RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 SPACA4Q8TDM5 124 aa8.7□□□□□ -1.02
CAPN1-214ENST00000528165 APLNQ9ULZ1 77 aa8.7□□□□□ -1.02
CAPN1-214ENST00000528165 SPINK6Q6UWN8 80 aa8.69□□□□□ -1.02
CAPN1-214ENST00000528165 ANAPC11Q9NYG5 84 aa8.69□□□□□ -1.02
CAPN1-214ENST00000528165 LINC00313P59037 77 aa8.68□□□□□ -1.02
CAPN1-214ENST00000528165 COL7A1Q02388 2944 aa8.68□□□□□ -1.02
CAPN1-214ENST00000528165 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
CAPN1-214ENST00000528165 STAB2Q8WWQ8 2551 aa8.65□□□□□ -1.02
CAPN1-214ENST00000528165 NBDYA0A0U1RRE5 68 aa8.64□□□□□ -1.03
CAPN1-214ENST00000528165 PSORS1C2Q9UIG4 136 aa8.64□□□□□ -1.03
CAPN1-214ENST00000528165 DMAC1Q96GE9 116 aa8.62□□□□□ -1.03
CAPN1-214ENST00000528165 IGLV5-52A0A0A0MRZ9 124 aa8.62□□□□□ -1.03
CAPN1-214ENST00000528165 A0A1B0GU69 56 aa8.62□□□□□ -1.03
CAPN1-214ENST00000528165 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
CAPN1-214ENST00000528165 PRAC1Q96KF2 57 aa8.62□□□□□ -1.03
CAPN1-214ENST00000528165 ZNF861PO60384 105 aa8.61□□□□□ -1.03
CAPN1-214ENST00000528165 PLA2G1BP04054 148 aaKnown RBP8.58□□□□□ -1.04
CAPN1-214ENST00000528165 C8orf87E5RJ46 101 aa8.57□□□□□ -1.04
CAPN1-214ENST00000528165 CIRBP-AS1Q8TBR5 109 aa8.57□□□□□ -1.04
CAPN1-214ENST00000528165 ADM2Q7Z4H4 148 aa8.56□□□□□ -1.04
CAPN1-214ENST00000528165 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
CAPN1-214ENST00000528165 ALMS1Q8TCU4 4167 aa8.55□□□□□ -1.04
CAPN1-214ENST00000528165 FAM229AH3BQW9 127 aa8.54□□□□□ -1.04
CAPN1-214ENST00000528165 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
CAPN1-214ENST00000528165 A0A087WTM6 91 aa8.52□□□□□ -1.05
CAPN1-214ENST00000528165 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
CAPN1-214ENST00000528165 UQCR11O14957 56 aa8.51□□□□□ -1.05
CAPN1-214ENST00000528165 RTL8CO15255 209 aa8.51□□□□□ -1.05
CAPN1-214ENST00000528165 MGAM2Q2M2H8 2515 aa8.5□□□□□ -1.05
CAPN1-214ENST00000528165 DNAH7Q8WXX0 4024 aa8.5□□□□□ -1.05
CAPN1-214ENST00000528165 IGKV2-30P06310 120 aa8.49□□□□□ -1.05
CAPN1-214ENST00000528165 LINC01554Q52M75 96 aa8.48□□□□□ -1.05
CAPN1-214ENST00000528165 IGLV7-43P04211 117 aa8.46□□□□□ -1.06
CAPN1-214ENST00000528165 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
CAPN1-214ENST00000528165 NUPR2A6NF83 97 aa8.45□□□□□ -1.06
CAPN1-214ENST00000528165 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
CAPN1-214ENST00000528165 FRAS1Q86XX4 4008 aa8.44□□□□□ -1.06
CAPN1-214ENST00000528165 DYNC2H1Q8NCM8 4307 aaKnown RBP8.42□□□□□ -1.06
CAPN1-214ENST00000528165 PLECQ15149 4684 aaKnown RBP8.39□□□□□ -1.07
CAPN1-214ENST00000528165 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
CAPN1-214ENST00000528165 C4orf48Q5BLP8 95 aa8.35□□□□□ -1.07
CAPN1-214ENST00000528165 KRTAP16-1A8MUX0 517 aa8.34□□□□□ -1.07
CAPN1-214ENST00000528165 HECTD4Q9Y4D8 3996 aa8.34□□□□□ -1.07
CAPN1-214ENST00000528165 CSAG1Q6PB30 78 aa8.33□□□□□ -1.08
CAPN1-214ENST00000528165 SPINK1P00995 79 aa8.27□□□□□ -1.09
CAPN1-214ENST00000528165 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.09
CAPN1-214ENST00000528165 DNAH17Q9UFH2 4485 aa8.26□□□□□ -1.09
CAPN1-214ENST00000528165 VPS13DQ5THJ4 4388 aa8.25□□□□□ -1.09
CAPN1-214ENST00000528165 C1orf134Q5TEV5 83 aa8.22□□□□□ -1.09
CAPN1-214ENST00000528165 TGP01266 2768 aa8.22□□□□□ -1.09
CAPN1-214ENST00000528165 Q8N1X5 172 aa8.2□□□□□ -1.1
CAPN1-214ENST00000528165 MEGF8Q7Z7M0 2845 aa8.2□□□□□ -1.1
CAPN1-214ENST00000528165 STARD9Q9P2P6 4700 aa8.2□□□□□ -1.1
CAPN1-214ENST00000528165 H3BS24 57 aa8.18□□□□□ -1.1
CAPN1-214ENST00000528165 LY6G6CO95867 125 aa8.17□□□□□ -1.1
CAPN1-214ENST00000528165 FBN3Q75N90 2809 aa8.17□□□□□ -1.1
CAPN1-214ENST00000528165 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
CAPN1-214ENST00000528165 KMT2AQ03164 3969 aa8.15□□□□□ -1.1
CAPN1-214ENST00000528165 Q6ZSA8 131 aa8.13□□□□□ -1.11
CAPN1-214ENST00000528165 H0YAA0 97 aa8.11□□□□□ -1.11
CAPN1-214ENST00000528165 A8MUU9 505 aa8.11□□□□□ -1.11
CAPN1-214ENST00000528165 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
CAPN1-214ENST00000528165 KRTAP1-4P0C5Y4 121 aa8.1□□□□□ -1.11
CAPN1-214ENST00000528165 KRTAP10-2P60368 255 aa8.1□□□□□ -1.11
CAPN1-214ENST00000528165 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
CAPN1-214ENST00000528165 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
CAPN1-214ENST00000528165 KRTAP25-1Q3LHN0 102 aa8.06□□□□□ -1.12
CAPN1-214ENST00000528165 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
CAPN1-214ENST00000528165 A0A1B0GU33 70 aa8.05□□□□□ -1.12
CAPN1-214ENST00000528165 DNAH6Q9C0G6 4158 aa8.05□□□□□ -1.12
CAPN1-214ENST00000528165 KRTAP10-1P60331 282 aa8□□□□□ -1.13
CAPN1-214ENST00000528165 H1FX-AS1Q4G0G2 97 aa7.99□□□□□ -1.13
CAPN1-214ENST00000528165 DNAH5Q8TE73 4624 aa7.98□□□□□ -1.13
CAPN1-214ENST00000528165 DNHD1Q96M86 4753 aa7.97□□□□□ -1.13
CAPN1-214ENST00000528165 LRP1BQ9NZR2 4599 aa7.95□□□□□ -1.14
CAPN1-214ENST00000528165 ROMO1P60602 79 aa7.95□□□□□ -1.14
CAPN1-214ENST00000528165 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
CAPN1-214ENST00000528165 K7ERS5 55 aa7.92□□□□□ -1.14
CAPN1-214ENST00000528165 RPS29P62273 56 aaKnown RBP7.89□□□□□ -1.15
CAPN1-214ENST00000528165 C9orf92A6NGG3 77 aa7.89□□□□□ -1.15
CAPN1-214ENST00000528165 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
CAPN1-214ENST00000528165 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
CAPN1-214ENST00000528165 CRIPTQ9P021 101 aa7.86□□□□□ -1.15
CAPN1-214ENST00000528165 VPS13BQ7Z7G8 4022 aa7.86□□□□□ -1.15
CAPN1-214ENST00000528165 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
CAPN1-214ENST00000528165 PKD1P98161 4303 aa7.78□□□□□ -1.16
CAPN1-214ENST00000528165 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
CAPN1-214ENST00000528165 FAT2Q9NYQ8 4349 aa7.7□□□□□ -1.18
CAPN1-214ENST00000528165 P0C880 135 aa7.69□□□□□ -1.18
CAPN1-214ENST00000528165 A0A0D9SG42 100 aa7.64□□□□□ -1.19
CAPN1-214ENST00000528165 SMR3BP02814 79 aaPredicted RBP7.63□□□□□ -1.19
CAPN1-214ENST00000528165 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
CAPN1-214ENST00000528165 HYDINQ4G0P3 5121 aa7.62□□□□□ -1.19
CAPN1-214ENST00000528165 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
CAPN1-214ENST00000528165 SPINT4Q6UDR6 99 aa7.61□□□□□ -1.19
CAPN1-214ENST00000528165 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
CAPN1-214ENST00000528165 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
CAPN1-214ENST00000528165 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
CAPN1-214ENST00000528165 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
CAPN1-214ENST00000528165 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms