RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 TMEM258P61165 79 aa2.9□□□□□ -1.95
CTNNA1-239ENST00000523685 MOBPQ13875 183 aa2.9□□□□□ -1.95
CTNNA1-239ENST00000523685 C9orf153Q5TBE3 101 aa2.9□□□□□ -1.95
CTNNA1-239ENST00000523685 TEX49A0A1B0GTD5 131 aa2.89□□□□□ -1.95
CTNNA1-239ENST00000523685 LST1O00453 97 aa2.89□□□□□ -1.95
CTNNA1-239ENST00000523685 TSPEAR-AS2P59090 65 aa2.89□□□□□ -1.95
CTNNA1-239ENST00000523685 HIST1H4AP62805 103 aaKnown RBP2.89□□□□□ -1.95
CTNNA1-239ENST00000523685 TRBV10-3A0A0K0K1G6 114 aa2.88□□□□□ -1.95
CTNNA1-239ENST00000523685 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
CTNNA1-239ENST00000523685 J3QQQ9 107 aa2.88□□□□□ -1.95
CTNNA1-239ENST00000523685 ATOX1O00244 68 aa2.88□□□□□ -1.95
CTNNA1-239ENST00000523685 LEPROTO15243 131 aa2.88□□□□□ -1.95
CTNNA1-239ENST00000523685 COX7CP15954 63 aa2.88□□□□□ -1.95
CTNNA1-239ENST00000523685 LGALS3P17931 250 aaKnown RBP2.88□□□□□ -1.95
CTNNA1-239ENST00000523685 LINC00643Q86TS7 51 aa2.88□□□□□ -1.95
CTNNA1-239ENST00000523685 ERC2-IT1O76042 136 aa2.87□□□□□ -1.95
CTNNA1-239ENST00000523685 COX6CP09669 75 aa2.87□□□□□ -1.95
CTNNA1-239ENST00000523685 LINC00483Q53H64 154 aa2.87□□□□□ -1.95
CTNNA1-239ENST00000523685 PCOTHQ58A44 107 aa2.87□□□□□ -1.95
CTNNA1-239ENST00000523685 SFTA2Q6UW10 78 aa2.87□□□□□ -1.95
CTNNA1-239ENST00000523685 MIR7-3HGQ8N6C7 128 aa2.87□□□□□ -1.95
CTNNA1-239ENST00000523685 KCNQ1DNQ9H478 68 aa2.87□□□□□ -1.95
CTNNA1-239ENST00000523685 A0A0J9YXY3 114 aa2.86□□□□□ -1.95
CTNNA1-239ENST00000523685 C9orf92A6NGG3 77 aa2.86□□□□□ -1.95
CTNNA1-239ENST00000523685 TIMM17BO60830 172 aa2.86□□□□□ -1.95
CTNNA1-239ENST00000523685 SPRR1AP35321 89 aa2.86□□□□□ -1.95
CTNNA1-239ENST00000523685 MT1HP80294 61 aa2.86□□□□□ -1.95
CTNNA1-239ENST00000523685 HRCT1Q6UXD1 115 aa2.86□□□□□ -1.95
CTNNA1-239ENST00000523685 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
CTNNA1-239ENST00000523685 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
CTNNA1-239ENST00000523685 KRTAP4-16G5E9R7 235 aaPredicted RBP2.85□□□□□ -1.95
CTNNA1-239ENST00000523685 M0R2T5 61 aa2.85□□□□□ -1.95
CTNNA1-239ENST00000523685 RPS29P62273 56 aaKnown RBP2.85□□□□□ -1.95
CTNNA1-239ENST00000523685 MUSTN1Q8IVN3 82 aa2.85□□□□□ -1.95
CTNNA1-239ENST00000523685 Q9BRP9 147 aa2.85□□□□□ -1.95
CTNNA1-239ENST00000523685 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
CTNNA1-239ENST00000523685 TRACP01848 142 aa2.84□□□□□ -1.95
CTNNA1-239ENST00000523685 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
CTNNA1-239ENST00000523685 Q5XG85 94 aa2.84□□□□□ -1.95
CTNNA1-239ENST00000523685 Q6JHZ5 121 aa2.84□□□□□ -1.95
CTNNA1-239ENST00000523685 S100A7L2Q5SY68 101 aa2.83□□□□□ -1.96
CTNNA1-239ENST00000523685 ATP5EP2Q5VTU8 51 aa2.83□□□□□ -1.96
CTNNA1-239ENST00000523685 COX6B2Q6YFQ2 88 aa2.83□□□□□ -1.96
CTNNA1-239ENST00000523685 Q6ZRX8 168 aa2.83□□□□□ -1.96
CTNNA1-239ENST00000523685 SERP2Q8N6R1 65 aa2.83□□□□□ -1.96
CTNNA1-239ENST00000523685 ST20-AS1Q8NBB2 130 aa2.83□□□□□ -1.96
CTNNA1-239ENST00000523685 COPS9Q8WXC6 57 aa2.83□□□□□ -1.96
CTNNA1-239ENST00000523685 H7C2G1 150 aa2.82□□□□□ -1.96
CTNNA1-239ENST00000523685 NDUFC2O95298 119 aa2.82□□□□□ -1.96
CTNNA1-239ENST00000523685 NPC2P61916 151 aa2.82□□□□□ -1.96
CTNNA1-239ENST00000523685 CLEC2BQ92478 149 aa2.82□□□□□ -1.96
CTNNA1-239ENST00000523685 TRAV23DV6A0A075B6W5 121 aa2.81□□□□□ -1.96
CTNNA1-239ENST00000523685 hADV29S1A0JD25 119 aa2.81□□□□□ -1.96
CTNNA1-239ENST00000523685 IGLV6-57P01721 117 aa2.81□□□□□ -1.96
CTNNA1-239ENST00000523685 LIMD2Q9BT23 127 aa2.81□□□□□ -1.96
CTNNA1-239ENST00000523685 PRO0628Q9UI54 55 aa2.81□□□□□ -1.96
CTNNA1-239ENST00000523685 ZNF73O43830 326 aaPredicted RBP2.8□□□□□ -1.96
CTNNA1-239ENST00000523685 DNAL4O96015 105 aa2.8□□□□□ -1.96
CTNNA1-239ENST00000523685 OBSCN-AS1Q96MR7 158 aa2.8□□□□□ -1.96
CTNNA1-239ENST00000523685 CYSTM1Q9H1C7 97 aa2.8□□□□□ -1.96
CTNNA1-239ENST00000523685 FAM236DA0A1B0GTK5 79 aa2.79□□□□□ -1.96
CTNNA1-239ENST00000523685 FAM236CP0DP71 79 aa2.79□□□□□ -1.96
CTNNA1-239ENST00000523685 ATP5EP56381 51 aaPredicted RBP2.79□□□□□ -1.96
CTNNA1-239ENST00000523685 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
CTNNA1-239ENST00000523685 DEFB105AQ8NG35 78 aa2.79□□□□□ -1.96
CTNNA1-239ENST00000523685 DSCR8Q96T75 97 aa2.79□□□□□ -1.96
CTNNA1-239ENST00000523685 LAMTOR3Q9UHA4 124 aa2.79□□□□□ -1.96
CTNNA1-239ENST00000523685 SERP1Q9Y6X1 66 aa2.79□□□□□ -1.96
CTNNA1-239ENST00000523685 SOSTDC1Q6X4U4 206 aa2.78□□□□□ -1.96
CTNNA1-239ENST00000523685 A0A0G2JQZ4 141 aa2.77□□□□□ -1.97
CTNNA1-239ENST00000523685 BAALC-AS2P0C853 105 aa2.77□□□□□ -1.97
CTNNA1-239ENST00000523685 C4orf26Q17RF5 130 aa2.77□□□□□ -1.97
CTNNA1-239ENST00000523685 LINC00308Q8TCZ7 52 aa2.77□□□□□ -1.97
CTNNA1-239ENST00000523685 TRAV13-2A0A0B4J235 113 aa2.76□□□□□ -1.97
CTNNA1-239ENST00000523685 SPRR1BP22528 89 aa2.76□□□□□ -1.97
CTNNA1-239ENST00000523685 RPL37P61927 97 aaKnown RBP2.76□□□□□ -1.97
CTNNA1-239ENST00000523685 SMIM26A0A096LP01 95 aa2.75□□□□□ -1.97
CTNNA1-239ENST00000523685 COX7BP24311 80 aa2.75□□□□□ -1.97
CTNNA1-239ENST00000523685 KLKP1Q107X0 134 aa2.75□□□□□ -1.97
CTNNA1-239ENST00000523685 C1orf195Q5TG92 126 aa2.75□□□□□ -1.97
CTNNA1-239ENST00000523685 LINC00846Q9NV44 126 aa2.75□□□□□ -1.97
CTNNA1-239ENST00000523685 FLGP20930 4061 aaPredicted RBP2.74□□□□□ -1.97
CTNNA1-239ENST00000523685 H0YGX0 51 aa2.74□□□□□ -1.97
CTNNA1-239ENST00000523685 H7BZZ5 65 aa2.74□□□□□ -1.97
CTNNA1-239ENST00000523685 NDUFC1O43677 76 aa2.74□□□□□ -1.97
CTNNA1-239ENST00000523685 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
CTNNA1-239ENST00000523685 CD164Q04900 197 aa2.74□□□□□ -1.97
CTNNA1-239ENST00000523685 C6orf99Q4VX62 202 aa2.74□□□□□ -1.97
CTNNA1-239ENST00000523685 TRAV7A0A075B6U4 112 aa2.73□□□□□ -1.97
CTNNA1-239ENST00000523685 A0A087WVE0 104 aa2.73□□□□□ -1.97
CTNNA1-239ENST00000523685 IGKV3D-7A0A0C4DH55 119 aa2.73□□□□□ -1.97
CTNNA1-239ENST00000523685 CCKP06307 115 aa2.73□□□□□ -1.97
CTNNA1-239ENST00000523685 ELOF1P60002 83 aaKnown RBP2.73□□□□□ -1.97
CTNNA1-239ENST00000523685 C14orf132Q9NPU4 83 aa2.73□□□□□ -1.97
CTNNA1-239ENST00000523685 JMJD7-PLA2G4BH0Y9G9 81 aa2.72□□□□□ -1.97
CTNNA1-239ENST00000523685 C20orf197Q8N268 126 aa2.72□□□□□ -1.97
CTNNA1-239ENST00000523685 V9GYY9 64 aa2.72□□□□□ -1.97
CTNNA1-239ENST00000523685 ATP11AUNQ6ZP68 121 aa2.71□□□□□ -1.98
CTNNA1-239ENST00000523685 ORMDL1Q9P0S3 153 aa2.71□□□□□ -1.98
CTNNA1-239ENST00000523685 USH2AO75445 5202 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms