 58 aa5.62□□□□□ -1.51
SF3B2-208ENST00000529994 PDE6GP18545 87 aa5.6□□□□□ -1.51
SF3B2-208ENST00000529994 C9orf118A6NHY6 69 aa5.59□□□□□ -1.51
SF3B2-208ENST00000529994 A8MWP4 228 aa5.59□□□□□ -1.51
SF3B2-208ENST00000529994 HRES1P13985 223 aa5.59□□□□□ -1.51
SF3B2-208ENST00000529994 ZCCHC13Q8WW36 166 aaKnown RBP5.59□□□□□ -1.51
SF3B2-208ENST00000529994 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
SF3B2-208ENST00000529994 RBM12B-AS1Q9P1G2 102 aa5.59□□□□□ -1.51
SF3B2-208ENST00000529994 TAX1BP3O14907 124 aa5.58□□□□□ -1.52
SF3B2-208ENST00000529994 NREPQ16612 68 aa5.58□□□□□ -1.52
SF3B2-208ENST00000529994 KRTAP6-3Q3LI67 103 aa5.58□□□□□ -1.52
SF3B2-208ENST00000529994 IGKV3D-7A0A0C4DH55 119 aa5.57□□□□□ -1.52
SF3B2-208ENST00000529994 A0A1W2PPM0 123 aa5.57□□□□□ -1.52
SF3B2-208ENST00000529994 A0A1B0GW54 56 aa5.56□□□□□ -1.52
SF3B2-208ENST00000529994 H3BT86 120 aa5.55□□□□□ -1.52
SF3B2-208ENST00000529994 Q6ZVQ6 151 aa5.54□□□□□ -1.52
SF3B2-208ENST00000529994 MPLKIPQ8TAP9 179 aa5.54□□□□□ -1.52
SF3B2-208ENST00000529994 SPINK7P58062 85 aa5.53□□□□□ -1.52
SF3B2-208ENST00000529994 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
SF3B2-208ENST00000529994 Q8N9P0 234 aaPredicted RBP5.53□□□□□ -1.52
SF3B2-208ENST00000529994 SPCS1Q9Y6A9 102 aa5.52□□□□□ -1.53
SF3B2-208ENST00000529994 NEBP20929 6669 aa5.52□□□□□ -1.53
SF3B2-208ENST00000529994 K7EQZ3 153 aa5.51□□□□□ -1.53
SF3B2-208ENST00000529994 NDUFS5O43920 106 aa5.51□□□□□ -1.53
SF3B2-208ENST00000529994 MMP24-AS1A0A0U1RRL7 71 aa5.5□□□□□ -1.53
SF3B2-208ENST00000529994 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
SF3B2-208ENST00000529994 TMEM254Q8TBM7 123 aa5.49□□□□□ -1.53
SF3B2-208ENST00000529994 MRPL34Q9BQ48 92 aaKnown RBP5.49□□□□□ -1.53
SF3B2-208ENST00000529994 BPY2O14599 106 aa5.48□□□□□ -1.53
SF3B2-208ENST00000529994 hDV103S1A0JD37 113 aa5.47□□□□□ -1.53
SF3B2-208ENST00000529994 Q8N9L7 120 aa5.46□□□□□ -1.54
SF3B2-208ENST00000529994 COL5A1-AS1Q5SY13 56 aa5.45□□□□□ -1.54
SF3B2-208ENST00000529994 IGKV2D-30A0A075B6S6 120 aa5.42□□□□□ -1.54
SF3B2-208ENST00000529994 IGKV2-30P06310 120 aa5.42□□□□□ -1.54
SF3B2-208ENST00000529994 K7EP34 96 aa5.41□□□□□ -1.54
SF3B2-208ENST00000529994 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.54
SF3B2-208ENST00000529994 CASC2Q6XLA1 102 aa5.4□□□□□ -1.54
SF3B2-208ENST00000529994 PCP4L1A6NKN8 68 aa5.39□□□□□ -1.55
SF3B2-208ENST00000529994 HCG22E2RYF7 251 aa5.39□□□□□ -1.55
SF3B2-208ENST00000529994 PRO0461Q9UI25 63 aa5.39□□□□□ -1.55
SF3B2-208ENST00000529994 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
SF3B2-208ENST00000529994 UBL5Q9BZL1 73 aa5.38□□□□□ -1.55
SF3B2-208ENST00000529994 Q5W150 140 aa5.37□□□□□ -1.55
SF3B2-208ENST00000529994 C7orf65Q6ZTY9 151 aa5.36□□□□□ -1.55
SF3B2-208ENST00000529994 GTF2H5Q6ZYL4 71 aa5.34□□□□□ -1.55
SF3B2-208ENST00000529994 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
SF3B2-208ENST00000529994 CXCL6P80162 114 aa5.31□□□□□ -1.56
SF3B2-208ENST00000529994 ETDBQ3ZM63 59 aa5.3□□□□□ -1.56
SF3B2-208ENST00000529994 C4orf26Q17RF5 130 aa5.29□□□□□ -1.56
SF3B2-208ENST00000529994 F8W1H4 67 aa5.27□□□□□ -1.57
SF3B2-208ENST00000529994 A6NN06 94 aa5.26□□□□□ -1.57
SF3B2-208ENST00000529994 C5orf47Q569G3 176 aa5.21□□□□□ -1.58
SF3B2-208ENST00000529994 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
SF3B2-208ENST00000529994 C1orf64Q8NEQ6 169 aa5.19□□□□□ -1.58
SF3B2-208ENST00000529994 TP53AIP1Q9HCN2 124 aa5.19□□□□□ -1.58
SF3B2-208ENST00000529994 KMT2DO14686 5537 aa5.18□□□□□ -1.58
SF3B2-208ENST00000529994 S4R3F8 94 aa5.18□□□□□ -1.58
SF3B2-208ENST00000529994 FAM236AA0A1B0GUQ0 79 aa5.16□□□□□ -1.58
SF3B2-208ENST00000529994 FAM236BA0A1B0GV22 79 aa5.16□□□□□ -1.58
SF3B2-208ENST00000529994 MT1BP07438 61 aa5.16□□□□□ -1.58
SF3B2-208ENST00000529994 KRTAP5-9P26371 169 aa5.16□□□□□ -1.58
SF3B2-208ENST00000529994 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
SF3B2-208ENST00000529994 HIST1H4AP62805 103 aaKnown RBP5.15□□□□□ -1.59
SF3B2-208ENST00000529994 ACYP1P07311 99 aa5.13□□□□□ -1.59
SF3B2-208ENST00000529994 LCA10Q71F78 164 aa5.13□□□□□ -1.59
SF3B2-208ENST00000529994 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
SF3B2-208ENST00000529994 Q5VV11 94 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms