RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 A0A087WSZ3 146 aa4.17□□□□□ -1.74
CTNNA1-203ENST00000517534 DSCR10P59022 87 aa4.17□□□□□ -1.74
CTNNA1-203ENST00000517534 BATFQ16520 125 aa4.17□□□□□ -1.74
CTNNA1-203ENST00000517534 TEN1Q86WV5 123 aa4.17□□□□□ -1.74
CTNNA1-203ENST00000517534 CEND1Q8N111 149 aa4.17□□□□□ -1.74
CTNNA1-203ENST00000517534 FXYD2P54710 66 aa4.16□□□□□ -1.74
CTNNA1-203ENST00000517534 NDUFV3P56181 108 aaKnown RBP4.16□□□□□ -1.74
CTNNA1-203ENST00000517534 M0R143 59 aa4.15□□□□□ -1.75
CTNNA1-203ENST00000517534 HRES1P13985 223 aa4.15□□□□□ -1.75
CTNNA1-203ENST00000517534 FAM218AQ96MZ4 157 aa4.15□□□□□ -1.75
CTNNA1-203ENST00000517534 A0A1W2PNM2 257 aa4.13□□□□□ -1.75
CTNNA1-203ENST00000517534 H0YGX0 51 aa4.13□□□□□ -1.75
CTNNA1-203ENST00000517534 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
CTNNA1-203ENST00000517534 FAM236DA0A1B0GTK5 79 aa4.12□□□□□ -1.75
CTNNA1-203ENST00000517534 H3BMG7 143 aa4.12□□□□□ -1.75
CTNNA1-203ENST00000517534 FAM236CP0DP71 79 aa4.12□□□□□ -1.75
CTNNA1-203ENST00000517534 LINC00313P59037 77 aa4.12□□□□□ -1.75
CTNNA1-203ENST00000517534 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
CTNNA1-203ENST00000517534 K7ERJ3 54 aa4.11□□□□□ -1.75
CTNNA1-203ENST00000517534 RAB37Q96AX2 223 aa4.11□□□□□ -1.75
CTNNA1-203ENST00000517534 SIGMAR1Q99720 223 aa4.11□□□□□ -1.75
CTNNA1-203ENST00000517534 A0A1B0GX51 115 aa4.1□□□□□ -1.75
CTNNA1-203ENST00000517534 COL5A1-AS1Q5SY13 56 aa4.1□□□□□ -1.75
CTNNA1-203ENST00000517534 RBM12B-AS1Q9P1G2 102 aa4.1□□□□□ -1.75
CTNNA1-203ENST00000517534 A0A0B4J2C4 111 aa4.09□□□□□ -1.75
CTNNA1-203ENST00000517534 TAX1BP3O14907 124 aa4.09□□□□□ -1.75
CTNNA1-203ENST00000517534 SNCGO76070 127 aa4.09□□□□□ -1.75
CTNNA1-203ENST00000517534 IGKV4-1P06312 121 aa4.09□□□□□ -1.75
CTNNA1-203ENST00000517534 FABP2P12104 132 aa4.09□□□□□ -1.75
CTNNA1-203ENST00000517534 TRBV7-4A0A0J9YYF1 115 aa4.08□□□□□ -1.76
CTNNA1-203ENST00000517534 NAA38Q9BRA0 125 aaKnown RBP4.08□□□□□ -1.76
CTNNA1-203ENST00000517534 LINC00472Q9H8W2 130 aa4.08□□□□□ -1.76
CTNNA1-203ENST00000517534 PRO1854Q9UHT4 67 aa4.08□□□□□ -1.76
CTNNA1-203ENST00000517534 DEFB116Q30KQ4 102 aa4.07□□□□□ -1.76
CTNNA1-203ENST00000517534 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
CTNNA1-203ENST00000517534 UBE2V1Q13404 147 aa4.06□□□□□ -1.76
CTNNA1-203ENST00000517534 NEBP20929 6669 aa4.06□□□□□ -1.76
CTNNA1-203ENST00000517534 A0A1B0GV90 55 aa4.05□□□□□ -1.76
CTNNA1-203ENST00000517534 ANKRD29Q8N6D5 301 aa4.05□□□□□ -1.76
CTNNA1-203ENST00000517534 IGHV6-1A0A0B4J1U7 121 aa4.04□□□□□ -1.76
CTNNA1-203ENST00000517534 A0A1B0GV72 72 aa4.03□□□□□ -1.76
CTNNA1-203ENST00000517534 PSMB2P49721 201 aa4.03□□□□□ -1.76
CTNNA1-203ENST00000517534 A0A1W2PPM0 123 aa4.02□□□□□ -1.77
CTNNA1-203ENST00000517534 SPINK7P58062 85 aa4.02□□□□□ -1.77
CTNNA1-203ENST00000517534 A0A1B0GVX0 72 aa4.01□□□□□ -1.77
CTNNA1-203ENST00000517534 C8orf87E5RJ46 101 aa4.01□□□□□ -1.77
CTNNA1-203ENST00000517534 CCKP06307 115 aa4.01□□□□□ -1.77
CTNNA1-203ENST00000517534 SCGB1C2P0DMR2 95 aa4.01□□□□□ -1.77
CTNNA1-203ENST00000517534 MTURNQ8N3F0 131 aa4.01□□□□□ -1.77
CTNNA1-203ENST00000517534 ZCCHC13Q8WW36 166 aaKnown RBP4.01□□□□□ -1.77
CTNNA1-203ENST00000517534 LINC00846Q9NV44 126 aa4.01□□□□□ -1.77
CTNNA1-203ENST00000517534 ORMDL1Q9P0S3 153 aa4.01□□□□□ -1.77
CTNNA1-203ENST00000517534 H3BQ85 93 aa4□□□□□ -1.77
CTNNA1-203ENST00000517534 TMEM256-PLSCR3K7ERE1 68 aa4□□□□□ -1.77
CTNNA1-203ENST00000517534 TRACP01848 142 aa4□□□□□ -1.77
CTNNA1-203ENST00000517534 DNAL4O96015 105 aa3.99□□□□□ -1.77
CTNNA1-203ENST00000517534 COX6CP09669 75 aa3.99□□□□□ -1.77
CTNNA1-203ENST00000517534 LYRM7Q5U5X0 104 aa3.99□□□□□ -1.77
CTNNA1-203ENST00000517534 SPCS1Q9Y6A9 102 aa3.99□□□□□ -1.77
CTNNA1-203ENST00000517534 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
CTNNA1-203ENST00000517534 A8MWP4 228 aa3.98□□□□□ -1.77
CTNNA1-203ENST00000517534 K7EP34 96 aa3.98□□□□□ -1.77
CTNNA1-203ENST00000517534 IGKV2-30P06310 120 aa3.98□□□□□ -1.77
CTNNA1-203ENST00000517534 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
CTNNA1-203ENST00000517534 Q8N9P0 234 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-203ENST00000517534 ATXN8Q156A1 80 aa3.96□□□□□ -1.78
CTNNA1-203ENST00000517534 GTF2H5Q6ZYL4 71 aa3.96□□□□□ -1.78
CTNNA1-203ENST00000517534 RBM3P98179 157 aaKnown RBP3.95□□□□□ -1.78
CTNNA1-203ENST00000517534 WFDC13Q8IUB5 93 aa3.95□□□□□ -1.78
CTNNA1-203ENST00000517534 VPS25Q9BRG1 176 aa3.95□□□□□ -1.78
CTNNA1-203ENST00000517534 C9JAW5 83 aa3.94□□□□□ -1.78
CTNNA1-203ENST00000517534 J3KT08 172 aa3.94□□□□□ -1.78
CTNNA1-203ENST00000517534 Q6ZQT0 140 aa3.93□□□□□ -1.78
CTNNA1-203ENST00000517534 DSCR8Q96T75 97 aa3.93□□□□□ -1.78
CTNNA1-203ENST00000517534 C8orf17Q9NRJ1 99 aa3.92□□□□□ -1.78
CTNNA1-203ENST00000517534 PRO0461Q9UI25 63 aa3.92□□□□□ -1.78
CTNNA1-203ENST00000517534 BAALC-AS2P0C853 105 aa3.91□□□□□ -1.78
CTNNA1-203ENST00000517534 IGKV3D-7A0A0C4DH55 119 aa3.9□□□□□ -1.79
CTNNA1-203ENST00000517534 NDUFB1O75438 58 aa3.9□□□□□ -1.79
CTNNA1-203ENST00000517534 F8W1H4 67 aa3.89□□□□□ -1.79
CTNNA1-203ENST00000517534 H3BT86 120 aa3.89□□□□□ -1.79
CTNNA1-203ENST00000517534 H1FX-AS1Q4G0G2 97 aa3.89□□□□□ -1.79
CTNNA1-203ENST00000517534 Q6ZVQ6 151 aa3.88□□□□□ -1.79
CTNNA1-203ENST00000517534 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
CTNNA1-203ENST00000517534 ETDBQ3ZM63 59 aa3.87□□□□□ -1.79
CTNNA1-203ENST00000517534 PRR15Q8IV56 129 aa3.86□□□□□ -1.79
CTNNA1-203ENST00000517534 LOC110117498A0A087WWA1 95 aa3.85□□□□□ -1.79
CTNNA1-203ENST00000517534 A0A1B0GW54 56 aa3.85□□□□□ -1.79
CTNNA1-203ENST00000517534 MMP24-AS1A0A0U1RRL7 71 aa3.84□□□□□ -1.79
CTNNA1-203ENST00000517534 MRPL34Q9BQ48 92 aaKnown RBP3.84□□□□□ -1.79
CTNNA1-203ENST00000517534 KMT2DO14686 5537 aa3.84□□□□□ -1.8
CTNNA1-203ENST00000517534 JMJD7-PLA2G4BH0Y9G9 81 aa3.83□□□□□ -1.8
CTNNA1-203ENST00000517534 TMEM254Q8TBM7 123 aa3.83□□□□□ -1.8
CTNNA1-203ENST00000517534 C14orf132Q9NPU4 83 aa3.82□□□□□ -1.8
CTNNA1-203ENST00000517534 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
CTNNA1-203ENST00000517534 PDE6GP18545 87 aa3.81□□□□□ -1.8
CTNNA1-203ENST00000517534 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
CTNNA1-203ENST00000517534 MT1BP07438 61 aa3.8□□□□□ -1.8
CTNNA1-203ENST00000517534 NREPQ16612 68 aa3.8□□□□□ -1.8
CTNNA1-203ENST00000517534 Q5W150 140 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms