RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 C6orf48Q9UBA6 75 aa3.15□□□□□ -1.9
C11orf54-203ENST00000526335 NOTCH1P46531 2555 aa3.15□□□□□ -1.91
C11orf54-203ENST00000526335 A0A1W2PNM2 257 aa3.14□□□□□ -1.91
C11orf54-203ENST00000526335 DEFB113Q30KQ7 82 aa3.14□□□□□ -1.91
C11orf54-203ENST00000526335 ST20-AS1Q8NBB2 130 aa3.14□□□□□ -1.91
C11orf54-203ENST00000526335 TLN2Q9Y4G6 2542 aa3.14□□□□□ -1.91
C11orf54-203ENST00000526335 AKAP9Q99996 3911 aa3.14□□□□□ -1.91
C11orf54-203ENST00000526335 NSD1Q96L73 2696 aaPredicted RBP3.14□□□□□ -1.91
C11orf54-203ENST00000526335 FLNAP21333 2647 aaKnown RBP3.13□□□□□ -1.91
C11orf54-203ENST00000526335 IGLV10-54A0A075B6I4 117 aa3.13□□□□□ -1.91
C11orf54-203ENST00000526335 C1orf137Q5JT78 98 aa3.13□□□□□ -1.91
C11orf54-203ENST00000526335 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.13□□□□□ -1.915e-7■■■□□ 19.2
C11orf54-203ENST00000526335 SONP18583 2426 aaKnown RBP3.13□□□□□ -1.91
C11orf54-203ENST00000526335 A0A1B0GVX0 72 aa3.12□□□□□ -1.91
C11orf54-203ENST00000526335 K7EQZ3 153 aa3.12□□□□□ -1.91
C11orf54-203ENST00000526335 DEFB130BP0DP73 79 aa3.12□□□□□ -1.91
C11orf54-203ENST00000526335 DEFB130AP0DP74 79 aa3.12□□□□□ -1.91
C11orf54-203ENST00000526335 TACC2O95359 2948 aa3.12□□□□□ -1.91
C11orf54-203ENST00000526335 LELP1Q5T871 98 aa3.12□□□□□ -1.91
C11orf54-203ENST00000526335 CIRBP-AS1Q8TBR5 109 aa3.12□□□□□ -1.91
C11orf54-203ENST00000526335 WFDC10AQ9H1F0 79 aa3.12□□□□□ -1.91
C11orf54-203ENST00000526335 LINC01558Q9Y6Z2 57 aa3.12□□□□□ -1.91
C11orf54-203ENST00000526335 H0Y9P7 68 aa3.11□□□□□ -1.91
C11orf54-203ENST00000526335 SPAG11AQ6PDA7 123 aa3.11□□□□□ -1.91
C11orf54-203ENST00000526335 C9orf163Q8N9P6 203 aa3.11□□□□□ -1.91
C11orf54-203ENST00000526335 DEFB105AQ8NG35 78 aa3.11□□□□□ -1.91
C11orf54-203ENST00000526335 PLAC8Q9NZF1 115 aa3.11□□□□□ -1.91
C11orf54-203ENST00000526335 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
C11orf54-203ENST00000526335 IGKV2D-24A0A075B6R9 120 aa3.1□□□□□ -1.91
C11orf54-203ENST00000526335 A0A096LPF7 62 aa3.1□□□□□ -1.91
C11orf54-203ENST00000526335 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
C11orf54-203ENST00000526335 CSAG1Q6PB30 78 aa3.1□□□□□ -1.91
C11orf54-203ENST00000526335 C20orf166-AS1Q96NR2 134 aa3.1□□□□□ -1.91
C11orf54-203ENST00000526335 DCHS2Q6V1P9 2916 aa3.09□□□□□ -1.91
C11orf54-203ENST00000526335 TLX1NBP0CAT3 122 aa3.09□□□□□ -1.92
C11orf54-203ENST00000526335 SPRR1AP35321 89 aa3.09□□□□□ -1.92
C11orf54-203ENST00000526335 Q6ZRX8 168 aa3.09□□□□□ -1.92
C11orf54-203ENST00000526335 COA5Q86WW8 74 aa3.09□□□□□ -1.92
C11orf54-203ENST00000526335 KRTAP11-1Q8IUC1 163 aa3.09□□□□□ -1.92
C11orf54-203ENST00000526335 MAP1AP78559 2803 aaPredicted RBP3.08□□□□□ -1.92
C11orf54-203ENST00000526335 CNBPP62633 177 aaKnown RBP3.08□□□□□ -1.92
C11orf54-203ENST00000526335 C15orf56Q8N910 161 aa3.08□□□□□ -1.92
C11orf54-203ENST00000526335 Q8NAQ8 132 aa3.08□□□□□ -1.92
C11orf54-203ENST00000526335 CR1P17927 2039 aa3.08□□□□□ -1.92
C11orf54-203ENST00000526335 MXRA5Q9NR99 2828 aa3.08□□□□□ -1.92
C11orf54-203ENST00000526335 PKD1L1Q8TDX9 2849 aa3.07□□□□□ -1.92
C11orf54-203ENST00000526335 WFDC13Q8IUB5 93 aa3.07□□□□□ -1.92
C11orf54-203ENST00000526335 ZNF469Q96JG9 3925 aaPredicted RBP3.06□□□□□ -1.92
C11orf54-203ENST00000526335 A8MUU9 505 aa3.06□□□□□ -1.92
C11orf54-203ENST00000526335 ZNF861PO60384 105 aa3.06□□□□□ -1.92
C11orf54-203ENST00000526335 PRB2P02812 416 aaPredicted RBP3.06□□□□□ -1.92
C11orf54-203ENST00000526335 P0C880 135 aa3.06□□□□□ -1.92
C11orf54-203ENST00000526335 KRTAP26-1Q6PEX3 210 aa3.06□□□□□ -1.92
C11orf54-203ENST00000526335 WNK1Q9H4A3 2382 aa3.05□□□□□ -1.92
C11orf54-203ENST00000526335 LINC00483Q53H64 154 aa3.05□□□□□ -1.92
C11orf54-203ENST00000526335 WFDC10BQ8IUB3 73 aa3.05□□□□□ -1.92
C11orf54-203ENST00000526335 TP53AIP1Q9HCN2 124 aa3.04□□□□□ -1.92
C11orf54-203ENST00000526335 HRNRQ86YZ3 2850 aaPredicted RBP3.04□□□□□ -1.92
C11orf54-203ENST00000526335 MGAM2Q2M2H8 2515 aa3.03□□□□□ -1.92
C11orf54-203ENST00000526335 TGP01266 2768 aa3.03□□□□□ -1.92
C11orf54-203ENST00000526335 SPART-AS1P0CW21 52 aa3.03□□□□□ -1.92
C11orf54-203ENST00000526335 IGFL1Q6UW32 110 aa3.03□□□□□ -1.92
C11orf54-203ENST00000526335 DMAC1Q96GE9 116 aa3.03□□□□□ -1.92
C11orf54-203ENST00000526335 SORL1Q92673 2214 aa3.03□□□□□ -1.92
C11orf54-203ENST00000526335 H3BNG1 76 aa3.02□□□□□ -1.93
C11orf54-203ENST00000526335 PANO1I0J062 215 aa3.02□□□□□ -1.93
C11orf54-203ENST00000526335 SPINK7P58062 85 aa3.02□□□□□ -1.93
C11orf54-203ENST00000526335 DEFB116Q30KQ4 102 aa3.02□□□□□ -1.93
C11orf54-203ENST00000526335 DEFB131BA0A096LNP1 70 aa3.01□□□□□ -1.93
C11orf54-203ENST00000526335 NBEAL2Q6ZNJ1 2754 aa3.01□□□□□ -1.93
C11orf54-203ENST00000526335 MMP24-AS1A0A0U1RRL7 71 aa3□□□□□ -1.93
C11orf54-203ENST00000526335 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
C11orf54-203ENST00000526335 PP632Q6XCG6 107 aa3□□□□□ -1.93
C11orf54-203ENST00000526335 LINC00472Q9H8W2 130 aa3□□□□□ -1.93
C11orf54-203ENST00000526335 NUPR2A6NF83 97 aa3□□□□□ -1.93
C11orf54-203ENST00000526335 RPL37AP61513 92 aaKnown RBP3□□□□□ -1.93
C11orf54-203ENST00000526335 ANK3Q12955 4377 aaKnown RBP2.99□□□□□ -1.93
C11orf54-203ENST00000526335 IGLV7-43P04211 117 aa2.99□□□□□ -1.93
C11orf54-203ENST00000526335 HRES1P13985 223 aa2.99□□□□□ -1.93
C11orf54-203ENST00000526335 HTN3P15516 51 aa2.99□□□□□ -1.93
C11orf54-203ENST00000526335 SPRR1BP22528 89 aa2.99□□□□□ -1.93
C11orf54-203ENST00000526335 IGKV2-24A0A0C4DH68 120 aa2.98□□□□□ -1.93
C11orf54-203ENST00000526335 UQCR11O14957 56 aa2.98□□□□□ -1.93
C11orf54-203ENST00000526335 DEFB135Q30KP9 77 aa2.98□□□□□ -1.93
C11orf54-203ENST00000526335 PCOTHQ58A44 107 aa2.98□□□□□ -1.93
C11orf54-203ENST00000526335 LINC01556Q5JQF7 62 aa2.98□□□□□ -1.93
C11orf54-203ENST00000526335 MEGF8Q7Z7M0 2845 aa2.97□□□□□ -1.93
C11orf54-203ENST00000526335 SVEP1Q4LDE5 3571 aa2.97□□□□□ -1.93
C11orf54-203ENST00000526335 DEFB4AO15263 64 aa2.97□□□□□ -1.93
C11orf54-203ENST00000526335 SPATA8Q6RVD6 105 aa2.97□□□□□ -1.93
C11orf54-203ENST00000526335 CUBNO60494 3623 aa2.95□□□□□ -1.94
C11orf54-203ENST00000526335 ZANQ9Y493 2812 aa2.95□□□□□ -1.94
C11orf54-203ENST00000526335 VPS13CQ709C8 3753 aa2.95□□□□□ -1.94
C11orf54-203ENST00000526335 ACYP2P14621 99 aa2.95□□□□□ -1.94
C11orf54-203ENST00000526335 A0A0G2JQZ4 141 aa2.94□□□□□ -1.94
C11orf54-203ENST00000526335 A0A1W2PNN7 141 aa2.94□□□□□ -1.94
C11orf54-203ENST00000526335 Q5W150 140 aa2.94□□□□□ -1.94
C11orf54-203ENST00000526335 ANAPC11Q9NYG5 84 aa2.94□□□□□ -1.94
C11orf54-203ENST00000526335 ALMS1Q8TCU4 4167 aa2.93□□□□□ -1.94
C11orf54-203ENST00000526335 A0A1B0GU33 70 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms