RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 DSCR8Q96T75 97 aa1.49□□□□□ -2.17
LINC01339-204ENST00000524094 LCE3DQ9BYE3 92 aa1.49□□□□□ -2.17
LINC01339-204ENST00000524094 RBM12B-AS1Q9P1G2 102 aa1.49□□□□□ -2.17
LINC01339-204ENST00000524094 ZNF706Q9Y5V0 76 aaPredicted RBP1.49□□□□□ -2.17
LINC01339-204ENST00000524094 VPS13DQ5THJ4 4388 aa1.49□□□□□ -2.17
LINC01339-204ENST00000524094 DNAH6Q9C0G6 4158 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 IGKV2-24A0A0C4DH68 120 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 A0A1B0GV72 72 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 C16orf90A8MZG2 172 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 F8WEM9 126 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 MP68P56378 58 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 RBM3P98179 157 aaKnown RBP1.48□□□□□ -2.17
LINC01339-204ENST00000524094 KRTAP13-2Q52LG2 175 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 LINC00575Q6W349 94 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 Q6ZQY7 126 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 LINC00643Q86TS7 51 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 DPH3Q96FX2 82 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 UBL5Q9BZL1 73 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 KCNQ1DNQ9H478 68 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 C14orf132Q9NPU4 83 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 C22orf24Q9Y442 160 aa1.48□□□□□ -2.17
LINC01339-204ENST00000524094 DNAH8Q96JB1 4490 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 DNAH17Q9UFH2 4485 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 A0A1B0GW54 56 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 M0R2N4 97 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 LY6G6CO95867 125 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 MT-ATP8P03928 68 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 CCKP06307 115 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 LUZP6Q538Z0 58 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 C1orf134Q5TEV5 83 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 ATP5EP2Q5VTU8 51 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 Q6ZRX8 168 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 Q8NDZ9 215 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 DNAH11Q96DT5 4516 aa1.47□□□□□ -2.17
LINC01339-204ENST00000524094 LOC110117498A0A087WWA1 95 aa1.46□□□□□ -2.18
LINC01339-204ENST00000524094 A0A096LNI7 61 aa1.46□□□□□ -2.18
LINC01339-204ENST00000524094 FUSP35637 526 aaKnown RBP eCLIP1.46□□□□□ -2.18
LINC01339-204ENST00000524094 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
LINC01339-204ENST00000524094 KRTAP20-1Q3LI63 56 aa1.46□□□□□ -2.18
LINC01339-204ENST00000524094 Q6Q795 121 aa1.46□□□□□ -2.18
LINC01339-204ENST00000524094 C9orf163Q8N9P6 203 aa1.46□□□□□ -2.18
LINC01339-204ENST00000524094 DEFB105AQ8NG35 78 aa1.46□□□□□ -2.18
LINC01339-204ENST00000524094 OBSCN-AS1Q96MR7 158 aa1.46□□□□□ -2.18
LINC01339-204ENST00000524094 IMUPQ9GZP8 106 aa1.46□□□□□ -2.18
LINC01339-204ENST00000524094 A0A087WTM6 91 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 TRBV7-7A0A0K0K1E9 115 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 ATOX1O00244 68 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 RTL8CO15255 209 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 SPRR1AP35321 89 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 RPL37AP61513 92 aaKnown RBP1.45□□□□□ -2.18
LINC01339-204ENST00000524094 HIST1H4AP62805 103 aaKnown RBP1.45□□□□□ -2.18
LINC01339-204ENST00000524094 PMAIP1Q13794 54 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 Q6JHZ5 121 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 SDIM1Q6ZPB5 146 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 Q6ZQT0 140 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 Q6ZRN7 208 aaPredicted RBP1.45□□□□□ -2.18
LINC01339-204ENST00000524094 ST20-AS1Q8NBB2 130 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 HIGD2AQ9BW72 106 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 LINC00846Q9NV44 126 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 HSPG2P98160 4391 aa1.45□□□□□ -2.18
LINC01339-204ENST00000524094 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
LINC01339-204ENST00000524094 IGKV3D-7A0A0C4DH55 119 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 TRBV7-4A0A0J9YYF1 115 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 FAM236AA0A1B0GUQ0 79 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 FAM236BA0A1B0GV22 79 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 A0A1W2PNN7 141 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 BCE1O60756 84 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 HAMPP81172 84 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 NREPQ16612 68 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 C1orf137Q5JT78 98 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 PHF5AQ7RTV0 110 aaKnown RBP1.44□□□□□ -2.18
LINC01339-204ENST00000524094 SPACA4Q8TDM5 124 aa1.44□□□□□ -2.18
LINC01339-204ENST00000524094 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
LINC01339-204ENST00000524094 DYNC1H1Q14204 4646 aaKnown RBP1.44□□□□□ -2.18
LINC01339-204ENST00000524094 PKD1P98161 4303 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 IGLV5-48A0A075B6I7 105 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 LCE6AA0A183 80 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 K7ERS5 55 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 PRLHP81277 87 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 C9orf153Q5TBE3 101 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 SMIM20Q8N5G0 67 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 SMCR5Q8TEV8 140 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 Q9BRP9 147 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 FAT2Q9NYQ8 4349 aa1.43□□□□□ -2.18
LINC01339-204ENST00000524094 LRP1BQ9NZR2 4599 aa1.42□□□□□ -2.18
LINC01339-204ENST00000524094 FAM236DA0A1B0GTK5 79 aa1.42□□□□□ -2.18
LINC01339-204ENST00000524094 FAM236CP0DP71 79 aa1.42□□□□□ -2.18
LINC01339-204ENST00000524094 KRTAP10-10P60014 251 aa1.42□□□□□ -2.18
LINC01339-204ENST00000524094 C3orf22Q8N5N4 141 aa1.42□□□□□ -2.18
LINC01339-204ENST00000524094 PLAC8Q9NZF1 115 aa1.42□□□□□ -2.18
LINC01339-204ENST00000524094 SS18L2Q9UHA2 77 aa1.42□□□□□ -2.18
LINC01339-204ENST00000524094 A0A087WVE0 104 aa1.41□□□□□ -2.18
LINC01339-204ENST00000524094 UQCRQO14949 82 aa1.41□□□□□ -2.18
LINC01339-204ENST00000524094 ERC2-IT1O76042 136 aa1.41□□□□□ -2.18
LINC01339-204ENST00000524094 SPRR1BP22528 89 aa1.41□□□□□ -2.18
LINC01339-204ENST00000524094 ADM2Q7Z4H4 148 aa1.41□□□□□ -2.18
LINC01339-204ENST00000524094 SPRR4Q96PI1 79 aa1.41□□□□□ -2.18
LINC01339-204ENST00000524094 PSORS1C2Q9UIG4 136 aa1.41□□□□□ -2.18
LINC01339-204ENST00000524094 VPS13BQ7Z7G8 4022 aa1.41□□□□□ -2.18
LINC01339-204ENST00000524094 APOBP04114 4563 aaKnown RBP1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms