RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
CAPN1-202ENST00000524773 FBN3Q75N90 2809 aa7.83□□□□□ -1.16
CAPN1-202ENST00000524773 ASB16-AS1Q495Z4 193 aa7.83□□□□□ -1.16
CAPN1-202ENST00000524773 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
CAPN1-202ENST00000524773 KTN1-AS1Q86SY8 53 aa7.83□□□□□ -1.16
CAPN1-202ENST00000524773 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
CAPN1-202ENST00000524773 DNAH2Q9P225 4427 aa7.83□□□□□ -1.16
CAPN1-202ENST00000524773 Q6ZR54 194 aa7.82□□□□□ -1.16
CAPN1-202ENST00000524773 WWC2-AS2Q96NR7 200 aa7.82□□□□□ -1.16
CAPN1-202ENST00000524773 NBDYA0A0U1RRE5 68 aa7.82□□□□□ -1.16
CAPN1-202ENST00000524773 MEGF8Q7Z7M0 2845 aa7.82□□□□□ -1.16
CAPN1-202ENST00000524773 RBM12B-AS1Q9P1G2 102 aa7.81□□□□□ -1.16
CAPN1-202ENST00000524773 ATP11AUNQ6ZP68 121 aa7.81□□□□□ -1.16
CAPN1-202ENST00000524773 TP53AIP1Q9HCN2 124 aa7.81□□□□□ -1.16
CAPN1-202ENST00000524773 A6NN06 94 aa7.8□□□□□ -1.16
CAPN1-202ENST00000524773 SPACA4Q8TDM5 124 aa7.8□□□□□ -1.16
CAPN1-202ENST00000524773 PRKDCP78527 4128 aaKnown RBP7.8□□□□□ -1.16
CAPN1-202ENST00000524773 NUPR2A6NF83 97 aa7.8□□□□□ -1.16
CAPN1-202ENST00000524773 H3BS24 57 aa7.8□□□□□ -1.16
CAPN1-202ENST00000524773 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
CAPN1-202ENST00000524773 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
CAPN1-202ENST00000524773 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
CAPN1-202ENST00000524773 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
CAPN1-202ENST00000524773 DNHD1Q96M86 4753 aa7.79□□□□□ -1.16
CAPN1-202ENST00000524773 DYNC2H1Q8NCM8 4307 aaKnown RBP7.77□□□□□ -1.17
CAPN1-202ENST00000524773 DNAH6Q9C0G6 4158 aa7.77□□□□□ -1.17
CAPN1-202ENST00000524773 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
CAPN1-202ENST00000524773 PLAC8Q9NZF1 115 aa7.76□□□□□ -1.17
CAPN1-202ENST00000524773 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
CAPN1-202ENST00000524773 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
CAPN1-202ENST00000524773 ZNF706Q9Y5V0 76 aaPredicted RBP7.74□□□□□ -1.17
CAPN1-202ENST00000524773 IGLV5-52A0A0A0MRZ9 124 aa7.73□□□□□ -1.17
CAPN1-202ENST00000524773 PRAC1Q96KF2 57 aa7.72□□□□□ -1.17
CAPN1-202ENST00000524773 A0A087WTM6 91 aa7.71□□□□□ -1.17
CAPN1-202ENST00000524773 RTL8CO15255 209 aa7.71□□□□□ -1.17
CAPN1-202ENST00000524773 ADM2Q7Z4H4 148 aa7.71□□□□□ -1.18
CAPN1-202ENST00000524773 ALMS1Q8TCU4 4167 aa7.7□□□□□ -1.18
CAPN1-202ENST00000524773 ZNF861PO60384 105 aa7.7□□□□□ -1.18
CAPN1-202ENST00000524773 KRTAP21-3Q3LHN1 58 aa7.7□□□□□ -1.18
CAPN1-202ENST00000524773 DNAH11Q96DT5 4516 aa7.67□□□□□ -1.18
CAPN1-202ENST00000524773 KRTAP13-3Q3SY46 172 aa7.66□□□□□ -1.18
CAPN1-202ENST00000524773 C7orf65Q6ZTY9 151 aa7.65□□□□□ -1.18
CAPN1-202ENST00000524773 LINC00313P59037 77 aa7.62□□□□□ -1.19
CAPN1-202ENST00000524773 ACYP2P14621 99 aa7.61□□□□□ -1.19
CAPN1-202ENST00000524773 LRP1BQ9NZR2 4599 aa7.6□□□□□ -1.19
CAPN1-202ENST00000524773 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
CAPN1-202ENST00000524773 IGKV2D-30A0A075B6S6 120 aa7.58□□□□□ -1.2
CAPN1-202ENST00000524773 IGKV2-30P06310 120 aa7.58□□□□□ -1.2
CAPN1-202ENST00000524773 A0A1B0GU69 56 aa7.57□□□□□ -1.2
CAPN1-202ENST00000524773 DNAH5Q8TE73 4624 aa7.56□□□□□ -1.2
CAPN1-202ENST00000524773 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
CAPN1-202ENST00000524773 LY6G6CO95867 125 aa7.54□□□□□ -1.2
CAPN1-202ENST00000524773 SPINK1P00995 79 aa7.54□□□□□ -1.2
CAPN1-202ENST00000524773 KRTAP13-2Q52LG2 175 aa7.51□□□□□ -1.21
CAPN1-202ENST00000524773 C8orf87E5RJ46 101 aa7.5□□□□□ -1.21
CAPN1-202ENST00000524773 KRTAP10-2P60368 255 aa7.5□□□□□ -1.21
CAPN1-202ENST00000524773 C1orf134Q5TEV5 83 aa7.5□□□□□ -1.21
CAPN1-202ENST00000524773 SSBP3-AS1Q7Z2R9 100 aa7.5□□□□□ -1.21
CAPN1-202ENST00000524773 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
CAPN1-202ENST00000524773 FAM229AH3BQW9 127 aa7.48□□□□□ -1.21
CAPN1-202ENST00000524773 VPS13BQ7Z7G8 4022 aa7.47□□□□□ -1.21
CAPN1-202ENST00000524773 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.21
CAPN1-202ENST00000524773 Q8N1X5 172 aa7.46□□□□□ -1.21
CAPN1-202ENST00000524773 HYDINQ4G0P3 5121 aa7.45□□□□□ -1.22
CAPN1-202ENST00000524773 KRTAP16-1A8MUX0 517 aa7.43□□□□□ -1.22
CAPN1-202ENST00000524773 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
CAPN1-202ENST00000524773 UQCR11O14957 56 aa7.4□□□□□ -1.22
CAPN1-202ENST00000524773 PLA2G1BP04054 148 aaKnown RBP7.37□□□□□ -1.23
CAPN1-202ENST00000524773 PKD1P98161 4303 aa7.37□□□□□ -1.23
CAPN1-202ENST00000524773 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
CAPN1-202ENST00000524773 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
CAPN1-202ENST00000524773 FLG2Q5D862 2391 aaPredicted RBP7.36□□□□□ -1.23
CAPN1-202ENST00000524773 LINC01554Q52M75 96 aa7.32□□□□□ -1.24
CAPN1-202ENST00000524773 PKHD1P08F94 4074 aa7.32□□□□□ -1.24
CAPN1-202ENST00000524773 KRTAP1-4P0C5Y4 121 aa7.32□□□□□ -1.24
CAPN1-202ENST00000524773 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
CAPN1-202ENST00000524773 TYMSOSQ8TAI1 123 aa7.27□□□□□ -1.25
CAPN1-202ENST00000524773 Q6ZSA8 131 aa7.24□□□□□ -1.25
CAPN1-202ENST00000524773 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
CAPN1-202ENST00000524773 FAT1Q14517 4588 aa7.22□□□□□ -1.25
CAPN1-202ENST00000524773 H0YAA0 97 aa7.22□□□□□ -1.25
CAPN1-202ENST00000524773 SMR3BP02814 79 aaPredicted RBP7.2□□□□□ -1.26
CAPN1-202ENST00000524773 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
CAPN1-202ENST00000524773 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
CAPN1-202ENST00000524773 SACSQ9NZJ4 4579 aa7.15□□□□□ -1.26
CAPN1-202ENST00000524773 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
CAPN1-202ENST00000524773 RPS29P62273 56 aaKnown RBP7.11□□□□□ -1.27
CAPN1-202ENST00000524773 A0A1B0GU33 70 aa7.09□□□□□ -1.27
CAPN1-202ENST00000524773 A8MUU9 505 aa7.09□□□□□ -1.27
CAPN1-202ENST00000524773 DYNC1H1Q14204 4646 aaKnown RBP7.06□□□□□ -1.28
CAPN1-202ENST00000524773 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
CAPN1-202ENST00000524773 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
CAPN1-202ENST00000524773 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
CAPN1-202ENST00000524773 KMT2CQ8NEZ4 4911 aaKnown RBP7.01□□□□□ -1.29
CAPN1-202ENST00000524773 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
CAPN1-202ENST00000524773 RYR2Q92736 4967 aa6.98□□□□□ -1.29
CAPN1-202ENST00000524773 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
CAPN1-202ENST00000524773 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.29
CAPN1-202ENST00000524773 A0A0D9SG42 100 aa6.96□□□□□ -1.3
CAPN1-202ENST00000524773 HSPG2P98160 4391 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms