RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 H3BPC8 53 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 LINC00313P59037 77 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 SPAG11BQ08648 103 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 DEFB135Q30KP9 77 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 LINC01556Q5JQF7 62 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 LINC00208Q96KT6 92 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 PRR15LQ9BU68 103 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 C6orf48Q9UBA6 75 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 ABCA12Q86UK0 2595 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 TENM2Q9NT68 2774 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 ANK3Q12955 4377 aaKnown RBP1.66□□□□□ -2.14
HMGB1P41-201ENST00000520234 NIPBLQ6KC79 2804 aaeCLIP1.66□□□□□ -2.14
HMGB1P41-201ENST00000520234 IGLV10-54A0A075B6I4 117 aa1.66□□□□□ -2.14
HMGB1P41-201ENST00000520234 SPINK7P58062 85 aa1.66□□□□□ -2.14
HMGB1P41-201ENST00000520234 LINC01554Q52M75 96 aa1.66□□□□□ -2.14
HMGB1P41-201ENST00000520234 SMR3AQ99954 134 aa1.66□□□□□ -2.14
HMGB1P41-201ENST00000520234 F8P00451 2351 aa1.66□□□□□ -2.14
HMGB1P41-201ENST00000520234 GCN1Q92616 2671 aaKnown RBP1.66□□□□□ -2.14
HMGB1P41-201ENST00000520234 ZNF469Q96JG9 3925 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P41-201ENST00000520234 K7EQZ3 153 aa1.65□□□□□ -2.15
HMGB1P41-201ENST00000520234 DEFB4AO15263 64 aa1.65□□□□□ -2.15
HMGB1P41-201ENST00000520234 SPRR1AP35321 89 aa1.65□□□□□ -2.15
HMGB1P41-201ENST00000520234 SPINT4Q6UDR6 99 aa1.65□□□□□ -2.15
HMGB1P41-201ENST00000520234 CLPSL2Q6UWE3 100 aa1.65□□□□□ -2.15
HMGB1P41-201ENST00000520234 CSMD2Q7Z408 3487 aa1.65□□□□□ -2.15
HMGB1P41-201ENST00000520234 FLNAP21333 2647 aaKnown RBP1.65□□□□□ -2.15
HMGB1P41-201ENST00000520234 UNC79Q9P2D8 2635 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 TENM4Q6N022 2769 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 NBEAL2Q6ZNJ1 2754 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 A6NED7 52 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 ADM2Q7Z4H4 148 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 COA5Q86WW8 74 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 LINC00304Q8N9R0 145 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 SPTSSBQ8NFR3 76 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 ITPR2Q14571 2701 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 KMT2BQ9UMN6 2715 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 DNAH1Q9P2D7 4330 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 HIVEP2P31629 2446 aa1.64□□□□□ -2.15
HMGB1P41-201ENST00000520234 DEFB131BA0A096LNP1 70 aa1.63□□□□□ -2.15
HMGB1P41-201ENST00000520234 HTN3P15516 51 aa1.63□□□□□ -2.15
HMGB1P41-201ENST00000520234 WFDC10BQ8IUB3 73 aa1.63□□□□□ -2.15
HMGB1P41-201ENST00000520234 XAGE1AQ9HD64 81 aa1.63□□□□□ -2.15
HMGB1P41-201ENST00000520234 ACANP16112 2415 aa1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 SETD2Q9BYW2 2564 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 CCDC168Q8NDH2 2452 aa1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 MTORP42345 2549 aa1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 HRES1P13985 223 aa1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 MP68P56378 58 aa1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 SPATA8Q6RVD6 105 aa1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 Q6ZRX8 168 aa1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 LINC00472Q9H8W2 130 aa1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 VWFP04275 2813 aa1.62□□□□□ -2.15
HMGB1P41-201ENST00000520234 CUBNO60494 3623 aa1.61□□□□□ -2.15
HMGB1P41-201ENST00000520234 IGKV2-24A0A0C4DH68 120 aa1.61□□□□□ -2.15
HMGB1P41-201ENST00000520234 H0Y9P7 68 aa1.61□□□□□ -2.15
HMGB1P41-201ENST00000520234 SPRR1BP22528 89 aa1.61□□□□□ -2.15
HMGB1P41-201ENST00000520234 C1orf137Q5JT78 98 aa1.61□□□□□ -2.15
HMGB1P41-201ENST00000520234 HIVEP1P15822 2718 aa1.61□□□□□ -2.15
HMGB1P41-201ENST00000520234 HELZ2Q9BYK8 2649 aaKnown RBP1.61□□□□□ -2.15
HMGB1P41-201ENST00000520234 TENM1Q9UKZ4 2725 aa1.6□□□□□ -2.15
HMGB1P41-201ENST00000520234 CASC2Q6XLA1 102 aa1.6□□□□□ -2.15
HMGB1P41-201ENST00000520234 SRRM2Q9UQ35 2752 aaKnown RBP1.59□□□□□ -2.15
HMGB1P41-201ENST00000520234 TEP1Q99973 2627 aaKnown RBP1.59□□□□□ -2.15
HMGB1P41-201ENST00000520234 NSD1Q96L73 2696 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P41-201ENST00000520234 MMP24-AS1A0A0U1RRL7 71 aa1.59□□□□□ -2.15
HMGB1P41-201ENST00000520234 SPAG11AQ6PDA7 123 aa1.59□□□□□ -2.15
HMGB1P41-201ENST00000520234 FASNP49327 2511 aaKnown RBP1.59□□□□□ -2.16
HMGB1P41-201ENST00000520234 PKD1L1Q8TDX9 2849 aa1.58□□□□□ -2.16
HMGB1P41-201ENST00000520234 A8MWP4 228 aa1.58□□□□□ -2.16
HMGB1P41-201ENST00000520234 RPL37AP61513 92 aaKnown RBP1.58□□□□□ -2.16
HMGB1P41-201ENST00000520234 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
HMGB1P41-201ENST00000520234 WFDC13Q8IUB5 93 aa1.58□□□□□ -2.16
HMGB1P41-201ENST00000520234 DEFB105AQ8NG35 78 aa1.58□□□□□ -2.16
HMGB1P41-201ENST00000520234 Q96NJ1 140 aa1.58□□□□□ -2.16
HMGB1P41-201ENST00000520234 APLNQ9ULZ1 77 aa1.58□□□□□ -2.16
HMGB1P41-201ENST00000520234 DNAH3Q8TD57 4116 aa1.57□□□□□ -2.16
HMGB1P41-201ENST00000520234 A0A1W2PNN7 141 aa1.57□□□□□ -2.16
HMGB1P41-201ENST00000520234 K7EIL1 84 aa1.57□□□□□ -2.16
HMGB1P41-201ENST00000520234 IGLV7-43P04211 117 aa1.57□□□□□ -2.16
HMGB1P41-201ENST00000520234 CSAG1Q6PB30 78 aa1.57□□□□□ -2.16
HMGB1P41-201ENST00000520234 KRTAP13-1Q8IUC0 172 aa1.57□□□□□ -2.16
HMGB1P41-201ENST00000520234 ATRQ13535 2644 aa1.57□□□□□ -2.16
HMGB1P41-201ENST00000520234 TENM3Q9P273 2699 aa1.56□□□□□ -2.16
HMGB1P41-201ENST00000520234 TRRAPQ9Y4A5 3859 aa1.56□□□□□ -2.16
HMGB1P41-201ENST00000520234 A0A096LNI7 61 aa1.56□□□□□ -2.16
HMGB1P41-201ENST00000520234 A0A0G2JQZ4 141 aa1.56□□□□□ -2.16
HMGB1P41-201ENST00000520234 P0C880 135 aa1.56□□□□□ -2.16
HMGB1P41-201ENST00000520234 ROMO1P60602 79 aa1.56□□□□□ -2.16
HMGB1P41-201ENST00000520234 DMAC1Q96GE9 116 aa1.56□□□□□ -2.16
HMGB1P41-201ENST00000520234 RETNLBQ9BQ08 111 aa1.56□□□□□ -2.16
HMGB1P41-201ENST00000520234 TP53AIP1Q9HCN2 124 aa1.56□□□□□ -2.16
HMGB1P41-201ENST00000520234 BAHCC1Q9P281 2608 aa1.55□□□□□ -2.16
HMGB1P41-201ENST00000520234 A0A087WSZ3 146 aa1.55□□□□□ -2.16
HMGB1P41-201ENST00000520234 IGHV6-1A0A0B4J1U7 121 aa1.55□□□□□ -2.16
HMGB1P41-201ENST00000520234 Q6ZRN7 208 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P41-201ENST00000520234 HECTD1Q9ULT8 2610 aa1.55□□□□□ -2.16
HMGB1P41-201ENST00000520234 MAST4O15021 2626 aa1.54□□□□□ -2.16
HMGB1P41-201ENST00000520234 FBN1P35555 2871 aaKnown RBP1.54□□□□□ -2.16
HMGB1P41-201ENST00000520234 DNAH8Q96JB1 4490 aa1.54□□□□□ -2.16
HMGB1P41-201ENST00000520234 NBDYA0A0U1RRE5 68 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms