RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 CSAG1Q6PB30 78 aa4.82□□□□□ -1.64
SLIT3-205ENST00000519486 ANAPC11Q9NYG5 84 aa4.82□□□□□ -1.64
SLIT3-205ENST00000519486 ZNF861PO60384 105 aa4.8□□□□□ -1.64
SLIT3-205ENST00000519486 HRES1P13985 223 aa4.8□□□□□ -1.64
SLIT3-205ENST00000519486 ZNF469Q96JG9 3925 aaPredicted RBP4.8□□□□□ -1.64
SLIT3-205ENST00000519486 IGLV8-61A0A075B6I0 122 aa4.8□□□□□ -1.64
SLIT3-205ENST00000519486 ASB16-AS1Q495Z4 193 aa4.8□□□□□ -1.64
SLIT3-205ENST00000519486 SPACA4Q8TDM5 124 aa4.8□□□□□ -1.64
SLIT3-205ENST00000519486 IGLV7-43P04211 117 aa4.79□□□□□ -1.64
SLIT3-205ENST00000519486 TRRAPQ9Y4A5 3859 aa4.79□□□□□ -1.64
SLIT3-205ENST00000519486 ADM2Q7Z4H4 148 aa4.79□□□□□ -1.64
SLIT3-205ENST00000519486 KRTAP10-1P60331 282 aa4.78□□□□□ -1.64
SLIT3-205ENST00000519486 KRTAP4-16G5E9R7 235 aaPredicted RBP4.78□□□□□ -1.64
SLIT3-205ENST00000519486 C8orf17Q9NRJ1 99 aa4.78□□□□□ -1.64
SLIT3-205ENST00000519486 MRPL34Q9BQ48 92 aaKnown RBP4.78□□□□□ -1.64
SLIT3-205ENST00000519486 KRTAP10-2P60368 255 aa4.77□□□□□ -1.65
SLIT3-205ENST00000519486 SPINK1P00995 79 aa4.76□□□□□ -1.65
SLIT3-205ENST00000519486 KRTAP29-1A8MX34 341 aaPredicted RBP4.76□□□□□ -1.65
SLIT3-205ENST00000519486 KRTAP7-1Q8IUC3 87 aa4.76□□□□□ -1.65
SLIT3-205ENST00000519486 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.76□□□□□ -1.65
SLIT3-205ENST00000519486 TENM2Q9NT68 2774 aa4.76□□□□□ -1.65
SLIT3-205ENST00000519486 SSBP3-AS1Q7Z2R9 100 aa4.75□□□□□ -1.65
SLIT3-205ENST00000519486 MMP24-AS1A0A0U1RRL7 71 aa4.73□□□□□ -1.65
SLIT3-205ENST00000519486 PLAC8Q9NZF1 115 aa4.73□□□□□ -1.65
SLIT3-205ENST00000519486 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
SLIT3-205ENST00000519486 FLG2Q5D862 2391 aaPredicted RBP4.72□□□□□ -1.65
SLIT3-205ENST00000519486 A0A1B0GVX0 72 aa4.72□□□□□ -1.65
SLIT3-205ENST00000519486 PANO1I0J062 215 aa4.71□□□□□ -1.66
SLIT3-205ENST00000519486 KRTAP11-1Q8IUC1 163 aa4.7□□□□□ -1.66
SLIT3-205ENST00000519486 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
SLIT3-205ENST00000519486 LINC00472Q9H8W2 130 aa4.7□□□□□ -1.66
SLIT3-205ENST00000519486 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
SLIT3-205ENST00000519486 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
SLIT3-205ENST00000519486 ANK3Q12955 4377 aaKnown RBP4.68□□□□□ -1.66
SLIT3-205ENST00000519486 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
SLIT3-205ENST00000519486 M0R2T5 61 aa4.67□□□□□ -1.66
SLIT3-205ENST00000519486 SPRR1BP22528 89 aa4.67□□□□□ -1.66
SLIT3-205ENST00000519486 TGP01266 2768 aa4.65□□□□□ -1.66
SLIT3-205ENST00000519486 A0A087X002 238 aa4.65□□□□□ -1.66
SLIT3-205ENST00000519486 Q6ZSA8 131 aa4.63□□□□□ -1.67
SLIT3-205ENST00000519486 SRRM2Q9UQ35 2752 aaKnown RBP4.61□□□□□ -1.67
SLIT3-205ENST00000519486 AKAP9Q99996 3911 aa4.61□□□□□ -1.67
SLIT3-205ENST00000519486 Q6ZRN7 208 aaPredicted RBP4.61□□□□□ -1.67
SLIT3-205ENST00000519486 ROMO1P60602 79 aa4.6□□□□□ -1.67
SLIT3-205ENST00000519486 Q96NJ1 140 aa4.59□□□□□ -1.68
SLIT3-205ENST00000519486 DMAC1Q96GE9 116 aa4.58□□□□□ -1.68
SLIT3-205ENST00000519486 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
SLIT3-205ENST00000519486 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
SLIT3-205ENST00000519486 CRIPTQ9P021 101 aa4.55□□□□□ -1.68
SLIT3-205ENST00000519486 LINC00483Q53H64 154 aa4.54□□□□□ -1.68
SLIT3-205ENST00000519486 KRTAP13-1Q8IUC0 172 aa4.53□□□□□ -1.68
SLIT3-205ENST00000519486 C9orf92A6NGG3 77 aa4.53□□□□□ -1.68
SLIT3-205ENST00000519486 Q5W150 140 aa4.52□□□□□ -1.69
SLIT3-205ENST00000519486 A0A1B0GU33 70 aa4.52□□□□□ -1.69
SLIT3-205ENST00000519486 A0A1B0GVY2 172 aa4.51□□□□□ -1.69
SLIT3-205ENST00000519486 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
SLIT3-205ENST00000519486 CSMD3Q7Z407 3707 aa4.48□□□□□ -1.69
SLIT3-205ENST00000519486 COL7A1Q02388 2944 aa4.47□□□□□ -1.69
SLIT3-205ENST00000519486 A8MUU9 505 aa4.45□□□□□ -1.7
SLIT3-205ENST00000519486 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
SLIT3-205ENST00000519486 MEGF8Q7Z7M0 2845 aa4.41□□□□□ -1.7
SLIT3-205ENST00000519486 KRTAP13-2Q52LG2 175 aa4.4□□□□□ -1.7
SLIT3-205ENST00000519486 A0A0D9SG42 100 aa4.39□□□□□ -1.71
SLIT3-205ENST00000519486 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
SLIT3-205ENST00000519486 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
SLIT3-205ENST00000519486 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
SLIT3-205ENST00000519486 C20orf166-AS1Q96NR2 134 aa4.36□□□□□ -1.71
SLIT3-205ENST00000519486 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
SLIT3-205ENST00000519486 HUWE1Q7Z6Z7 4374 aaKnown RBP4.3□□□□□ -1.72
SLIT3-205ENST00000519486 H0YAA0 97 aa4.29□□□□□ -1.72
SLIT3-205ENST00000519486 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
SLIT3-205ENST00000519486 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
SLIT3-205ENST00000519486 P0C880 135 aa4.27□□□□□ -1.73
SLIT3-205ENST00000519486 KRTAP13-3Q3SY46 172 aa4.26□□□□□ -1.73
SLIT3-205ENST00000519486 KRTAP10-8P60410 259 aa4.22□□□□□ -1.73
SLIT3-205ENST00000519486 ANK2Q01484 3957 aa4.21□□□□□ -1.74
SLIT3-205ENST00000519486 DNAH10Q8IVF4 4471 aa4.21□□□□□ -1.74
SLIT3-205ENST00000519486 DNHD1Q96M86 4753 aa4.19□□□□□ -1.74
SLIT3-205ENST00000519486 C10orf95Q9H7T3 257 aa4.19□□□□□ -1.74
SLIT3-205ENST00000519486 DNAH9Q9NYC9 4486 aa4.15□□□□□ -1.74
SLIT3-205ENST00000519486 PLECQ15149 4684 aaKnown RBP4.14□□□□□ -1.75
SLIT3-205ENST00000519486 S4R3F8 94 aa4.12□□□□□ -1.75
SLIT3-205ENST00000519486 KRTAP4-5Q9BYR2 181 aa4.12□□□□□ -1.75
SLIT3-205ENST00000519486 LYSTQ99698 3801 aa4.09□□□□□ -1.76
SLIT3-205ENST00000519486 XP32Q5T750 250 aa4.07□□□□□ -1.76
SLIT3-205ENST00000519486 DNAH1Q9P2D7 4330 aa4.07□□□□□ -1.76
SLIT3-205ENST00000519486 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
SLIT3-205ENST00000519486 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
SLIT3-205ENST00000519486 PLAC4Q8WY50 150 aa4.04□□□□□ -1.76
SLIT3-205ENST00000519486 PRKDCP78527 4128 aaKnown RBP4.03□□□□□ -1.76
SLIT3-205ENST00000519486 DNAH11Q96DT5 4516 aa4.03□□□□□ -1.76
SLIT3-205ENST00000519486 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
SLIT3-205ENST00000519486 KMT2AQ03164 3969 aa4.01□□□□□ -1.77
SLIT3-205ENST00000519486 CMYA5Q8N3K9 4069 aa4□□□□□ -1.77
SLIT3-205ENST00000519486 CAMK2N1Q7Z7J9 78 aa4□□□□□ -1.77
SLIT3-205ENST00000519486 R4GN34 69 aa3.99□□□□□ -1.77
SLIT3-205ENST00000519486 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
SLIT3-205ENST00000519486 DNAH3Q8TD57 4116 aa3.99□□□□□ -1.77
SLIT3-205ENST00000519486 VPS13DQ5THJ4 4388 aa3.98□□□□□ -1.77
SLIT3-205ENST00000519486 KRTAP3-1Q9BYR8 98 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms