RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PRYO14603 147 aa4.94□□□□□ -1.62
SSBP3-212ENST00000528930 FAM229BQ4G0N7 80 aa4.94□□□□□ -1.62
SSBP3-212ENST00000528930 LINC00846Q9NV44 126 aa4.94□□□□□ -1.62
SSBP3-212ENST00000528930 ORMDL1Q9P0S3 153 aa4.94□□□□□ -1.62
SSBP3-212ENST00000528930 SMIM26A0A096LP01 95 aa4.93□□□□□ -1.62
SSBP3-212ENST00000528930 KLKP1Q107X0 134 aa4.93□□□□□ -1.62
SSBP3-212ENST00000528930 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
SSBP3-212ENST00000528930 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
SSBP3-212ENST00000528930 LINC00337Q8N6G1 96 aa4.93□□□□□ -1.62
SSBP3-212ENST00000528930 ERC2-IT1O76042 136 aa4.92□□□□□ -1.62
SSBP3-212ENST00000528930 TYMSOSQ8TAI1 123 aa4.92□□□□□ -1.62
SSBP3-212ENST00000528930 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
SSBP3-212ENST00000528930 LOC110117498A0A087WWA1 95 aa4.91□□□□□ -1.62
SSBP3-212ENST00000528930 FAM236DA0A1B0GTK5 79 aa4.91□□□□□ -1.62
SSBP3-212ENST00000528930 FAM236CP0DP71 79 aa4.91□□□□□ -1.62
SSBP3-212ENST00000528930 KRTAP10-7P60409 375 aaPredicted RBP4.91□□□□□ -1.62
SSBP3-212ENST00000528930 SMIM11BQ8TCY0 68 aa4.91□□□□□ -1.62
SSBP3-212ENST00000528930 HIGD2AQ9BW72 106 aa4.91□□□□□ -1.62
SSBP3-212ENST00000528930 UBL5Q9BZL1 73 aa4.91□□□□□ -1.62
SSBP3-212ENST00000528930 IGLV6-57P01721 117 aa4.9□□□□□ -1.63
SSBP3-212ENST00000528930 CXCL6P80162 114 aa4.9□□□□□ -1.63
SSBP3-212ENST00000528930 SPRR4Q96PI1 79 aa4.9□□□□□ -1.63
SSBP3-212ENST00000528930 IGKV3D-7A0A0C4DH55 119 aa4.89□□□□□ -1.63
SSBP3-212ENST00000528930 ETDCA0A1B0GVM5 59 aa4.89□□□□□ -1.63
SSBP3-212ENST00000528930 DSCR8Q96T75 97 aa4.89□□□□□ -1.63
SSBP3-212ENST00000528930 C14orf132Q9NPU4 83 aa4.89□□□□□ -1.63
SSBP3-212ENST00000528930 LAMTOR3Q9UHA4 124 aa4.89□□□□□ -1.63
SSBP3-212ENST00000528930 H7BZZ5 65 aa4.88□□□□□ -1.63
SSBP3-212ENST00000528930 C4orf26Q17RF5 130 aa4.88□□□□□ -1.63
SSBP3-212ENST00000528930 CYSTM1Q9H1C7 97 aa4.88□□□□□ -1.63
SSBP3-212ENST00000528930 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
SSBP3-212ENST00000528930 HRCT1Q6UXD1 115 aa4.87□□□□□ -1.63
SSBP3-212ENST00000528930 LINC00304Q8N9R0 145 aa4.87□□□□□ -1.63
SSBP3-212ENST00000528930 Q9BRP9 147 aa4.87□□□□□ -1.63
SSBP3-212ENST00000528930 USH2AO75445 5202 aa4.87□□□□□ -1.63
SSBP3-212ENST00000528930 TRAV23DV6A0A075B6W5 121 aa4.86□□□□□ -1.63
SSBP3-212ENST00000528930 LINC00483Q53H64 154 aa4.86□□□□□ -1.63
SSBP3-212ENST00000528930 Q6ZRX8 168 aa4.86□□□□□ -1.63
SSBP3-212ENST00000528930 ZNF706Q9Y5V0 76 aaPredicted RBP4.86□□□□□ -1.63
SSBP3-212ENST00000528930 ZNF73O43830 326 aaPredicted RBP4.85□□□□□ -1.63
SSBP3-212ENST00000528930 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
SSBP3-212ENST00000528930 A0A087WVE0 104 aa4.84□□□□□ -1.63
SSBP3-212ENST00000528930 A0A1B0GW54 56 aa4.83□□□□□ -1.64
SSBP3-212ENST00000528930 MT1HP80294 61 aa4.83□□□□□ -1.64
SSBP3-212ENST00000528930 RBM3P98179 157 aaKnown RBP4.83□□□□□ -1.64
SSBP3-212ENST00000528930 Q6ZQT0 140 aa4.83□□□□□ -1.64
SSBP3-212ENST00000528930 C20orf197Q8N268 126 aa4.83□□□□□ -1.64
SSBP3-212ENST00000528930 RETNLBQ9BQ08 111 aa4.83□□□□□ -1.64
SSBP3-212ENST00000528930 LINC00575Q6W349 94 aa4.82□□□□□ -1.64
SSBP3-212ENST00000528930 TRBV7-6A0A0J9YX20 115 aa4.81□□□□□ -1.64
SSBP3-212ENST00000528930 SPAG11AQ6PDA7 123 aa4.81□□□□□ -1.64
SSBP3-212ENST00000528930 Q8NBF4 154 aa4.81□□□□□ -1.64
SSBP3-212ENST00000528930 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
SSBP3-212ENST00000528930 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
SSBP3-212ENST00000528930 NEBP20929 6669 aa4.8□□□□□ -1.64
SSBP3-212ENST00000528930 TRBV7-4A0A0J9YYF1 115 aa4.79□□□□□ -1.64
SSBP3-212ENST00000528930 ELOF1P60002 83 aaKnown RBP4.79□□□□□ -1.64
SSBP3-212ENST00000528930 C6orf99Q4VX62 202 aa4.79□□□□□ -1.64
SSBP3-212ENST00000528930 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
SSBP3-212ENST00000528930 SSBP3-AS1Q7Z2R9 100 aa4.79□□□□□ -1.64
SSBP3-212ENST00000528930 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
SSBP3-212ENST00000528930 SPRR1BP22528 89 aa4.78□□□□□ -1.64
SSBP3-212ENST00000528930 COX7BP24311 80 aa4.78□□□□□ -1.64
SSBP3-212ENST00000528930 MOBPQ13875 183 aa4.78□□□□□ -1.64
SSBP3-212ENST00000528930 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.78□□□□□ -1.64
SSBP3-212ENST00000528930 Q6ZVQ6 151 aa4.78□□□□□ -1.64
SSBP3-212ENST00000528930 DHRS4-AS1Q9P1J3 65 aa4.78□□□□□ -1.64
SSBP3-212ENST00000528930 IGLV7-46A0A075B6I9 117 aa4.77□□□□□ -1.65
SSBP3-212ENST00000528930 SPINK1P00995 79 aa4.77□□□□□ -1.65
SSBP3-212ENST00000528930 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
SSBP3-212ENST00000528930 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
SSBP3-212ENST00000528930 KRTAP6-3Q3LI67 103 aa4.77□□□□□ -1.65
SSBP3-212ENST00000528930 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
SSBP3-212ENST00000528930 F8WEM9 126 aa4.75□□□□□ -1.65
SSBP3-212ENST00000528930 RPS29P62273 56 aaKnown RBP4.75□□□□□ -1.65
SSBP3-212ENST00000528930 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
SSBP3-212ENST00000528930 V9GYY9 64 aa4.75□□□□□ -1.65
SSBP3-212ENST00000528930 Q8N377 158 aa4.74□□□□□ -1.65
SSBP3-212ENST00000528930 TMEM254Q8TBM7 123 aa4.74□□□□□ -1.65
SSBP3-212ENST00000528930 C1orf195Q5TG92 126 aa4.73□□□□□ -1.65
SSBP3-212ENST00000528930 BPY2O14599 106 aa4.72□□□□□ -1.65
SSBP3-212ENST00000528930 NREPQ16612 68 aa4.72□□□□□ -1.65
SSBP3-212ENST00000528930 Q1T7F1 81 aa4.72□□□□□ -1.65
SSBP3-212ENST00000528930 ASB16-AS1Q495Z4 193 aa4.72□□□□□ -1.65
SSBP3-212ENST00000528930 SMIM29Q86T20 159 aa4.72□□□□□ -1.65
SSBP3-212ENST00000528930 PRR15Q8IV56 129 aa4.72□□□□□ -1.65
SSBP3-212ENST00000528930 DEFB105AQ8NG35 78 aa4.72□□□□□ -1.65
SSBP3-212ENST00000528930 OCR1Q9BZK8 76 aa4.72□□□□□ -1.65
SSBP3-212ENST00000528930 IGLV5-48A0A075B6I7 105 aa4.71□□□□□ -1.66
SSBP3-212ENST00000528930 SEC61GP60059 68 aa4.71□□□□□ -1.66
SSBP3-212ENST00000528930 KRTAP13-3Q3SY46 172 aa4.71□□□□□ -1.66
SSBP3-212ENST00000528930 CYP4F30PQ9H0H9 118 aa4.69□□□□□ -1.66
SSBP3-212ENST00000528930 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
SSBP3-212ENST00000528930 SNURFQ9Y675 71 aa4.68□□□□□ -1.66
SSBP3-212ENST00000528930 CD164Q04900 197 aa4.67□□□□□ -1.66
SSBP3-212ENST00000528930 Q6ZQY7 126 aa4.67□□□□□ -1.66
SSBP3-212ENST00000528930 A0A0G2JQZ4 141 aa4.66□□□□□ -1.66
SSBP3-212ENST00000528930 hDV103S1A0JD37 113 aa4.66□□□□□ -1.66
SSBP3-212ENST00000528930 IGKV4-1P06312 121 aa4.66□□□□□ -1.66
SSBP3-212ENST00000528930 BRK1Q8WUW1 75 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms