RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 MUC5BQ9HC84 5762 aaPredicted RBP0.39□□□□□ -2.35
USP47-206ENST00000525367 MMP24-AS1A0A0U1RRL7 71 aa0.39□□□□□ -2.35
USP47-206ENST00000525367 LPAP08519 4548 aa0.39□□□□□ -2.35
USP47-206ENST00000525367 CDC42BPAQ5VT25 1732 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 TOGARAM1Q9Y4F4 1720 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 ACANP16112 2415 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 MYCBP2O75592 4640 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 C9orf92A6NGG3 77 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 M0QZ58 72 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 RPL39P62891 51 aaKnown RBP0.38□□□□□ -2.35
USP47-206ENST00000525367 ARHGAP5-AS1Q96IT6 56 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 TOMM7Q9P0U1 55 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 KMT2AQ03164 3969 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 PKD1L2Q7Z442 2459 aa0.38□□□□□ -2.35
USP47-206ENST00000525367 KIF21BO75037 1637 aa0.37□□□□□ -2.35
USP47-206ENST00000525367 RPL39LQ96EH5 51 aaKnown RBP0.36□□□□□ -2.35
USP47-206ENST00000525367 IQGAP1P46940 1657 aa0.36□□□□□ -2.35
USP47-206ENST00000525367 CLTCL1P53675 1640 aa0.35□□□□□ -2.35
USP47-206ENST00000525367 GPR98Q8WXG9 6306 aa0.35□□□□□ -2.35
USP47-206ENST00000525367 H3BNG1 76 aa0.35□□□□□ -2.35
USP47-206ENST00000525367 TNP1P09430 55 aa0.35□□□□□ -2.35
USP47-206ENST00000525367 SPART-AS1P0CW21 52 aa0.35□□□□□ -2.35
USP47-206ENST00000525367 CLPSL2Q6UWE3 100 aa0.35□□□□□ -2.35
USP47-206ENST00000525367 LEAP2Q969E1 77 aa0.35□□□□□ -2.35
USP47-206ENST00000525367 ALMS1Q8TCU4 4167 aa0.34□□□□□ -2.36
USP47-206ENST00000525367 NBASA2RRP1 2371 aa0.34□□□□□ -2.36
USP47-206ENST00000525367 MROH2BQ7Z745 1585 aa0.33□□□□□ -2.36
USP47-206ENST00000525367 DUOX1Q9NRD9 1551 aa0.33□□□□□ -2.36
USP47-206ENST00000525367 PRCDQ00LT1 54 aa0.33□□□□□ -2.36
USP47-206ENST00000525367 LINC01590Q5TEZ4 76 aa0.33□□□□□ -2.36
USP47-206ENST00000525367 CEP290O15078 2479 aa0.33□□□□□ -2.36
USP47-206ENST00000525367 DEFB110Q30KQ9 67 aa0.32□□□□□ -2.36
USP47-206ENST00000525367 TTTY10Q9BZA0 68 aa0.32□□□□□ -2.36
USP47-206ENST00000525367 ACACAQ13085 2346 aa0.32□□□□□ -2.36
USP47-206ENST00000525367 FLNBO75369 2602 aaKnown RBP0.32□□□□□ -2.36
USP47-206ENST00000525367 GCC2Q8IWJ2 1684 aa0.31□□□□□ -2.36
USP47-206ENST00000525367 PRRC2CQ9Y520 2896 aaKnown RBP0.31□□□□□ -2.36
USP47-206ENST00000525367 K7EIM0 57 aa0.31□□□□□ -2.36
USP47-206ENST00000525367 MTORP42345 2549 aa0.31□□□□□ -2.36
USP47-206ENST00000525367 SRRM2Q9UQ35 2752 aaKnown RBP0.3□□□□□ -2.36
USP47-206ENST00000525367 H3BSH0 61 aa0.3□□□□□ -2.36
USP47-206ENST00000525367 FLNCQ14315 2725 aa0.3□□□□□ -2.36
USP47-206ENST00000525367 FAM186AA6NE01 2351 aa0.3□□□□□ -2.36
USP47-206ENST00000525367 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
USP47-206ENST00000525367 NSD1Q96L73 2696 aaPredicted RBP0.29□□□□□ -2.36
USP47-206ENST00000525367 A0A0C4DFX4 3053 aa0.29□□□□□ -2.36
USP47-206ENST00000525367 DEFB104AQ8WTQ1 72 aa0.29□□□□□ -2.36
USP47-206ENST00000525367 TNRC18O15417 2968 aaPredicted RBP0.29□□□□□ -2.36
USP47-206ENST00000525367 SPG11Q96JI7 2443 aa0.28□□□□□ -2.36
USP47-206ENST00000525367 RIF1Q5UIP0 2472 aaKnown RBP0.28□□□□□ -2.36
USP47-206ENST00000525367 HSPG2P98160 4391 aa0.28□□□□□ -2.36
USP47-206ENST00000525367 TMEM167AQ8TBQ9 72 aa0.28□□□□□ -2.36
USP47-206ENST00000525367 RHPN1-AS1Q9BWJ2 59 aa0.28□□□□□ -2.36
USP47-206ENST00000525367 COL7A1Q02388 2944 aa0.28□□□□□ -2.36
USP47-206ENST00000525367 NF1P21359 2839 aa0.28□□□□□ -2.37
USP47-206ENST00000525367 DCHS2Q6V1P9 2916 aa0.27□□□□□ -2.37
USP47-206ENST00000525367 H3BUX3 64 aa0.27□□□□□ -2.37
USP47-206ENST00000525367 UTP20O75691 2785 aaKnown RBP0.27□□□□□ -2.37
USP47-206ENST00000525367 LRRK2Q5S007 2527 aa0.26□□□□□ -2.37
USP47-206ENST00000525367 EPG5Q9HCE0 2579 aa0.26□□□□□ -2.37
USP47-206ENST00000525367 COL6A5A8TX70 2615 aa0.26□□□□□ -2.37
USP47-206ENST00000525367 FLNAP21333 2647 aaKnown RBP0.25□□□□□ -2.37
USP47-206ENST00000525367 COL12A1Q99715 3063 aa0.25□□□□□ -2.37
USP47-206ENST00000525367 SONP18583 2426 aaKnown RBP0.25□□□□□ -2.37
USP47-206ENST00000525367 SETD2Q9BYW2 2564 aaPredicted RBP0.24□□□□□ -2.37
USP47-206ENST00000525367 SPTBN4Q9H254 2564 aa0.24□□□□□ -2.37
USP47-206ENST00000525367 KMT2DO14686 5537 aa0.24□□□□□ -2.37
USP47-206ENST00000525367 MACF1Q9UPN3 7388 aaKnown RBP0.24□□□□□ -2.37
USP47-206ENST00000525367 DEFB108AA8MXU0 73 aa0.24□□□□□ -2.37
USP47-206ENST00000525367 ZZEF1O43149 2961 aa0.24□□□□□ -2.37
USP47-206ENST00000525367 SPRR2AP35326 72 aa0.24□□□□□ -2.37
USP47-206ENST00000525367 ANKHD1Q8IWZ3 2542 aaKnown RBP0.24□□□□□ -2.37
USP47-206ENST00000525367 FRYQ5TBA9 3013 aa0.24□□□□□ -2.37
USP47-206ENST00000525367 CCDC168Q8NDH2 2452 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 DMXL1Q9Y485 3027 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 HMCN2Q8NDA2 5059 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 NBEAQ8NFP9 2946 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 A0A096LNI7 61 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 MT1AP04731 61 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 HTN1P15515 57 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 RPL39P5Q59GN2 51 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 KRTAP8-1Q8IUC2 63 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 SPRR2GQ9BYE4 73 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 GCN1Q92616 2671 aaKnown RBP0.23□□□□□ -2.37
USP47-206ENST00000525367 HECTD4Q9Y4D8 3996 aa0.23□□□□□ -2.37
USP47-206ENST00000525367 FASNP49327 2511 aaKnown RBP0.23□□□□□ -2.37
USP47-206ENST00000525367 NBEAL2Q6ZNJ1 2754 aa0.22□□□□□ -2.37
USP47-206ENST00000525367 DEFB1P60022 68 aa0.22□□□□□ -2.37
USP47-206ENST00000525367 DEFB136Q30KP8 78 aa0.22□□□□□ -2.37
USP47-206ENST00000525367 ACACBO00763 2458 aa0.22□□□□□ -2.37
USP47-206ENST00000525367 TENM2Q9NT68 2774 aa0.22□□□□□ -2.37
USP47-206ENST00000525367 CHD7Q9P2D1 2997 aa0.21□□□□□ -2.38
USP47-206ENST00000525367 CD52P31358 61 aa0.21□□□□□ -2.38
USP47-206ENST00000525367 MGAM2Q2M2H8 2515 aa0.21□□□□□ -2.38
USP47-206ENST00000525367 CEP250Q9BV73 2442 aa0.21□□□□□ -2.38
USP47-206ENST00000525367 ANKRD11Q6UB99 2663 aaPredicted RBP0.2□□□□□ -2.38
USP47-206ENST00000525367 HTTP42858 3142 aa0.2□□□□□ -2.38
USP47-206ENST00000525367 TACC2O95359 2948 aa0.2□□□□□ -2.38
USP47-206ENST00000525367 DEFB133Q30KQ1 61 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms