RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 CCDC88BA6NC98 1476 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 SMARCA2P51531 1590 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 CDC42BPGQ6DT37 1551 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 INO80Q9ULG1 1556 aaPredicted RBP-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 IQCF6A8MYZ5 107 aa-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 LINC00587B1AMM8 73 aa-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 TNP1P09430 55 aa-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 MRPS10P82664 201 aaKnown RBP-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 MT1MQ8N339 61 aa-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 TMEM203Q969S6 136 aa-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 C2orf88Q9BSF0 95 aa-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 NCOA2Q15596 1464 aa-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 MAST1Q9Y2H9 1570 aa-0.88□□□□□ -2.55
CSDE1-210ENST00000525878 UQCRHLA0A096LP55 91 aa-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 MT2AP02795 61 aa-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 HMGN2P05204 90 aaKnown RBP-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 IFI6P09912 130 aa-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 PLGLAQ15195 96 aa-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 GTF2H5Q6ZYL4 71 aa-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 PLIN4Q96Q06 1357 aa-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 DMDP11532 3685 aa-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 WDFY3Q8IZQ1 3526 aa-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 KIF14Q15058 1648 aa-0.89□□□□□ -2.55
CSDE1-210ENST00000525878 IGLV5-48A0A075B6I7 105 aa-0.9□□□□□ -2.55
CSDE1-210ENST00000525878 MMP24-AS1A0A0U1RRL7 71 aa-0.9□□□□□ -2.55
CSDE1-210ENST00000525878 EFCAB10A6NFE3 127 aa-0.9□□□□□ -2.55
CSDE1-210ENST00000525878 WFDC9Q8NEX5 89 aa-0.9□□□□□ -2.55
CSDE1-210ENST00000525878 GNG8Q9UK08 70 aa-0.9□□□□□ -2.55
CSDE1-210ENST00000525878 URB2Q14146 1524 aaKnown RBP-0.9□□□□□ -2.55
CSDE1-210ENST00000525878 FRYLO94915 3013 aa-0.91□□□□□ -2.55
CSDE1-210ENST00000525878 FAUP35544 74 aaKnown RBP-0.91□□□□□ -2.56
CSDE1-210ENST00000525878 SPEGQ15772 3267 aa-0.91□□□□□ -2.56
CSDE1-210ENST00000525878 PEG3Q9GZU2 1588 aa-0.91□□□□□ -2.56
CSDE1-210ENST00000525878 C20orf202A1L168 122 aa-0.92□□□□□ -2.56
CSDE1-210ENST00000525878 MT1BP07438 61 aa-0.92□□□□□ -2.56
CSDE1-210ENST00000525878 COL5A1-AS1Q5SY13 56 aa-0.92□□□□□ -2.56
CSDE1-210ENST00000525878 C3P01024 1663 aa-0.92□□□□□ -2.56
CSDE1-210ENST00000525878 MYMXA0A1B0GTQ4 84 aa-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 CYB5AP00167 134 aa-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 ACYP1P07311 99 aa-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 RPS27P42677 84 aaKnown RBP-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 S100A10P60903 97 aa-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 WT1-ASQ06250 92 aa-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 RPS27LQ71UM5 84 aaKnown RBP-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 C20orf78Q9BR46 151 aa-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 CEP350Q5VT06 3117 aa-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 CNTLNQ9NXG0 1405 aa-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 PCNTO95613 3336 aa-0.93□□□□□ -2.56
CSDE1-210ENST00000525878 FAM208AQ9UK61 1670 aaKnown RBP-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 TTC37Q6PGP7 1564 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 DEFB131BA0A096LNP1 70 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 NDUFA4O00483 81 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 NDUFB1O75438 58 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 PEA15Q15121 130 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 KRTAP20-1Q3LI63 56 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 C14orf144Q96I85 54 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 DPY30Q9C005 99 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 RABAC1Q9UI14 185 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 MROH1Q8NDA8 1641 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 ABCC3O15438 1527 aa-0.94□□□□□ -2.56
CSDE1-210ENST00000525878 CCNB3Q8WWL7 1395 aa-0.95□□□□□ -2.56
CSDE1-210ENST00000525878 LINC00032P0C843 101 aa-0.95□□□□□ -2.56
CSDE1-210ENST00000525878 RBP2P50120 134 aa-0.95□□□□□ -2.56
CSDE1-210ENST00000525878 ARHGAP35Q9NRY4 1499 aa-0.95□□□□□ -2.56
CSDE1-210ENST00000525878 ASXL1Q8IXJ9 1541 aa-0.95□□□□□ -2.56
CSDE1-210ENST00000525878 DIP2AQ14689 1571 aa-0.96□□□□□ -2.56
CSDE1-210ENST00000525878 SMIM11AP58511 58 aa-0.96□□□□□ -2.56
CSDE1-210ENST00000525878 KDM5DQ9BY66 1539 aa-0.96□□□□□ -2.56
CSDE1-210ENST00000525878 CEBPZOSA8MTT3 80 aa-0.97□□□□□ -2.56
CSDE1-210ENST00000525878 UMAD1C9J7I0 102 aa-0.97□□□□□ -2.56
CSDE1-210ENST00000525878 GYPAP02724 150 aa-0.97□□□□□ -2.56
CSDE1-210ENST00000525878 IFI27P40305 119 aaPredicted RBP-0.97□□□□□ -2.56
CSDE1-210ENST00000525878 NREPQ16612 68 aa-0.97□□□□□ -2.56
CSDE1-210ENST00000525878 NCMAPQ5T1S8 102 aa-0.97□□□□□ -2.56
CSDE1-210ENST00000525878 NCBP2-AS2Q69YL0 99 aa-0.97□□□□□ -2.56
CSDE1-210ENST00000525878 ACBD7Q8N6N7 88 aa-0.97□□□□□ -2.56
CSDE1-210ENST00000525878 KCNQ1DNQ9H478 68 aa-0.97□□□□□ -2.56
CSDE1-210ENST00000525878 CROCC2H7BZ55 1655 aa-0.97□□□□□ -2.57
CSDE1-210ENST00000525878 HFM1A2PYH4 1435 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 VPS8Q8N3P4 1428 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 MED14O60244 1454 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 ERVK-7P63135 1459 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 CD163L1Q9NR16 1453 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 CLASP1Q7Z460 1538 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 SZT2Q5T011 3432 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 DNMBPQ6XZF7 1577 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 HMGA1P17096 107 aaKnown RBP-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 CRIP1P50238 77 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 SARNPP82979 210 aaKnown RBP-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 LINC00643Q86TS7 51 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 MADDQ8WXG6 1647 aa-0.98□□□□□ -2.57
CSDE1-210ENST00000525878 RALGAPBQ86X10 1494 aa-0.99□□□□□ -2.57
CSDE1-210ENST00000525878 KIF21BO75037 1637 aa-0.99□□□□□ -2.57
CSDE1-210ENST00000525878 LINC01546A6NGU7 62 aa-0.99□□□□□ -2.57
CSDE1-210ENST00000525878 ATP6V1G2-DDX39BF2Z307 99 aa-0.99□□□□□ -2.57
CSDE1-210ENST00000525878 SNRPFP62306 86 aaKnown RBP-0.99□□□□□ -2.57
CSDE1-210ENST00000525878 SNHG12Q9BXW3 62 aa-0.99□□□□□ -2.57
CSDE1-210ENST00000525878 NOP10Q9NPE3 64 aaKnown RBP-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms