RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 SPRR1BP22528 89 aa2.85□□□□□ -1.95
CTNNA1-212ENST00000518919 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
CTNNA1-212ENST00000518919 C1orf134Q5TEV5 83 aa2.85□□□□□ -1.95
CTNNA1-212ENST00000518919 IGHV6-1A0A0B4J1U7 121 aa2.84□□□□□ -1.95
CTNNA1-212ENST00000518919 NDUFS5O43920 106 aa2.84□□□□□ -1.95
CTNNA1-212ENST00000518919 LY6G6CO95867 125 aa2.84□□□□□ -1.95
CTNNA1-212ENST00000518919 IGKV4-1P06312 121 aa2.84□□□□□ -1.95
CTNNA1-212ENST00000518919 HAMPP81172 84 aa2.84□□□□□ -1.95
CTNNA1-212ENST00000518919 IGFL1Q6UW32 110 aa2.84□□□□□ -1.95
CTNNA1-212ENST00000518919 SPRR4Q96PI1 79 aa2.84□□□□□ -1.95
CTNNA1-212ENST00000518919 C8orf17Q9NRJ1 99 aa2.84□□□□□ -1.95
CTNNA1-212ENST00000518919 PLAC8Q9NZF1 115 aa2.84□□□□□ -1.95
CTNNA1-212ENST00000518919 PKHD1P08F94 4074 aa2.84□□□□□ -1.96
CTNNA1-212ENST00000518919 SRRM2Q9UQ35 2752 aaKnown RBP2.83□□□□□ -1.96
CTNNA1-212ENST00000518919 F8WEM9 126 aa2.83□□□□□ -1.96
CTNNA1-212ENST00000518919 COX7CP15954 63 aa2.83□□□□□ -1.96
CTNNA1-212ENST00000518919 Q8N9L7 120 aa2.83□□□□□ -1.96
CTNNA1-212ENST00000518919 CYSTM1Q9H1C7 97 aa2.83□□□□□ -1.96
CTNNA1-212ENST00000518919 A0A1B0GW54 56 aa2.82□□□□□ -1.96
CTNNA1-212ENST00000518919 UQCRQO14949 82 aa2.82□□□□□ -1.96
CTNNA1-212ENST00000518919 CRYGAP11844 174 aa2.82□□□□□ -1.96
CTNNA1-212ENST00000518919 NREPQ16612 68 aa2.82□□□□□ -1.96
CTNNA1-212ENST00000518919 C5orf47Q569G3 176 aa2.82□□□□□ -1.96
CTNNA1-212ENST00000518919 SERP2Q8N6R1 65 aa2.82□□□□□ -1.96
CTNNA1-212ENST00000518919 PSORS1C2Q9UIG4 136 aa2.82□□□□□ -1.96
CTNNA1-212ENST00000518919 VPS13BQ7Z7G8 4022 aa2.82□□□□□ -1.96
CTNNA1-212ENST00000518919 FAT1Q14517 4588 aa2.81□□□□□ -1.96
CTNNA1-212ENST00000518919 PKHD1L1Q86WI1 4243 aa2.81□□□□□ -1.96
CTNNA1-212ENST00000518919 LINC00483Q53H64 154 aa2.81□□□□□ -1.96
CTNNA1-212ENST00000518919 C9orf153Q5TBE3 101 aa2.81□□□□□ -1.96
CTNNA1-212ENST00000518919 CIRBP-AS1Q8TBR5 109 aa2.81□□□□□ -1.96
CTNNA1-212ENST00000518919 SS18L2Q9UHA2 77 aa2.81□□□□□ -1.96
CTNNA1-212ENST00000518919 PRO0628Q9UI54 55 aa2.81□□□□□ -1.96
CTNNA1-212ENST00000518919 A0A087WSZ3 146 aa2.8□□□□□ -1.96
CTNNA1-212ENST00000518919 Q5W150 140 aa2.8□□□□□ -1.96
CTNNA1-212ENST00000518919 DPH3Q96FX2 82 aa2.8□□□□□ -1.96
CTNNA1-212ENST00000518919 TRAV7A0A075B6U4 112 aa2.79□□□□□ -1.96
CTNNA1-212ENST00000518919 K7EQZ3 153 aa2.79□□□□□ -1.96
CTNNA1-212ENST00000518919 KRTAP10-1P60331 282 aa2.79□□□□□ -1.96
CTNNA1-212ENST00000518919 CD164Q04900 197 aa2.79□□□□□ -1.96
CTNNA1-212ENST00000518919 Q6ZSA8 131 aa2.79□□□□□ -1.96
CTNNA1-212ENST00000518919 KMT2CQ8NEZ4 4911 aaKnown RBP2.78□□□□□ -1.96
CTNNA1-212ENST00000518919 A0A1B0GVY2 172 aa2.78□□□□□ -1.96
CTNNA1-212ENST00000518919 IGLV7-43P04211 117 aa2.77□□□□□ -1.97
CTNNA1-212ENST00000518919 ZNF706Q9Y5V0 76 aaPredicted RBP2.77□□□□□ -1.97
CTNNA1-212ENST00000518919 KRTAP10-6P60371 365 aaPredicted RBP2.76□□□□□ -1.97
CTNNA1-212ENST00000518919 MOBPQ13875 183 aa2.76□□□□□ -1.97
CTNNA1-212ENST00000518919 C20orf197Q8N268 126 aa2.76□□□□□ -1.97
CTNNA1-212ENST00000518919 SMIM20Q8N5G0 67 aa2.76□□□□□ -1.97
CTNNA1-212ENST00000518919 Q96NJ1 140 aa2.76□□□□□ -1.97
CTNNA1-212ENST00000518919 LINC00472Q9H8W2 130 aa2.76□□□□□ -1.97
CTNNA1-212ENST00000518919 HCG22E2RYF7 251 aa2.75□□□□□ -1.97
CTNNA1-212ENST00000518919 RPL37AP61513 92 aaKnown RBP2.75□□□□□ -1.97
CTNNA1-212ENST00000518919 HSPG2P98160 4391 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 LCE6AA0A183 80 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 A8MWP4 228 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 H7BZZ5 65 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 TMEM258P61165 79 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 KLKP1Q107X0 134 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 PRR15Q8IV56 129 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 SNURFQ9Y675 71 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 RYR3Q15413 4870 aa2.74□□□□□ -1.97
CTNNA1-212ENST00000518919 RYR1P21817 5038 aa2.73□□□□□ -1.97
CTNNA1-212ENST00000518919 MMP24-AS1A0A0U1RRL7 71 aa2.73□□□□□ -1.97
CTNNA1-212ENST00000518919 HRCT1Q6UXD1 115 aa2.73□□□□□ -1.97
CTNNA1-212ENST00000518919 WFDC13Q8IUB5 93 aa2.73□□□□□ -1.97
CTNNA1-212ENST00000518919 TMEM254Q8TBM7 123 aa2.73□□□□□ -1.97
CTNNA1-212ENST00000518919 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
CTNNA1-212ENST00000518919 ZCCHC13Q8WW36 166 aaKnown RBP2.72□□□□□ -1.97
CTNNA1-212ENST00000518919 RBM12B-AS1Q9P1G2 102 aa2.72□□□□□ -1.97
CTNNA1-212ENST00000518919 FAM236DA0A1B0GTK5 79 aa2.71□□□□□ -1.98
CTNNA1-212ENST00000518919 J3KT08 172 aa2.71□□□□□ -1.98
CTNNA1-212ENST00000518919 FAM236CP0DP71 79 aa2.71□□□□□ -1.98
CTNNA1-212ENST00000518919 ASB16-AS1Q495Z4 193 aa2.71□□□□□ -1.98
CTNNA1-212ENST00000518919 FAT3Q8TDW7 4589 aa2.7□□□□□ -1.98
CTNNA1-212ENST00000518919 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
CTNNA1-212ENST00000518919 FAM229BQ4G0N7 80 aa2.7□□□□□ -1.98
CTNNA1-212ENST00000518919 CASC2Q6XLA1 102 aa2.7□□□□□ -1.98
CTNNA1-212ENST00000518919 TNXBP22105 4242 aa2.69□□□□□ -1.98
CTNNA1-212ENST00000518919 SPANXA2-OT1Q8N9U9 137 aa2.69□□□□□ -1.98
CTNNA1-212ENST00000518919 NDUFC1O43677 76 aa2.68□□□□□ -1.98
CTNNA1-212ENST00000518919 KRTAP10-4P60372 401 aaPredicted RBP2.68□□□□□ -1.98
CTNNA1-212ENST00000518919 SSBP3-AS1Q7Z2R9 100 aa2.68□□□□□ -1.98
CTNNA1-212ENST00000518919 hDV103S1A0JD37 113 aa2.67□□□□□ -1.98
CTNNA1-212ENST00000518919 NDUFB1O75438 58 aa2.67□□□□□ -1.98
CTNNA1-212ENST00000518919 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
CTNNA1-212ENST00000518919 RPS28P62857 69 aaKnown RBP2.67□□□□□ -1.98
CTNNA1-212ENST00000518919 H0Y9P7 68 aa2.66□□□□□ -1.98
CTNNA1-212ENST00000518919 Q5XG85 94 aa2.66□□□□□ -1.98
CTNNA1-212ENST00000518919 SPINK6Q6UWN8 80 aa2.66□□□□□ -1.98
CTNNA1-212ENST00000518919 SERP1Q9Y6X1 66 aa2.66□□□□□ -1.98
CTNNA1-212ENST00000518919 LRP1Q07954 4544 aaKnown RBP2.65□□□□□ -1.98
CTNNA1-212ENST00000518919 TRAV22A0A0B4J277 110 aa2.65□□□□□ -1.99
CTNNA1-212ENST00000518919 MP68P56378 58 aa2.65□□□□□ -1.99
CTNNA1-212ENST00000518919 C1orf195Q5TG92 126 aa2.65□□□□□ -1.99
CTNNA1-212ENST00000518919 C8orf87E5RJ46 101 aa2.64□□□□□ -1.99
CTNNA1-212ENST00000518919 H3BPC8 53 aa2.64□□□□□ -1.99
CTNNA1-212ENST00000518919 SMR3BP02814 79 aaPredicted RBP2.64□□□□□ -1.99
CTNNA1-212ENST00000518919 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms