RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 SPRR2EP22531 72 aa2.94□□□□□ -1.94
CTNNA1-214ENST00000519116 SPRR2BP35325 72 aa2.94□□□□□ -1.94
CTNNA1-214ENST00000519116 SPRR2AP35326 72 aa2.94□□□□□ -1.94
CTNNA1-214ENST00000519116 NDUFV3P56181 108 aaKnown RBP2.94□□□□□ -1.94
CTNNA1-214ENST00000519116 NDUFA5Q16718 116 aa2.94□□□□□ -1.94
CTNNA1-214ENST00000519116 BVES-AS1Q5T3Y7 98 aa2.94□□□□□ -1.94
CTNNA1-214ENST00000519116 C8orf87E5RJ46 101 aa2.93□□□□□ -1.94
CTNNA1-214ENST00000519116 H1FX-AS1Q4G0G2 97 aa2.93□□□□□ -1.94
CTNNA1-214ENST00000519116 PET117Q6UWS5 81 aa2.93□□□□□ -1.94
CTNNA1-214ENST00000519116 H3BMG7 143 aa2.92□□□□□ -1.94
CTNNA1-214ENST00000519116 SNCGO76070 127 aa2.92□□□□□ -1.94
CTNNA1-214ENST00000519116 KRTAP19-8Q3LI54 63 aa2.91□□□□□ -1.94
CTNNA1-214ENST00000519116 RAB37Q96AX2 223 aa2.91□□□□□ -1.94
CTNNA1-214ENST00000519116 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
CTNNA1-214ENST00000519116 LINC00472Q9H8W2 130 aa2.91□□□□□ -1.94
CTNNA1-214ENST00000519116 TRBV7-4A0A0J9YYF1 115 aa2.9□□□□□ -1.95
CTNNA1-214ENST00000519116 DEFB116Q30KQ4 102 aa2.9□□□□□ -1.95
CTNNA1-214ENST00000519116 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
CTNNA1-214ENST00000519116 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
CTNNA1-214ENST00000519116 FAM236AA0A1B0GUQ0 79 aa2.88□□□□□ -1.95
CTNNA1-214ENST00000519116 FAM236BA0A1B0GV22 79 aa2.88□□□□□ -1.95
CTNNA1-214ENST00000519116 TRIAP1O43715 76 aa2.88□□□□□ -1.95
CTNNA1-214ENST00000519116 LYRM7Q5U5X0 104 aa2.88□□□□□ -1.95
CTNNA1-214ENST00000519116 DSCR8Q96T75 97 aa2.88□□□□□ -1.95
CTNNA1-214ENST00000519116 SPRR2GQ9BYE4 73 aa2.88□□□□□ -1.95
CTNNA1-214ENST00000519116 FABP2P12104 132 aa2.87□□□□□ -1.95
CTNNA1-214ENST00000519116 ANKRD29Q8N6D5 301 aa2.87□□□□□ -1.95
CTNNA1-214ENST00000519116 H0YGX0 51 aa2.86□□□□□ -1.95
CTNNA1-214ENST00000519116 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
CTNNA1-214ENST00000519116 IMUPQ9GZP8 106 aa2.86□□□□□ -1.95
CTNNA1-214ENST00000519116 IGKV2D-30A0A075B6S6 120 aa2.85□□□□□ -1.95
CTNNA1-214ENST00000519116 IGKV3D-7A0A0C4DH55 119 aa2.85□□□□□ -1.95
CTNNA1-214ENST00000519116 TRACP01848 142 aa2.85□□□□□ -1.95
CTNNA1-214ENST00000519116 SPRR2DP22532 72 aa2.85□□□□□ -1.95
CTNNA1-214ENST00000519116 KRTDAPP60985 99 aa2.85□□□□□ -1.95
CTNNA1-214ENST00000519116 ATOH7Q8N100 152 aa2.84□□□□□ -1.95
CTNNA1-214ENST00000519116 A0A1B0GX51 115 aa2.83□□□□□ -1.96
CTNNA1-214ENST00000519116 J3KT08 172 aa2.83□□□□□ -1.96
CTNNA1-214ENST00000519116 CCKP06307 115 aa2.83□□□□□ -1.96
CTNNA1-214ENST00000519116 SNRPEP62304 92 aaKnown RBP2.83□□□□□ -1.96
CTNNA1-214ENST00000519116 NDUFB1O75438 58 aa2.82□□□□□ -1.96
CTNNA1-214ENST00000519116 A0A1B0GV72 72 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 H3BQ85 93 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H2BKO60814 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H2BJP06899 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H2BOP23527 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H2BBP33778 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H2BDP58876 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H2BCP62807 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST2H2BEQ16778 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 C5orf47Q569G3 176 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H2BHQ93079 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H2BNQ99877 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H2BMQ99879 126 aa2.81□□□□□ -1.96
CTNNA1-214ENST00000519116 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
CTNNA1-214ENST00000519116 HIST1H4GQ99525 98 aa2.8□□□□□ -1.96
CTNNA1-214ENST00000519116 C8orf17Q9NRJ1 99 aa2.8□□□□□ -1.96
CTNNA1-214ENST00000519116 Q6ZVQ6 151 aa2.79□□□□□ -1.96
CTNNA1-214ENST00000519116 KLKP1Q107X0 134 aa2.78□□□□□ -1.96
CTNNA1-214ENST00000519116 C2orf91Q6ZV80 131 aa2.78□□□□□ -1.96
CTNNA1-214ENST00000519116 VPS25Q9BRG1 176 aa2.78□□□□□ -1.96
CTNNA1-214ENST00000519116 ORMDL1Q9P0S3 153 aa2.78□□□□□ -1.96
CTNNA1-214ENST00000519116 A0A0B4J2C4 111 aa2.77□□□□□ -1.97
CTNNA1-214ENST00000519116 HSBP1L1C9JCN9 74 aa2.77□□□□□ -1.97
CTNNA1-214ENST00000519116 TMEM256-PLSCR3K7ERE1 68 aa2.77□□□□□ -1.97
CTNNA1-214ENST00000519116 DNAL4O96015 105 aa2.77□□□□□ -1.97
CTNNA1-214ENST00000519116 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
CTNNA1-214ENST00000519116 CSAG1Q6PB30 78 aa2.77□□□□□ -1.97
CTNNA1-214ENST00000519116 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
CTNNA1-214ENST00000519116 COA6Q5JTJ3 125 aaKnown RBP2.76□□□□□ -1.97
CTNNA1-214ENST00000519116 C7orf65Q6ZTY9 151 aa2.76□□□□□ -1.97
CTNNA1-214ENST00000519116 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
CTNNA1-214ENST00000519116 PRR15Q8IV56 129 aa2.75□□□□□ -1.97
CTNNA1-214ENST00000519116 SVIPQ8NHG7 77 aa2.75□□□□□ -1.97
CTNNA1-214ENST00000519116 S4R3F8 94 aa2.75□□□□□ -1.97
CTNNA1-214ENST00000519116 UBE2V1Q13404 147 aa2.74□□□□□ -1.97
CTNNA1-214ENST00000519116 C4orf26Q17RF5 130 aa2.74□□□□□ -1.97
CTNNA1-214ENST00000519116 Q6ZQT0 140 aa2.74□□□□□ -1.97
CTNNA1-214ENST00000519116 TMEM254Q8TBM7 123 aa2.74□□□□□ -1.97
CTNNA1-214ENST00000519116 MRPL34Q9BQ48 92 aaKnown RBP2.74□□□□□ -1.97
CTNNA1-214ENST00000519116 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
CTNNA1-214ENST00000519116 MT3P25713 68 aa2.73□□□□□ -1.97
CTNNA1-214ENST00000519116 RBM3P98179 157 aaKnown RBP2.73□□□□□ -1.97
CTNNA1-214ENST00000519116 NDUFS5O43920 106 aa2.72□□□□□ -1.97
CTNNA1-214ENST00000519116 PRO1854Q9UHT4 67 aa2.72□□□□□ -1.97
CTNNA1-214ENST00000519116 KRTAP12-2P59991 146 aa2.71□□□□□ -1.98
CTNNA1-214ENST00000519116 LCA10Q71F78 164 aa2.71□□□□□ -1.98
CTNNA1-214ENST00000519116 MMP24-AS1A0A0U1RRL7 71 aa2.7□□□□□ -1.98
CTNNA1-214ENST00000519116 C9JAW5 83 aa2.7□□□□□ -1.98
CTNNA1-214ENST00000519116 DLEU1O43261 78 aa2.7□□□□□ -1.98
CTNNA1-214ENST00000519116 COX8AP10176 69 aa2.7□□□□□ -1.98
CTNNA1-214ENST00000519116 MT1XP80297 61 aa2.7□□□□□ -1.98
CTNNA1-214ENST00000519116 hDV103S1A0JD37 113 aa2.69□□□□□ -1.98
CTNNA1-214ENST00000519116 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
CTNNA1-214ENST00000519116 A0A1B0GW54 56 aa2.68□□□□□ -1.98
CTNNA1-214ENST00000519116 K7EQZ3 153 aa2.68□□□□□ -1.98
CTNNA1-214ENST00000519116 COX6CP09669 75 aa2.68□□□□□ -1.98
CTNNA1-214ENST00000519116 Q5W150 140 aa2.68□□□□□ -1.98
CTNNA1-214ENST00000519116 HIGD1BQ9P298 99 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms