RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 SPRR1BP22528 89 aa6.31□□□□□ -1.4
TRAPPC4-204ENST00000524797 COX7BP24311 80 aa6.31□□□□□ -1.4
TRAPPC4-204ENST00000524797 ATP5EP2Q5VTU8 51 aa6.31□□□□□ -1.4
TRAPPC4-204ENST00000524797 PRR15Q8IV56 129 aa6.31□□□□□ -1.4
TRAPPC4-204ENST00000524797 ELOF1P60002 83 aaKnown RBP6.3□□□□□ -1.4
TRAPPC4-204ENST00000524797 C6orf99Q4VX62 202 aa6.3□□□□□ -1.4
TRAPPC4-204ENST00000524797 Q8N377 158 aa6.3□□□□□ -1.4
TRAPPC4-204ENST00000524797 A0A087WVE0 104 aa6.29□□□□□ -1.4
TRAPPC4-204ENST00000524797 KRTAP13-3Q3SY46 172 aa6.29□□□□□ -1.4
TRAPPC4-204ENST00000524797 SMIM11BQ8TCY0 68 aa6.29□□□□□ -1.4
TRAPPC4-204ENST00000524797 CCKP06307 115 aa6.28□□□□□ -1.4
TRAPPC4-204ENST00000524797 TRBV7-6A0A0J9YX20 115 aa6.27□□□□□ -1.41
TRAPPC4-204ENST00000524797 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
TRAPPC4-204ENST00000524797 JMJD7-PLA2G4BH0Y9G9 81 aa6.26□□□□□ -1.41
TRAPPC4-204ENST00000524797 GHRHP01286 108 aa6.26□□□□□ -1.41
TRAPPC4-204ENST00000524797 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC4-204ENST00000524797 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC4-204ENST00000524797 DEFB105AQ8NG35 78 aa6.23□□□□□ -1.41
TRAPPC4-204ENST00000524797 UBL5Q9BZL1 73 aa6.23□□□□□ -1.41
TRAPPC4-204ENST00000524797 TMEM256-PLSCR3K7ERE1 68 aa6.21□□□□□ -1.41
TRAPPC4-204ENST00000524797 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.41
TRAPPC4-204ENST00000524797 C20orf197Q8N268 126 aa6.21□□□□□ -1.41
TRAPPC4-204ENST00000524797 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
TRAPPC4-204ENST00000524797 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
TRAPPC4-204ENST00000524797 IGLV5-48A0A075B6I7 105 aa6.2□□□□□ -1.42
TRAPPC4-204ENST00000524797 LIMD2Q9BT23 127 aa6.2□□□□□ -1.42
TRAPPC4-204ENST00000524797 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
TRAPPC4-204ENST00000524797 MUC2Q02817 5179 aa6.19□□□□□ -1.42
TRAPPC4-204ENST00000524797 H7BZZ5 65 aa6.18□□□□□ -1.42
TRAPPC4-204ENST00000524797 NDUFC1O43677 76 aa6.17□□□□□ -1.42
TRAPPC4-204ENST00000524797 SEC61BP60468 96 aaKnown RBP6.17□□□□□ -1.42
TRAPPC4-204ENST00000524797 XP32Q5T750 250 aa6.17□□□□□ -1.42
TRAPPC4-204ENST00000524797 KLKP1Q107X0 134 aa6.16□□□□□ -1.42
TRAPPC4-204ENST00000524797 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
TRAPPC4-204ENST00000524797 A0A0G2JQZ4 141 aa6.15□□□□□ -1.43
TRAPPC4-204ENST00000524797 LINC00575Q6W349 94 aa6.15□□□□□ -1.43
TRAPPC4-204ENST00000524797 KRTAP4-1Q9BYQ7 146 aa6.15□□□□□ -1.43
TRAPPC4-204ENST00000524797 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
TRAPPC4-204ENST00000524797 RBM3P98179 157 aaKnown RBP6.13□□□□□ -1.43
TRAPPC4-204ENST00000524797 LOC110117498A0A087WWA1 95 aa6.13□□□□□ -1.43
TRAPPC4-204ENST00000524797 H3BS24 57 aa6.12□□□□□ -1.43
TRAPPC4-204ENST00000524797 Q6ZQT0 140 aa6.12□□□□□ -1.43
TRAPPC4-204ENST00000524797 H3BQ85 93 aa6.11□□□□□ -1.43
TRAPPC4-204ENST00000524797 PDE6GP18545 87 aa6.11□□□□□ -1.43
TRAPPC4-204ENST00000524797 CXCL6P80162 114 aa6.11□□□□□ -1.43
TRAPPC4-204ENST00000524797 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
TRAPPC4-204ENST00000524797 F8WEM9 126 aa6.11□□□□□ -1.43
TRAPPC4-204ENST00000524797 Q6ZQY7 126 aa6.11□□□□□ -1.43
TRAPPC4-204ENST00000524797 C9orf92A6NGG3 77 aa6.1□□□□□ -1.43
TRAPPC4-204ENST00000524797 Q6ZVQ6 151 aa6.09□□□□□ -1.43
TRAPPC4-204ENST00000524797 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
TRAPPC4-204ENST00000524797 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC4-204ENST00000524797 IGLV8-61A0A075B6I0 122 aa6.07□□□□□ -1.44
TRAPPC4-204ENST00000524797 NDUFS5O43920 106 aa6.07□□□□□ -1.44
TRAPPC4-204ENST00000524797 TRBV7-4A0A0J9YYF1 115 aa6.05□□□□□ -1.44
TRAPPC4-204ENST00000524797 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
TRAPPC4-204ENST00000524797 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
TRAPPC4-204ENST00000524797 C8orf87E5RJ46 101 aa6.03□□□□□ -1.44
TRAPPC4-204ENST00000524797 NREPQ16612 68 aa6.03□□□□□ -1.44
TRAPPC4-204ENST00000524797 Q1T7F1 81 aa6.02□□□□□ -1.45
TRAPPC4-204ENST00000524797 MPLKIPQ8TAP9 179 aa6.02□□□□□ -1.45
TRAPPC4-204ENST00000524797 TMEM254Q8TBM7 123 aa6.02□□□□□ -1.45
TRAPPC4-204ENST00000524797 BPY2O14599 106 aa6.01□□□□□ -1.45
TRAPPC4-204ENST00000524797 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
TRAPPC4-204ENST00000524797 RPL37P61927 97 aaKnown RBP5.99□□□□□ -1.45
TRAPPC4-204ENST00000524797 KRTAP19-2Q3LHN2 52 aa5.97□□□□□ -1.45
TRAPPC4-204ENST00000524797 LCA10Q71F78 164 aa5.94□□□□□ -1.46
TRAPPC4-204ENST00000524797 OCR1Q9BZK8 76 aa5.94□□□□□ -1.46
TRAPPC4-204ENST00000524797 IGKV4-1P06312 121 aa5.93□□□□□ -1.46
TRAPPC4-204ENST00000524797 MT1HP80294 61 aa5.9□□□□□ -1.46
TRAPPC4-204ENST00000524797 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.46
TRAPPC4-204ENST00000524797 C7orf65Q6ZTY9 151 aa5.9□□□□□ -1.46
TRAPPC4-204ENST00000524797 hDV103S1A0JD37 113 aa5.89□□□□□ -1.47
TRAPPC4-204ENST00000524797 A0A087WSZ3 146 aa5.89□□□□□ -1.47
TRAPPC4-204ENST00000524797 Q75L30 129 aa5.89□□□□□ -1.47
TRAPPC4-204ENST00000524797 Q8N9L7 120 aa5.89□□□□□ -1.47
TRAPPC4-204ENST00000524797 A0A1W2PNM2 257 aa5.88□□□□□ -1.47
TRAPPC4-204ENST00000524797 A8MUN3 132 aa5.87□□□□□ -1.47
TRAPPC4-204ENST00000524797 Q96NJ1 140 aa5.87□□□□□ -1.47
TRAPPC4-204ENST00000524797 A0A1B0GW54 56 aa5.87□□□□□ -1.47
TRAPPC4-204ENST00000524797 A6NN06 94 aa5.87□□□□□ -1.47
TRAPPC4-204ENST00000524797 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
TRAPPC4-204ENST00000524797 COX6B2Q6YFQ2 88 aa5.83□□□□□ -1.48
TRAPPC4-204ENST00000524797 C1orf64Q8NEQ6 169 aa5.83□□□□□ -1.48
TRAPPC4-204ENST00000524797 C20orf166-AS1Q96NR2 134 aa5.83□□□□□ -1.48
TRAPPC4-204ENST00000524797 A8MUU9 505 aa5.82□□□□□ -1.48
TRAPPC4-204ENST00000524797 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
TRAPPC4-204ENST00000524797 DSCR10P59022 87 aa5.82□□□□□ -1.48
TRAPPC4-204ENST00000524797 CYP4F30PQ9H0H9 118 aa5.81□□□□□ -1.48
TRAPPC4-204ENST00000524797 ZCCHC13Q8WW36 166 aaKnown RBP5.8□□□□□ -1.48
TRAPPC4-204ENST00000524797 PSPHP1O15172 72 aa5.8□□□□□ -1.48
TRAPPC4-204ENST00000524797 NDUFB1O75438 58 aa5.8□□□□□ -1.48
TRAPPC4-204ENST00000524797 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC4-204ENST00000524797 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC4-204ENST00000524797 Q5VV11 94 aa5.78□□□□□ -1.48
TRAPPC4-204ENST00000524797 M0R2T5 61 aa5.77□□□□□ -1.49
TRAPPC4-204ENST00000524797 LINC00472Q9H8W2 130 aa5.77□□□□□ -1.49
TRAPPC4-204ENST00000524797 KRTAP16-1A8MUX0 517 aa5.76□□□□□ -1.49
TRAPPC4-204ENST00000524797 LINC00313P59037 77 aa5.76□□□□□ -1.49
TRAPPC4-204ENST00000524797 HCG22E2RYF7 251 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms