RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SLC25A20O43772 301 aa3.68□□□□□ -1.82
SDCBP-210ENST00000522843 COX7BP24311 80 aa3.68□□□□□ -1.82
SDCBP-210ENST00000522843 OCIAD2Q56VL3 154 aa3.68□□□□□ -1.82
SDCBP-210ENST00000522843 ANKRD29Q8N6D5 301 aa3.68□□□□□ -1.82
SDCBP-210ENST00000522843 C9JAW5 83 aa3.67□□□□□ -1.82
SDCBP-210ENST00000522843 TMEM256-PLSCR3K7ERE1 68 aa3.67□□□□□ -1.82
SDCBP-210ENST00000522843 BAALC-AS2P0C853 105 aa3.67□□□□□ -1.82
SDCBP-210ENST00000522843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-210ENST00000522843 Q6ZRX8 168 aa3.67□□□□□ -1.82
SDCBP-210ENST00000522843 PPDPFLQ8WWR9 84 aa3.67□□□□□ -1.82
SDCBP-210ENST00000522843 OBSCN-AS1Q96MR7 158 aa3.67□□□□□ -1.82
SDCBP-210ENST00000522843 DHRS4-AS1Q9P1J3 65 aa3.67□□□□□ -1.82
SDCBP-210ENST00000522843 RPL37AP8A6NKH3 93 aa3.66□□□□□ -1.82
SDCBP-210ENST00000522843 TEN1Q86WV5 123 aa3.66□□□□□ -1.82
SDCBP-210ENST00000522843 FP248Q71RG6 208 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-210ENST00000522843 KRTAP13-1Q8IUC0 172 aa3.65□□□□□ -1.83
SDCBP-210ENST00000522843 ORMDL1Q9P0S3 153 aa3.65□□□□□ -1.83
SDCBP-210ENST00000522843 NEBP20929 6669 aa3.65□□□□□ -1.83
SDCBP-210ENST00000522843 IGLV5-48A0A075B6I7 105 aa3.64□□□□□ -1.83
SDCBP-210ENST00000522843 ETDCA0A1B0GVM5 59 aa3.64□□□□□ -1.83
SDCBP-210ENST00000522843 BCE1O60756 84 aa3.64□□□□□ -1.83
SDCBP-210ENST00000522843 DNAL4O96015 105 aa3.64□□□□□ -1.83
SDCBP-210ENST00000522843 DSCR10P59022 87 aa3.64□□□□□ -1.83
SDCBP-210ENST00000522843 ETDBQ3ZM63 59 aa3.64□□□□□ -1.83
SDCBP-210ENST00000522843 FAM229BQ4G0N7 80 aa3.64□□□□□ -1.83
SDCBP-210ENST00000522843 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
SDCBP-210ENST00000522843 Q9BRP9 147 aa3.64□□□□□ -1.83
SDCBP-210ENST00000522843 JMJD7-PLA2G4BH0Y9G9 81 aa3.63□□□□□ -1.83
SDCBP-210ENST00000522843 SPRR1BP22528 89 aa3.63□□□□□ -1.83
SDCBP-210ENST00000522843 C3orf22Q8N5N4 141 aa3.63□□□□□ -1.83
SDCBP-210ENST00000522843 SMCR5Q8TEV8 140 aa3.63□□□□□ -1.83
SDCBP-210ENST00000522843 Q6ZQY7 126 aa3.62□□□□□ -1.83
SDCBP-210ENST00000522843 Q8N377 158 aa3.62□□□□□ -1.83
SDCBP-210ENST00000522843 J3QR89 54 aa3.61□□□□□ -1.83
SDCBP-210ENST00000522843 K7ERU9 68 aa3.61□□□□□ -1.83
SDCBP-210ENST00000522843 PDE6GP18545 87 aa3.61□□□□□ -1.83
SDCBP-210ENST00000522843 SEC61GP60059 68 aa3.61□□□□□ -1.83
SDCBP-210ENST00000522843 TEX49A0A1B0GTD5 131 aa3.6□□□□□ -1.83
SDCBP-210ENST00000522843 M0R2T5 61 aa3.6□□□□□ -1.83
SDCBP-210ENST00000522843 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
SDCBP-210ENST00000522843 FAM19A1Q7Z5A9 133 aa3.6□□□□□ -1.83
SDCBP-210ENST00000522843 IGLV8-61A0A075B6I0 122 aa3.59□□□□□ -1.83
SDCBP-210ENST00000522843 LOC110117498A0A087WWA1 95 aa3.59□□□□□ -1.83
SDCBP-210ENST00000522843 FAM240AA0A1B0GVK7 77 aa3.59□□□□□ -1.83
SDCBP-210ENST00000522843 A0A1B0GW54 56 aa3.59□□□□□ -1.83
SDCBP-210ENST00000522843 ACYP1P07311 99 aa3.59□□□□□ -1.83
SDCBP-210ENST00000522843 RBM3P98179 157 aaKnown RBP3.59□□□□□ -1.83
SDCBP-210ENST00000522843 LINC00483Q53H64 154 aa3.59□□□□□ -1.83
SDCBP-210ENST00000522843 TRBV7-4A0A0J9YYF1 115 aa3.58□□□□□ -1.84
SDCBP-210ENST00000522843 CCKP06307 115 aa3.58□□□□□ -1.84
SDCBP-210ENST00000522843 PCOTHQ58A44 107 aa3.58□□□□□ -1.84
SDCBP-210ENST00000522843 UBE2AP49459 152 aa3.57□□□□□ -1.84
SDCBP-210ENST00000522843 PRLHP81277 87 aa3.57□□□□□ -1.84
SDCBP-210ENST00000522843 SPAG11AQ6PDA7 123 aa3.57□□□□□ -1.84
SDCBP-210ENST00000522843 ST20-AS1Q8NBB2 130 aa3.57□□□□□ -1.84
SDCBP-210ENST00000522843 Q6ZQT0 140 aa3.56□□□□□ -1.84
SDCBP-210ENST00000522843 SPRR4Q96PI1 79 aa3.56□□□□□ -1.84
SDCBP-210ENST00000522843 HIGD2AQ9BW72 106 aa3.56□□□□□ -1.84
SDCBP-210ENST00000522843 LAMTOR3Q9UHA4 124 aa3.56□□□□□ -1.84
SDCBP-210ENST00000522843 ZNF706Q9Y5V0 76 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-210ENST00000522843 KRTAP12-2P59991 146 aa3.55□□□□□ -1.84
SDCBP-210ENST00000522843 DSCR8Q96T75 97 aa3.55□□□□□ -1.84
SDCBP-210ENST00000522843 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
SDCBP-210ENST00000522843 Q6JHZ5 121 aa3.54□□□□□ -1.84
SDCBP-210ENST00000522843 Q6Q795 121 aa3.54□□□□□ -1.84
SDCBP-210ENST00000522843 DEFB105AQ8NG35 78 aa3.54□□□□□ -1.84
SDCBP-210ENST00000522843 C14orf132Q9NPU4 83 aa3.54□□□□□ -1.84
SDCBP-210ENST00000522843 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
SDCBP-210ENST00000522843 SSBP3-AS1Q7Z2R9 100 aa3.52□□□□□ -1.85
SDCBP-210ENST00000522843 A0A1W2PNM2 257 aa3.51□□□□□ -1.85
SDCBP-210ENST00000522843 SPINK1P00995 79 aa3.51□□□□□ -1.85
SDCBP-210ENST00000522843 TRBV7-7A0A0K0K1E9 115 aa3.5□□□□□ -1.85
SDCBP-210ENST00000522843 F8WEM9 126 aa3.5□□□□□ -1.85
SDCBP-210ENST00000522843 CD164Q04900 197 aa3.5□□□□□ -1.85
SDCBP-210ENST00000522843 IGFL1Q6UW32 110 aa3.5□□□□□ -1.85
SDCBP-210ENST00000522843 LINC00643Q86TS7 51 aa3.5□□□□□ -1.85
SDCBP-210ENST00000522843 LINC00846Q9NV44 126 aa3.5□□□□□ -1.85
SDCBP-210ENST00000522843 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
SDCBP-210ENST00000522843 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
SDCBP-210ENST00000522843 IMUPQ9GZP8 106 aa3.49□□□□□ -1.85
SDCBP-210ENST00000522843 SIGMAR1Q99720 223 aa3.48□□□□□ -1.85
SDCBP-210ENST00000522843 RPS29P62273 56 aaKnown RBP3.47□□□□□ -1.85
SDCBP-210ENST00000522843 CXCL6P80162 114 aa3.47□□□□□ -1.85
SDCBP-210ENST00000522843 Q5XG85 94 aa3.47□□□□□ -1.85
SDCBP-210ENST00000522843 VPS25Q9BRG1 176 aa3.47□□□□□ -1.85
SDCBP-210ENST00000522843 UBL5Q9BZL1 73 aa3.47□□□□□ -1.85
SDCBP-210ENST00000522843 MT2AP02795 61 aa3.46□□□□□ -1.86
SDCBP-210ENST00000522843 ATP5EP2Q5VTU8 51 aa3.46□□□□□ -1.86
SDCBP-210ENST00000522843 C9orf92A6NGG3 77 aa3.45□□□□□ -1.86
SDCBP-210ENST00000522843 NREPQ16612 68 aa3.45□□□□□ -1.86
SDCBP-210ENST00000522843 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
SDCBP-210ENST00000522843 A0A1B0GV72 72 aa3.44□□□□□ -1.86
SDCBP-210ENST00000522843 MT-ATP8P03928 68 aa3.44□□□□□ -1.86
SDCBP-210ENST00000522843 MT1FP04733 61 aa3.44□□□□□ -1.86
SDCBP-210ENST00000522843 LINC00472Q9H8W2 130 aa3.44□□□□□ -1.86
SDCBP-210ENST00000522843 SCGB1A1P11684 91 aa3.43□□□□□ -1.86
SDCBP-210ENST00000522843 MOBPQ13875 183 aa3.43□□□□□ -1.86
SDCBP-210ENST00000522843 A0A087WSZ3 146 aa3.42□□□□□ -1.86
SDCBP-210ENST00000522843 A0A0G2JQZ4 141 aa3.42□□□□□ -1.86
SDCBP-210ENST00000522843 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms