RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 J3KT08 172 aa9.75□□□□□ -0.85
VEGFA-222ENST00000520948 LCE2DQ5TA82 110 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-222ENST00000520948 NREPQ16612 68 aa9.73□□□□□ -0.85
VEGFA-222ENST00000520948 ETDBQ3ZM63 59 aa9.73□□□□□ -0.85
VEGFA-222ENST00000520948 RPL37P61927 97 aaKnown RBP9.72□□□□□ -0.85
VEGFA-222ENST00000520948 A0A1B0GV90 55 aa9.71□□□□□ -0.86
VEGFA-222ENST00000520948 DSCR10P59022 87 aa9.71□□□□□ -0.86
VEGFA-222ENST00000520948 LINC00313P59037 77 aa9.7□□□□□ -0.86
VEGFA-222ENST00000520948 NOTCH2NLQ7Z3S9 236 aa9.7□□□□□ -0.86
VEGFA-222ENST00000520948 FSIP2Q5CZC0 6907 aa9.7□□□□□ -0.86
VEGFA-222ENST00000520948 A0A1B0GVX0 72 aa9.69□□□□□ -0.86
VEGFA-222ENST00000520948 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
VEGFA-222ENST00000520948 Q75L30 129 aa9.68□□□□□ -0.86
VEGFA-222ENST00000520948 CRCT1Q9UGL9 99 aa9.68□□□□□ -0.86
VEGFA-222ENST00000520948 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
VEGFA-222ENST00000520948 C20orf166-AS1Q96NR2 134 aa9.67□□□□□ -0.86
VEGFA-222ENST00000520948 IGHV6-1A0A0B4J1U7 121 aa9.66□□□□□ -0.86
VEGFA-222ENST00000520948 A8MUU9 505 aa9.66□□□□□ -0.86
VEGFA-222ENST00000520948 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
VEGFA-222ENST00000520948 A8MWP4 228 aa9.65□□□□□ -0.86
VEGFA-222ENST00000520948 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
VEGFA-222ENST00000520948 Q6ZVQ6 151 aa9.64□□□□□ -0.87
VEGFA-222ENST00000520948 LINC00846Q9NV44 126 aa9.64□□□□□ -0.87
VEGFA-222ENST00000520948 IGKV3D-7A0A0C4DH55 119 aa9.63□□□□□ -0.87
VEGFA-222ENST00000520948 NDUFB1O75438 58 aa9.63□□□□□ -0.87
VEGFA-222ENST00000520948 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
VEGFA-222ENST00000520948 PRR15Q8IV56 129 aa9.6□□□□□ -0.87
VEGFA-222ENST00000520948 MT1HP80294 61 aa9.58□□□□□ -0.88
VEGFA-222ENST00000520948 BPY2O14599 106 aa9.57□□□□□ -0.88
VEGFA-222ENST00000520948 C8orf17Q9NRJ1 99 aa9.57□□□□□ -0.88
VEGFA-222ENST00000520948 ATP11AUNQ6ZP68 121 aa9.56□□□□□ -0.88
VEGFA-222ENST00000520948 UBL5Q9BZL1 73 aa9.56□□□□□ -0.88
VEGFA-222ENST00000520948 K7EQZ3 153 aa9.54□□□□□ -0.88
VEGFA-222ENST00000520948 MMP24-AS1A0A0U1RRL7 71 aa9.5□□□□□ -0.89
VEGFA-222ENST00000520948 Q8N9P0 234 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-222ENST00000520948 ACYP1P07311 99 aa9.49□□□□□ -0.89
VEGFA-222ENST00000520948 FAM240AA0A1B0GVK7 77 aa9.47□□□□□ -0.89
VEGFA-222ENST00000520948 Q8N9L7 120 aa9.46□□□□□ -0.9
VEGFA-222ENST00000520948 TMEM254Q8TBM7 123 aa9.45□□□□□ -0.9
VEGFA-222ENST00000520948 LORP23490 312 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-222ENST00000520948 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-222ENST00000520948 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
VEGFA-222ENST00000520948 hDV103S1A0JD37 113 aa9.42□□□□□ -0.9
VEGFA-222ENST00000520948 CXCL6P80162 114 aa9.42□□□□□ -0.9
VEGFA-222ENST00000520948 M0R2T5 61 aa9.39□□□□□ -0.91
VEGFA-222ENST00000520948 ZCCHC13Q8WW36 166 aaKnown RBP9.38□□□□□ -0.91
VEGFA-222ENST00000520948 CASC2Q6XLA1 102 aa9.36□□□□□ -0.91
VEGFA-222ENST00000520948 COX6B2Q6YFQ2 88 aa9.35□□□□□ -0.91
VEGFA-222ENST00000520948 WFDC13Q8IUB5 93 aa9.35□□□□□ -0.91
VEGFA-222ENST00000520948 HCG22E2RYF7 251 aa9.32□□□□□ -0.92
VEGFA-222ENST00000520948 ATP5EP2Q5VTU8 51 aa9.3□□□□□ -0.92
VEGFA-222ENST00000520948 FLGP20930 4061 aaPredicted RBP9.29□□□□□ -0.92
VEGFA-222ENST00000520948 LINC00643Q86TS7 51 aa9.28□□□□□ -0.92
VEGFA-222ENST00000520948 J3QR89 54 aa9.27□□□□□ -0.93
VEGFA-222ENST00000520948 NDUFS5O43920 106 aa9.27□□□□□ -0.93
VEGFA-222ENST00000520948 HRES1P13985 223 aa9.24□□□□□ -0.93
VEGFA-222ENST00000520948 Q5W150 140 aa9.24□□□□□ -0.93
VEGFA-222ENST00000520948 SPINK7P58062 85 aa9.23□□□□□ -0.93
VEGFA-222ENST00000520948 MPLKIPQ8TAP9 179 aa9.23□□□□□ -0.93
VEGFA-222ENST00000520948 HIST1H4AP62805 103 aaKnown RBP9.16□□□□□ -0.94
VEGFA-222ENST00000520948 TP53AIP1Q9HCN2 124 aa9.14□□□□□ -0.95
VEGFA-222ENST00000520948 A0A087WVE0 104 aa9.11□□□□□ -0.95
VEGFA-222ENST00000520948 K7ERU9 68 aa9.11□□□□□ -0.95
VEGFA-222ENST00000520948 RBM12B-AS1Q9P1G2 102 aa9.1□□□□□ -0.95
VEGFA-222ENST00000520948 IGKV2D-30A0A075B6S6 120 aa9.06□□□□□ -0.96
VEGFA-222ENST00000520948 IGKV2-30P06310 120 aa9.06□□□□□ -0.96
VEGFA-222ENST00000520948 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
VEGFA-222ENST00000520948 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-222ENST00000520948 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
VEGFA-222ENST00000520948 FAM236DA0A1B0GTK5 79 aa9.02□□□□□ -0.97
VEGFA-222ENST00000520948 FAM236CP0DP71 79 aa9.02□□□□□ -0.97
VEGFA-222ENST00000520948 KRTAP9-8Q9BYQ0 159 aa8.99□□□□□ -0.97
VEGFA-222ENST00000520948 UQCRQO14949 82 aa8.98□□□□□ -0.97
VEGFA-222ENST00000520948 IMUPQ9GZP8 106 aa8.98□□□□□ -0.97
VEGFA-222ENST00000520948 TRAV22A0A0B4J277 110 aa8.97□□□□□ -0.97
VEGFA-222ENST00000520948 MT-ATP8P03928 68 aa8.97□□□□□ -0.97
VEGFA-222ENST00000520948 USH2AO75445 5202 aa8.96□□□□□ -0.98
VEGFA-222ENST00000520948 SSPOA2VEC9 5147 aa8.96□□□□□ -0.98
VEGFA-222ENST00000520948 OCR1Q9BZK8 76 aa8.94□□□□□ -0.98
VEGFA-222ENST00000520948 CYP4F30PQ9H0H9 118 aa8.91□□□□□ -0.98
VEGFA-222ENST00000520948 C4orf26Q17RF5 130 aa8.89□□□□□ -0.99
VEGFA-222ENST00000520948 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
VEGFA-222ENST00000520948 H0Y9P7 68 aa8.88□□□□□ -0.99
VEGFA-222ENST00000520948 ATOX1O00244 68 aa8.87□□□□□ -0.99
VEGFA-222ENST00000520948 H1FX-AS1Q4G0G2 97 aa8.86□□□□□ -0.99
VEGFA-222ENST00000520948 MT2AP02795 61 aa8.85□□□□□ -0.99
VEGFA-222ENST00000520948 KRTAP3-1Q9BYR8 98 aa8.84□□□□□ -0.99
VEGFA-222ENST00000520948 SCGB1A1P11684 91 aa8.82□□□□□ -1
VEGFA-222ENST00000520948 C5orf47Q569G3 176 aa8.82□□□□□ -1
VEGFA-222ENST00000520948 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
VEGFA-222ENST00000520948 FCGBPQ9Y6R7 5405 aaPredicted RBP8.8□□□□□ -1
VEGFA-222ENST00000520948 LCE2BO14633 110 aa8.78□□□□□ -1
VEGFA-222ENST00000520948 MT1FP04733 61 aa8.78□□□□□ -1
VEGFA-222ENST00000520948 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
VEGFA-222ENST00000520948 LINC00208Q96KT6 92 aa8.78□□□□□ -1
VEGFA-222ENST00000520948 MP68P56378 58 aa8.77□□□□□ -1.01
VEGFA-222ENST00000520948 FAM236AA0A1B0GUQ0 79 aa8.76□□□□□ -1.01
VEGFA-222ENST00000520948 FAM236BA0A1B0GV22 79 aa8.76□□□□□ -1.01
VEGFA-222ENST00000520948 H3BPC8 53 aa8.74□□□□□ -1.01
VEGFA-222ENST00000520948 KRTAP10-10P60014 251 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms