RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 CASC10Q5T4H9 136 aa4.52□□□□□ -1.69
SOX6-208ENST00000527619 VWFP04275 2813 aa4.52□□□□□ -1.69
SOX6-208ENST00000527619 PKD1L1Q8TDX9 2849 aa4.52□□□□□ -1.69
SOX6-208ENST00000527619 A8MUU9 505 aa4.51□□□□□ -1.69
SOX6-208ENST00000527619 MGAM2Q2M2H8 2515 aa4.51□□□□□ -1.69
SOX6-208ENST00000527619 DNHD1Q96M86 4753 aa4.51□□□□□ -1.69
SOX6-208ENST00000527619 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
SOX6-208ENST00000527619 A0A1B0GU69 56 aa4.5□□□□□ -1.69
SOX6-208ENST00000527619 K7ERS5 55 aa4.5□□□□□ -1.69
SOX6-208ENST00000527619 Q96NJ1 140 aa4.5□□□□□ -1.69
SOX6-208ENST00000527619 TRRAPQ9Y4A5 3859 aa4.49□□□□□ -1.69
SOX6-208ENST00000527619 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
SOX6-208ENST00000527619 ACYP2P14621 99 aa4.49□□□□□ -1.69
SOX6-208ENST00000527619 ANK2Q01484 3957 aa4.49□□□□□ -1.69
SOX6-208ENST00000527619 A0A096LNI7 61 aa4.49□□□□□ -1.69
SOX6-208ENST00000527619 MRPL34Q9BQ48 92 aaKnown RBP4.49□□□□□ -1.69
SOX6-208ENST00000527619 NBEAL1Q6ZS30 2694 aa4.48□□□□□ -1.69
SOX6-208ENST00000527619 A0A1B0GVX0 72 aa4.47□□□□□ -1.69
SOX6-208ENST00000527619 NOTCH1P46531 2555 aa4.47□□□□□ -1.69
SOX6-208ENST00000527619 DMAC1Q96GE9 116 aa4.46□□□□□ -1.7
SOX6-208ENST00000527619 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
SOX6-208ENST00000527619 KRTAP11-1Q8IUC1 163 aa4.44□□□□□ -1.7
SOX6-208ENST00000527619 NUPR2A6NF83 97 aa4.44□□□□□ -1.7
SOX6-208ENST00000527619 K7EIL1 84 aa4.43□□□□□ -1.7
SOX6-208ENST00000527619 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
SOX6-208ENST00000527619 KRTAP13-3Q3SY46 172 aa4.42□□□□□ -1.7
SOX6-208ENST00000527619 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
SOX6-208ENST00000527619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.42□□□□□ -1.7
SOX6-208ENST00000527619 CIRBP-AS1Q8TBR5 109 aa4.41□□□□□ -1.7
SOX6-208ENST00000527619 Q5W150 140 aa4.41□□□□□ -1.7
SOX6-208ENST00000527619 SRRM2Q9UQ35 2752 aaKnown RBP4.41□□□□□ -1.7
SOX6-208ENST00000527619 FBN3Q75N90 2809 aa4.4□□□□□ -1.71
SOX6-208ENST00000527619 CMYA5Q8N3K9 4069 aa4.39□□□□□ -1.71
SOX6-208ENST00000527619 CSMD3Q7Z407 3707 aa4.39□□□□□ -1.71
SOX6-208ENST00000527619 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
SOX6-208ENST00000527619 KRTAP13-1Q8IUC0 172 aa4.38□□□□□ -1.71
SOX6-208ENST00000527619 KRTAP10-11P60412 298 aa4.38□□□□□ -1.71
SOX6-208ENST00000527619 MEGF8Q7Z7M0 2845 aa4.37□□□□□ -1.71
SOX6-208ENST00000527619 A0A087WTM6 91 aa4.37□□□□□ -1.71
SOX6-208ENST00000527619 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
SOX6-208ENST00000527619 LINC00304Q8N9R0 145 aa4.36□□□□□ -1.71
SOX6-208ENST00000527619 LYSTQ99698 3801 aa4.35□□□□□ -1.71
SOX6-208ENST00000527619 IGLV7-43P04211 117 aa4.34□□□□□ -1.72
SOX6-208ENST00000527619 C14orf177Q52M58 125 aa4.32□□□□□ -1.72
SOX6-208ENST00000527619 TENM3Q9P273 2699 aa4.32□□□□□ -1.72
SOX6-208ENST00000527619 SSBP3-AS1Q7Z2R9 100 aa4.32□□□□□ -1.72
SOX6-208ENST00000527619 TGP01266 2768 aa4.32□□□□□ -1.72
SOX6-208ENST00000527619 LCE2BO14633 110 aa4.31□□□□□ -1.72
SOX6-208ENST00000527619 SPINK6Q6UWN8 80 aa4.31□□□□□ -1.72
SOX6-208ENST00000527619 IGKV2-30P06310 120 aa4.31□□□□□ -1.72
SOX6-208ENST00000527619 DNAH3Q8TD57 4116 aa4.3□□□□□ -1.72
SOX6-208ENST00000527619 CRIPTQ9P021 101 aa4.3□□□□□ -1.72
SOX6-208ENST00000527619 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
SOX6-208ENST00000527619 DNAH9Q9NYC9 4486 aa4.29□□□□□ -1.72
SOX6-208ENST00000527619 PRKDCP78527 4128 aaKnown RBP4.27□□□□□ -1.73
SOX6-208ENST00000527619 PANO1I0J062 215 aa4.27□□□□□ -1.73
SOX6-208ENST00000527619 COL7A1Q02388 2944 aa4.27□□□□□ -1.73
SOX6-208ENST00000527619 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
SOX6-208ENST00000527619 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
SOX6-208ENST00000527619 STAB2Q8WWQ8 2551 aa4.24□□□□□ -1.73
SOX6-208ENST00000527619 SPACA4Q8TDM5 124 aa4.23□□□□□ -1.73
SOX6-208ENST00000527619 IGKV2D-30A0A075B6S6 120 aa4.23□□□□□ -1.73
SOX6-208ENST00000527619 NBDYA0A0U1RRE5 68 aa4.23□□□□□ -1.73
SOX6-208ENST00000527619 LY6G6CO95867 125 aa4.23□□□□□ -1.73
SOX6-208ENST00000527619 FRAS1Q86XX4 4008 aa4.22□□□□□ -1.73
SOX6-208ENST00000527619 HUWE1Q7Z6Z7 4374 aaKnown RBP4.22□□□□□ -1.73
SOX6-208ENST00000527619 FLG2Q5D862 2391 aaPredicted RBP4.21□□□□□ -1.74
SOX6-208ENST00000527619 H0YAA0 97 aa4.21□□□□□ -1.74
SOX6-208ENST00000527619 UBE2DNLQ8IWF7 75 aa4.21□□□□□ -1.74
SOX6-208ENST00000527619 PSORS1C2Q9UIG4 136 aa4.21□□□□□ -1.74
SOX6-208ENST00000527619 SPINK1P00995 79 aa4.19□□□□□ -1.74
SOX6-208ENST00000527619 Q6ZSA8 131 aa4.19□□□□□ -1.74
SOX6-208ENST00000527619 Q8N1X5 172 aa4.19□□□□□ -1.74
SOX6-208ENST00000527619 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
SOX6-208ENST00000527619 DYNC2H1Q8NCM8 4307 aaKnown RBP4.15□□□□□ -1.74
SOX6-208ENST00000527619 HECTD4Q9Y4D8 3996 aa4.14□□□□□ -1.75
SOX6-208ENST00000527619 A0A1B0GU33 70 aa4.14□□□□□ -1.75
SOX6-208ENST00000527619 TPRXLQ17RH7 258 aa4.14□□□□□ -1.75
SOX6-208ENST00000527619 APLNQ9ULZ1 77 aa4.14□□□□□ -1.75
SOX6-208ENST00000527619 DNAH7Q8WXX0 4024 aa4.14□□□□□ -1.75
SOX6-208ENST00000527619 Q6ZRN7 208 aaPredicted RBP4.13□□□□□ -1.75
SOX6-208ENST00000527619 DNAH17Q9UFH2 4485 aa4.13□□□□□ -1.75
SOX6-208ENST00000527619 H1FX-AS1Q4G0G2 97 aa4.12□□□□□ -1.75
SOX6-208ENST00000527619 TYMSOSQ8TAI1 123 aa4.12□□□□□ -1.75
SOX6-208ENST00000527619 VPS13DQ5THJ4 4388 aa4.12□□□□□ -1.75
SOX6-208ENST00000527619 PLECQ15149 4684 aaKnown RBP4.08□□□□□ -1.76
SOX6-208ENST00000527619 STARD9Q9P2P6 4700 aa4.06□□□□□ -1.76
SOX6-208ENST00000527619 KRTAP13-2Q52LG2 175 aa4.05□□□□□ -1.76
SOX6-208ENST00000527619 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
SOX6-208ENST00000527619 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
SOX6-208ENST00000527619 KMT2CQ8NEZ4 4911 aaKnown RBP4.01□□□□□ -1.77
SOX6-208ENST00000527619 COX6B2Q6YFQ2 88 aa4.01□□□□□ -1.77
SOX6-208ENST00000527619 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
SOX6-208ENST00000527619 DNAH2Q9P225 4427 aa4□□□□□ -1.77
SOX6-208ENST00000527619 KMT2AQ03164 3969 aa3.99□□□□□ -1.77
SOX6-208ENST00000527619 DNAH11Q96DT5 4516 aa3.99□□□□□ -1.77
SOX6-208ENST00000527619 DNAH6Q9C0G6 4158 aa3.98□□□□□ -1.77
SOX6-208ENST00000527619 SACSQ9NZJ4 4579 aa3.98□□□□□ -1.77
SOX6-208ENST00000527619 RPL37P61927 97 aaKnown RBP3.97□□□□□ -1.77
SOX6-208ENST00000527619 HYDINQ4G0P3 5121 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms