RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 GCN1Q92616 2671 aaKnown RBP2.32□□□□□ -2.04
SQLE-203ENST00000518931 DEFB124Q8NES8 71 aa2.32□□□□□ -2.04
SQLE-203ENST00000518931 PTPRZ1P23471 2315 aaPredicted RBP2.31□□□□□ -2.04
SQLE-203ENST00000518931 CEP250Q9BV73 2442 aa2.31□□□□□ -2.04
SQLE-203ENST00000518931 OTOGQ6ZRI0 2925 aa2.31□□□□□ -2.04
SQLE-203ENST00000518931 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
SQLE-203ENST00000518931 TEP1Q99973 2627 aaKnown RBP2.31□□□□□ -2.04
SQLE-203ENST00000518931 Q5VSD8 79 aa2.3□□□□□ -2.04
SQLE-203ENST00000518931 MYO18BQ8IUG5 2567 aa2.29□□□□□ -2.04
SQLE-203ENST00000518931 DOPEY1Q5JWR5 2465 aa2.29□□□□□ -2.04
SQLE-203ENST00000518931 APC2O95996 2303 aa2.29□□□□□ -2.04
SQLE-203ENST00000518931 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
SQLE-203ENST00000518931 HTTP42858 3142 aa2.29□□□□□ -2.04
SQLE-203ENST00000518931 ABCA12Q86UK0 2595 aa2.28□□□□□ -2.04
SQLE-203ENST00000518931 DCHS1Q96JQ0 3298 aa2.28□□□□□ -2.04
SQLE-203ENST00000518931 J3QKU1 62 aa2.28□□□□□ -2.04
SQLE-203ENST00000518931 USP24Q9UPU5 2620 aa2.28□□□□□ -2.04
SQLE-203ENST00000518931 MAP1BP46821 2468 aaKnown RBP2.28□□□□□ -2.04
SQLE-203ENST00000518931 VPS13AQ96RL7 3174 aa2.28□□□□□ -2.04
SQLE-203ENST00000518931 SPTA1P02549 2419 aa2.28□□□□□ -2.04
SQLE-203ENST00000518931 NBEAQ8NFP9 2946 aa2.28□□□□□ -2.05
SQLE-203ENST00000518931 USP34Q70CQ2 3546 aa2.28□□□□□ -2.05
SQLE-203ENST00000518931 FBN3Q75N90 2809 aa2.27□□□□□ -2.05
SQLE-203ENST00000518931 ZFYVE26Q68DK2 2539 aa2.26□□□□□ -2.05
SQLE-203ENST00000518931 WDFY4Q6ZS81 3184 aa2.26□□□□□ -2.05
SQLE-203ENST00000518931 M0QZ58 72 aa2.25□□□□□ -2.05
SQLE-203ENST00000518931 HTN3P15516 51 aa2.25□□□□□ -2.05
SQLE-203ENST00000518931 FAM186AA6NE01 2351 aa2.25□□□□□ -2.05
SQLE-203ENST00000518931 DNAH12Q6ZR08 3092 aa2.25□□□□□ -2.05
SQLE-203ENST00000518931 RIF1Q5UIP0 2472 aaKnown RBP2.25□□□□□ -2.05
SQLE-203ENST00000518931 CELSR2Q9HCU4 2923 aa2.24□□□□□ -2.05
SQLE-203ENST00000518931 C2CD3Q4AC94 2353 aa2.24□□□□□ -2.05
SQLE-203ENST00000518931 FRYLO94915 3013 aa2.24□□□□□ -2.05
SQLE-203ENST00000518931 MYO9AB2RTY4 2548 aa2.24□□□□□ -2.05
SQLE-203ENST00000518931 HELZ2Q9BYK8 2649 aaKnown RBP2.23□□□□□ -2.05
SQLE-203ENST00000518931 VPS13DQ5THJ4 4388 aa2.23□□□□□ -2.05
SQLE-203ENST00000518931 ITPR3Q14573 2671 aa2.23□□□□□ -2.05
SQLE-203ENST00000518931 GVINP1Q7Z2Y8 2422 aa2.23□□□□□ -2.05
SQLE-203ENST00000518931 OTOGLQ3ZCN5 2332 aa2.23□□□□□ -2.05
SQLE-203ENST00000518931 CACNA1HO95180 2353 aa2.22□□□□□ -2.05
SQLE-203ENST00000518931 SPTAN1Q13813 2472 aaKnown RBP2.21□□□□□ -2.06
SQLE-203ENST00000518931 KRTAP21-3Q3LHN1 58 aa2.21□□□□□ -2.06
SQLE-203ENST00000518931 CDH23Q9H251 3354 aa2.21□□□□□ -2.06
SQLE-203ENST00000518931 XIRP2A4UGR9 3374 aa2.2□□□□□ -2.06
SQLE-203ENST00000518931 DEFB4AO15263 64 aa2.2□□□□□ -2.06
SQLE-203ENST00000518931 PIEZO2Q9H5I5 2752 aa2.2□□□□□ -2.06
SQLE-203ENST00000518931 EP300Q09472 2414 aaPredicted RBP2.19□□□□□ -2.06
SQLE-203ENST00000518931 JMJD1CQ15652 2540 aa2.19□□□□□ -2.06
SQLE-203ENST00000518931 KALRNO60229 2985 aa2.19□□□□□ -2.06
SQLE-203ENST00000518931 HECTD1Q9ULT8 2610 aa2.19□□□□□ -2.06
SQLE-203ENST00000518931 ASPMQ8IZT6 3477 aa2.18□□□□□ -2.06
SQLE-203ENST00000518931 DEFB135Q30KP9 77 aa2.18□□□□□ -2.06
SQLE-203ENST00000518931 BOD1L1Q8NFC6 3051 aa2.18□□□□□ -2.06
SQLE-203ENST00000518931 DNAH14Q0VDD8 3507 aa2.17□□□□□ -2.06
SQLE-203ENST00000518931 ROS1P08922 2347 aa2.17□□□□□ -2.06
SQLE-203ENST00000518931 ABCA2Q9BZC7 2435 aa2.16□□□□□ -2.06
SQLE-203ENST00000518931 TRIOO75962 3097 aa2.15□□□□□ -2.06
SQLE-203ENST00000518931 DSPP15924 2871 aaKnown RBP2.15□□□□□ -2.07
SQLE-203ENST00000518931 TEX15Q9BXT5 2789 aa2.15□□□□□ -2.07
SQLE-203ENST00000518931 CSPG4Q6UVK1 2322 aa2.15□□□□□ -2.07
SQLE-203ENST00000518931 SPEGQ15772 3267 aa2.15□□□□□ -2.07
SQLE-203ENST00000518931 CFAP46Q8IYW2 2715 aa2.15□□□□□ -2.07
SQLE-203ENST00000518931 ITPR1Q14643 2758 aa2.15□□□□□ -2.07
SQLE-203ENST00000518931 DMXL1Q9Y485 3027 aa2.15□□□□□ -2.07
SQLE-203ENST00000518931 FBN2P35556 2912 aa2.14□□□□□ -2.07
SQLE-203ENST00000518931 AKAP13Q12802 2813 aa2.14□□□□□ -2.07
SQLE-203ENST00000518931 AKAP9Q99996 3911 aa2.14□□□□□ -2.07
SQLE-203ENST00000518931 FRYQ5TBA9 3013 aa2.14□□□□□ -2.07
SQLE-203ENST00000518931 UBR5O95071 2799 aaPredicted RBP2.14□□□□□ -2.07
SQLE-203ENST00000518931 DNHD1Q96M86 4753 aa2.14□□□□□ -2.07
SQLE-203ENST00000518931 CREBBPQ92793 2442 aa2.13□□□□□ -2.07
SQLE-203ENST00000518931 DMDP11532 3685 aa2.13□□□□□ -2.07
SQLE-203ENST00000518931 SMG1Q96Q15 3661 aaKnown RBP2.13□□□□□ -2.07
SQLE-203ENST00000518931 MAP1AP78559 2803 aaPredicted RBP2.13□□□□□ -2.07
SQLE-203ENST00000518931 NBPF19A0A087WUL8 3843 aa2.12□□□□□ -2.07
SQLE-203ENST00000518931 MYO15AQ9UKN7 3530 aa2.12□□□□□ -2.07
SQLE-203ENST00000518931 POLQO75417 2590 aa2.11□□□□□ -2.07
SQLE-203ENST00000518931 RP1L1Q8IWN7 2480 aaPredicted RBP2.11□□□□□ -2.07
SQLE-203ENST00000518931 SETD2Q9BYW2 2564 aaPredicted RBP2.09□□□□□ -2.07
SQLE-203ENST00000518931 CEP295Q9C0D2 2601 aa2.09□□□□□ -2.07
SQLE-203ENST00000518931 SPG11Q96JI7 2443 aa2.09□□□□□ -2.07
SQLE-203ENST00000518931 RPS29P62273 56 aaKnown RBP2.09□□□□□ -2.07
SQLE-203ENST00000518931 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
SQLE-203ENST00000518931 COL12A1Q99715 3063 aa2.09□□□□□ -2.07
SQLE-203ENST00000518931 LOC400499M0QZD8 3231 aa2.09□□□□□ -2.08
SQLE-203ENST00000518931 PRRC2CQ9Y520 2896 aaKnown RBP2.08□□□□□ -2.08
SQLE-203ENST00000518931 TLN1Q9Y490 2541 aaKnown RBP2.08□□□□□ -2.08
SQLE-203ENST00000518931 TENM4Q6N022 2769 aa2.08□□□□□ -2.08
SQLE-203ENST00000518931 F8P00451 2351 aa2.07□□□□□ -2.08
SQLE-203ENST00000518931 CHD9Q3L8U1 2897 aa2.07□□□□□ -2.08
SQLE-203ENST00000518931 COL6A5A8TX70 2615 aa2.07□□□□□ -2.08
SQLE-203ENST00000518931 VWFP04275 2813 aa2.07□□□□□ -2.08
SQLE-203ENST00000518931 NBASA2RRP1 2371 aa2.07□□□□□ -2.08
SQLE-203ENST00000518931 CELSR1Q9NYQ6 3014 aa2.07□□□□□ -2.08
SQLE-203ENST00000518931 DNAH11Q96DT5 4516 aa2.06□□□□□ -2.08
SQLE-203ENST00000518931 MYCBP2O75592 4640 aa2.06□□□□□ -2.08
SQLE-203ENST00000518931 CRYBG3Q68DQ2 2970 aa2.06□□□□□ -2.08
SQLE-203ENST00000518931 MTORP42345 2549 aa2.06□□□□□ -2.08
SQLE-203ENST00000518931 IGSF10Q6WRI0 2623 aa2.06□□□□□ -2.08
SQLE-203ENST00000518931 LRBAP50851 2863 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms