RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 GCN1Q92616 2671 aaKnown RBP1.98□□□□□ -2.09
CLNS1A-209ENST00000527299 FLG2Q5D862 2391 aaPredicted RBP1.98□□□□□ -2.09
CLNS1A-209ENST00000527299 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
CLNS1A-209ENST00000527299 PRO2289Q9P1D8 64 aa1.98□□□□□ -2.09
CLNS1A-209ENST00000527299 DSPP15924 2871 aaKnown RBP1.98□□□□□ -2.09
CLNS1A-209ENST00000527299 MAST4O15021 2626 aa1.98□□□□□ -2.09
CLNS1A-209ENST00000527299 ITPR1Q14643 2758 aa1.98□□□□□ -2.09
CLNS1A-209ENST00000527299 SMG1Q96Q15 3661 aaKnown RBP1.97□□□□□ -2.09
CLNS1A-209ENST00000527299 FAM208BQ5VWN6 2430 aa1.97□□□□□ -2.09
CLNS1A-209ENST00000527299 MAP1AP78559 2803 aaPredicted RBP1.97□□□□□ -2.09
CLNS1A-209ENST00000527299 LAMA5O15230 3695 aa1.97□□□□□ -2.09
CLNS1A-209ENST00000527299 SPG11Q96JI7 2443 aa1.97□□□□□ -2.09
CLNS1A-209ENST00000527299 OTOGLQ3ZCN5 2332 aa1.96□□□□□ -2.1
CLNS1A-209ENST00000527299 ABCA2Q9BZC7 2435 aa1.96□□□□□ -2.1
CLNS1A-209ENST00000527299 RPL37P61927 97 aaKnown RBP1.96□□□□□ -2.1
CLNS1A-209ENST00000527299 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
CLNS1A-209ENST00000527299 PIEZO2Q9H5I5 2752 aa1.96□□□□□ -2.1
CLNS1A-209ENST00000527299 DMXL2Q8TDJ6 3036 aa1.95□□□□□ -2.1
CLNS1A-209ENST00000527299 A0A1W2PPR1 153 aa1.95□□□□□ -2.1
CLNS1A-209ENST00000527299 PRLHP81277 87 aa1.95□□□□□ -2.1
CLNS1A-209ENST00000527299 LAMA1P25391 3075 aa1.94□□□□□ -2.1
CLNS1A-209ENST00000527299 BOD1L1Q8NFC6 3051 aa1.94□□□□□ -2.1
CLNS1A-209ENST00000527299 CREBBPQ92793 2442 aa1.94□□□□□ -2.1
CLNS1A-209ENST00000527299 PLAC4Q8WY50 150 aa1.94□□□□□ -2.1
CLNS1A-209ENST00000527299 C10orf95Q9H7T3 257 aa1.94□□□□□ -2.1
CLNS1A-209ENST00000527299 FREM2Q5SZK8 3169 aa1.94□□□□□ -2.1
CLNS1A-209ENST00000527299 HELZ2Q9BYK8 2649 aaKnown RBP1.94□□□□□ -2.1
CLNS1A-209ENST00000527299 HECTD1Q9ULT8 2610 aa1.94□□□□□ -2.1
CLNS1A-209ENST00000527299 WDFY3Q8IZQ1 3526 aa1.94□□□□□ -2.1
CLNS1A-209ENST00000527299 IGSF10Q6WRI0 2623 aa1.93□□□□□ -2.1
CLNS1A-209ENST00000527299 CELSR2Q9HCU4 2923 aa1.93□□□□□ -2.1
CLNS1A-209ENST00000527299 H3BNG1 76 aa1.93□□□□□ -2.1
CLNS1A-209ENST00000527299 TYMSOSQ8TAI1 123 aa1.93□□□□□ -2.1
CLNS1A-209ENST00000527299 TENM4Q6N022 2769 aa1.93□□□□□ -2.1
CLNS1A-209ENST00000527299 LOC400499M0QZD8 3231 aa1.93□□□□□ -2.1
CLNS1A-209ENST00000527299 ZNF462Q96JM2 2506 aa1.92□□□□□ -2.1
CLNS1A-209ENST00000527299 TACC2O95359 2948 aa1.92□□□□□ -2.1
CLNS1A-209ENST00000527299 USP9XQ93008 2570 aaPredicted RBP1.92□□□□□ -2.1
CLNS1A-209ENST00000527299 LINC01556Q5JQF7 62 aa1.92□□□□□ -2.1
CLNS1A-209ENST00000527299 ANKHD1Q8IWZ3 2542 aaKnown RBP1.92□□□□□ -2.1
CLNS1A-209ENST00000527299 NBASA2RRP1 2371 aa1.92□□□□□ -2.1
CLNS1A-209ENST00000527299 NAV2Q8IVL1 2488 aa1.91□□□□□ -2.1
CLNS1A-209ENST00000527299 SPINK1P00995 79 aa1.91□□□□□ -2.1
CLNS1A-209ENST00000527299 TEX15Q9BXT5 2789 aa1.91□□□□□ -2.1
CLNS1A-209ENST00000527299 MYO18BQ8IUG5 2567 aa1.91□□□□□ -2.1
CLNS1A-209ENST00000527299 CFAP46Q8IYW2 2715 aa1.9□□□□□ -2.1
CLNS1A-209ENST00000527299 CSPG4Q6UVK1 2322 aa1.9□□□□□ -2.1
CLNS1A-209ENST00000527299 CELSR3Q9NYQ7 3312 aa1.9□□□□□ -2.1
CLNS1A-209ENST00000527299 PTPN13Q12923 2485 aa1.9□□□□□ -2.11
CLNS1A-209ENST00000527299 SPTAN1Q13813 2472 aaKnown RBP1.9□□□□□ -2.11
CLNS1A-209ENST00000527299 KRTAP13-1Q8IUC0 172 aa1.9□□□□□ -2.11
CLNS1A-209ENST00000527299 UBR5O95071 2799 aaPredicted RBP1.89□□□□□ -2.11
CLNS1A-209ENST00000527299 A0A096LNI7 61 aa1.89□□□□□ -2.11
CLNS1A-209ENST00000527299 SPART-AS1P0CW21 52 aa1.89□□□□□ -2.11
CLNS1A-209ENST00000527299 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
CLNS1A-209ENST00000527299 SPACA4Q8TDM5 124 aa1.89□□□□□ -2.11
CLNS1A-209ENST00000527299 MYO9AB2RTY4 2548 aa1.89□□□□□ -2.11
CLNS1A-209ENST00000527299 COL12A1Q99715 3063 aa1.89□□□□□ -2.11
CLNS1A-209ENST00000527299 LRBAP50851 2863 aa1.88□□□□□ -2.11
CLNS1A-209ENST00000527299 CSMD1Q96PZ7 3565 aa1.88□□□□□ -2.11
CLNS1A-209ENST00000527299 HIVEP2P31629 2446 aa1.88□□□□□ -2.11
CLNS1A-209ENST00000527299 INE1O15225 51 aa1.88□□□□□ -2.11
CLNS1A-209ENST00000527299 KRTAP21-3Q3LHN1 58 aa1.88□□□□□ -2.11
CLNS1A-209ENST00000527299 ABCA12Q86UK0 2595 aa1.88□□□□□ -2.11
CLNS1A-209ENST00000527299 PRRC2CQ9Y520 2896 aaKnown RBP1.88□□□□□ -2.11
CLNS1A-209ENST00000527299 AKAP9Q99996 3911 aa1.87□□□□□ -2.11
CLNS1A-209ENST00000527299 SPENQ96T58 3664 aaKnown RBP1.87□□□□□ -2.11
CLNS1A-209ENST00000527299 RELNP78509 3460 aa1.87□□□□□ -2.11
CLNS1A-209ENST00000527299 R4GN34 69 aa1.87□□□□□ -2.11
CLNS1A-209ENST00000527299 TEP1Q99973 2627 aaKnown RBP1.87□□□□□ -2.11
CLNS1A-209ENST00000527299 APCP25054 2843 aa1.86□□□□□ -2.11
CLNS1A-209ENST00000527299 TLN1Q9Y490 2541 aaKnown RBP1.86□□□□□ -2.11
CLNS1A-209ENST00000527299 F8P00451 2351 aa1.86□□□□□ -2.11
CLNS1A-209ENST00000527299 FBN2P35556 2912 aa1.86□□□□□ -2.11
CLNS1A-209ENST00000527299 S4R3F8 94 aa1.86□□□□□ -2.11
CLNS1A-209ENST00000527299 VPS13DQ5THJ4 4388 aa1.86□□□□□ -2.11
CLNS1A-209ENST00000527299 HTN3P15516 51 aa1.85□□□□□ -2.11
CLNS1A-209ENST00000527299 SPINK6Q6UWN8 80 aa1.85□□□□□ -2.11
CLNS1A-209ENST00000527299 ATMQ13315 3056 aa1.85□□□□□ -2.11
CLNS1A-209ENST00000527299 HIVEP3Q5T1R4 2406 aa1.84□□□□□ -2.11
CLNS1A-209ENST00000527299 TLN2Q9Y4G6 2542 aa1.84□□□□□ -2.12
CLNS1A-209ENST00000527299 DCHS2Q6V1P9 2916 aa1.84□□□□□ -2.12
CLNS1A-209ENST00000527299 NF1P21359 2839 aa1.83□□□□□ -2.12
CLNS1A-209ENST00000527299 FBN3Q75N90 2809 aa1.83□□□□□ -2.12
CLNS1A-209ENST00000527299 DEFB4AO15263 64 aa1.83□□□□□ -2.12
CLNS1A-209ENST00000527299 DEFB135Q30KP9 77 aa1.83□□□□□ -2.12
CLNS1A-209ENST00000527299 UBE2DNLQ8IWF7 75 aa1.83□□□□□ -2.12
CLNS1A-209ENST00000527299 CCDC168Q8NDH2 2452 aa1.83□□□□□ -2.12
CLNS1A-209ENST00000527299 UTP20O75691 2785 aaKnown RBP1.83□□□□□ -2.12
CLNS1A-209ENST00000527299 FN1P02751 2386 aaKnown RBP1.83□□□□□ -2.12
CLNS1A-209ENST00000527299 FLNCQ14315 2725 aa1.82□□□□□ -2.12
CLNS1A-209ENST00000527299 DOPEY1Q5JWR5 2465 aa1.82□□□□□ -2.12
CLNS1A-209ENST00000527299 HRNRQ86YZ3 2850 aaPredicted RBP1.82□□□□□ -2.12
CLNS1A-209ENST00000527299 NBPF19A0A087WUL8 3843 aa1.82□□□□□ -2.12
CLNS1A-209ENST00000527299 USP9YO00507 2555 aaPredicted RBP1.82□□□□□ -2.12
CLNS1A-209ENST00000527299 CRYBG3Q68DQ2 2970 aa1.82□□□□□ -2.12
CLNS1A-209ENST00000527299 CELSR1Q9NYQ6 3014 aa1.82□□□□□ -2.12
CLNS1A-209ENST00000527299 SONP18583 2426 aaKnown RBP1.81□□□□□ -2.12
CLNS1A-209ENST00000527299 LRRK2Q5S007 2527 aa1.81□□□□□ -2.12
CLNS1A-209ENST00000527299 POLQO75417 2590 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms