RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 ATXN8Q156A1 80 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 C5orf38Q86SI9 138 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 TOMM6Q96B49 74 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 TMEM141Q96I45 108 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 LOC107984156A0A0G2JMH3 177 aa2.63□□□□□ -1.99
CPNE3-202ENST00000517391 ARL17AQ8IVW1 177 aa2.63□□□□□ -1.99
CPNE3-202ENST00000517391 C11orf86A6NJI1 115 aa2.62□□□□□ -1.99
CPNE3-202ENST00000517391 ZNF815PA8K554 130 aa2.62□□□□□ -1.99
CPNE3-202ENST00000517391 ATOX1O00244 68 aa2.62□□□□□ -1.99
CPNE3-202ENST00000517391 TRACP01848 142 aa2.62□□□□□ -1.99
CPNE3-202ENST00000517391 MT1HL1P0DM35 61 aa2.62□□□□□ -1.99
CPNE3-202ENST00000517391 COX7CP15954 63 aa2.62□□□□□ -1.99
CPNE3-202ENST00000517391 C9orf116Q5BN46 136 aaPredicted RBP2.62□□□□□ -1.99
CPNE3-202ENST00000517391 C9orf153Q5TBE3 101 aa2.62□□□□□ -1.99
CPNE3-202ENST00000517391 LINC00643Q86TS7 51 aa2.62□□□□□ -1.99
CPNE3-202ENST00000517391 TTTY13Q9BZ97 58 aa2.62□□□□□ -1.99
CPNE3-202ENST00000517391 BCE1O60756 84 aa2.61□□□□□ -1.99
CPNE3-202ENST00000517391 COX6CP09669 75 aa2.61□□□□□ -1.99
CPNE3-202ENST00000517391 HIST1H4AP62805 103 aaKnown RBP2.61□□□□□ -1.99
CPNE3-202ENST00000517391 Q8IZM0 81 aa2.61□□□□□ -1.99
CPNE3-202ENST00000517391 DIRC1Q969H9 104 aa2.61□□□□□ -1.99
CPNE3-202ENST00000517391 AMELXQ99217 191 aa2.61□□□□□ -1.99
CPNE3-202ENST00000517391 LRP1Q07954 4544 aaKnown RBP2.61□□□□□ -1.99
CPNE3-202ENST00000517391 IGIPA6NJ69 53 aa2.6□□□□□ -1.99
CPNE3-202ENST00000517391 LGALS3P17931 250 aaKnown RBP2.6□□□□□ -1.99
CPNE3-202ENST00000517391 TSPEAR-AS2P59090 65 aa2.6□□□□□ -1.99
CPNE3-202ENST00000517391 UNQ6190/PRO20217Q6UXQ8 127 aa2.6□□□□□ -1.99
CPNE3-202ENST00000517391 DAND5Q8N907 189 aa2.6□□□□□ -1.99
CPNE3-202ENST00000517391 SCGB3A1Q96QR1 104 aa2.6□□□□□ -1.99
CPNE3-202ENST00000517391 C6orf48Q9UBA6 75 aa2.6□□□□□ -1.99
CPNE3-202ENST00000517391 PSORS1C2Q9UIG4 136 aa2.6□□□□□ -1.99
CPNE3-202ENST00000517391 TEX49A0A1B0GTD5 131 aa2.59□□□□□ -1.99
CPNE3-202ENST00000517391 LST1O00453 97 aa2.59□□□□□ -1.99
CPNE3-202ENST00000517391 LEPROTO15243 131 aa2.59□□□□□ -1.99
CPNE3-202ENST00000517391 C1orf137Q5JT78 98 aa2.59□□□□□ -1.99
CPNE3-202ENST00000517391 C1orf195Q5TG92 126 aa2.59□□□□□ -1.99
CPNE3-202ENST00000517391 C2orf82Q6UX34 121 aa2.59□□□□□ -1.99
CPNE3-202ENST00000517391 FAM236AA0A1B0GUQ0 79 aa2.58□□□□□ -2
CPNE3-202ENST00000517391 FAM236BA0A1B0GV22 79 aa2.58□□□□□ -2
CPNE3-202ENST00000517391 J3QQQ9 107 aa2.58□□□□□ -2
CPNE3-202ENST00000517391 TIMM17BO60830 172 aa2.58□□□□□ -2
CPNE3-202ENST00000517391 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
CPNE3-202ENST00000517391 UBE2BP63146 152 aa2.58□□□□□ -2
CPNE3-202ENST00000517391 SFTA2Q6UW10 78 aa2.58□□□□□ -2
CPNE3-202ENST00000517391 PHF5AQ7RTV0 110 aaKnown RBP2.58□□□□□ -2
CPNE3-202ENST00000517391 TOMM7Q9P0U1 55 aa2.58□□□□□ -2
CPNE3-202ENST00000517391 CDKN2A-AS1Q9UH64 79 aa2.58□□□□□ -2
CPNE3-202ENST00000517391 SERP1Q9Y6X1 66 aa2.58□□□□□ -2
CPNE3-202ENST00000517391 NDUFC1O43677 76 aa2.57□□□□□ -2
CPNE3-202ENST00000517391 Q5XG85 94 aa2.57□□□□□ -2
CPNE3-202ENST00000517391 SERP2Q8N6R1 65 aa2.57□□□□□ -2
CPNE3-202ENST00000517391 C20orf166-AS1Q96NR2 134 aa2.57□□□□□ -2
CPNE3-202ENST00000517391 FAT3Q8TDW7 4589 aa2.56□□□□□ -2
CPNE3-202ENST00000517391 PKHD1L1Q86WI1 4243 aa2.56□□□□□ -2
CPNE3-202ENST00000517391 ZNF73O43830 326 aaPredicted RBP2.56□□□□□ -2
CPNE3-202ENST00000517391 RPL28P46779 137 aaKnown RBP2.56□□□□□ -2
CPNE3-202ENST00000517391 FAM229BQ4G0N7 80 aa2.56□□□□□ -2
CPNE3-202ENST00000517391 COX7B2Q8TF08 81 aa2.56□□□□□ -2
CPNE3-202ENST00000517391 NPC2P61916 151 aa2.55□□□□□ -2
CPNE3-202ENST00000517391 PMAIP1Q13794 54 aa2.55□□□□□ -2
CPNE3-202ENST00000517391 COX17Q14061 63 aa2.55□□□□□ -2
CPNE3-202ENST00000517391 ATP5EP2Q5VTU8 51 aa2.55□□□□□ -2
CPNE3-202ENST00000517391 Q6JHZ5 121 aa2.55□□□□□ -2
CPNE3-202ENST00000517391 MUSTN1Q8IVN3 82 aa2.55□□□□□ -2
CPNE3-202ENST00000517391 XAGE1AQ9HD64 81 aa2.55□□□□□ -2
CPNE3-202ENST00000517391 C22orf24Q9Y442 160 aa2.55□□□□□ -2
CPNE3-202ENST00000517391 TRBV7-6A0A0J9YX20 115 aa2.54□□□□□ -2
CPNE3-202ENST00000517391 TRBV10-3A0A0K0K1G6 114 aa2.54□□□□□ -2
CPNE3-202ENST00000517391 S100A7L2Q5SY68 101 aa2.54□□□□□ -2
CPNE3-202ENST00000517391 HRCT1Q6UXD1 115 aa2.53□□□□□ -2
CPNE3-202ENST00000517391 PRR15Q8IV56 129 aa2.53□□□□□ -2
CPNE3-202ENST00000517391 OBSCN-AS1Q96MR7 158 aa2.53□□□□□ -2
CPNE3-202ENST00000517391 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2
CPNE3-202ENST00000517391 hADV29S1A0JD25 119 aa2.52□□□□□ -2.01
CPNE3-202ENST00000517391 H3BPC8 53 aa2.52□□□□□ -2.01
CPNE3-202ENST00000517391 SMCR5Q8TEV8 140 aa2.52□□□□□ -2.01
CPNE3-202ENST00000517391 TNXBP22105 4242 aa2.52□□□□□ -2.01
CPNE3-202ENST00000517391 FAM236DA0A1B0GTK5 79 aa2.51□□□□□ -2.01
CPNE3-202ENST00000517391 A0A1B0GW54 56 aa2.51□□□□□ -2.01
CPNE3-202ENST00000517391 FAM236CP0DP71 79 aa2.51□□□□□ -2.01
CPNE3-202ENST00000517391 KRTAP13-1Q8IUC0 172 aa2.51□□□□□ -2.01
CPNE3-202ENST00000517391 NDUFA12Q9UI09 145 aa2.51□□□□□ -2.01
CPNE3-202ENST00000517391 LRP2P98164 4655 aa2.5□□□□□ -2.01
CPNE3-202ENST00000517391 TRAV13-2A0A0B4J235 113 aa2.5□□□□□ -2.01
CPNE3-202ENST00000517391 H0YGX0 51 aa2.5□□□□□ -2.01
CPNE3-202ENST00000517391 DNAL4O96015 105 aa2.5□□□□□ -2.01
CPNE3-202ENST00000517391 BAALC-AS2P0C853 105 aa2.5□□□□□ -2.01
CPNE3-202ENST00000517391 KLKP1Q107X0 134 aa2.5□□□□□ -2.01
CPNE3-202ENST00000517391 CLEC2BQ92478 149 aa2.5□□□□□ -2.01
CPNE3-202ENST00000517391 ZNF625Q96I27 306 aaPredicted RBP2.5□□□□□ -2.01
CPNE3-202ENST00000517391 H7C2G1 150 aa2.49□□□□□ -2.01
CPNE3-202ENST00000517391 M0R378 163 aa2.49□□□□□ -2.01
CPNE3-202ENST00000517391 LINC00158P58513 81 aa2.49□□□□□ -2.01
CPNE3-202ENST00000517391 LINC00308Q8TCZ7 52 aa2.49□□□□□ -2.01
CPNE3-202ENST00000517391 UBR4Q5T4S7 5183 aa2.49□□□□□ -2.01
CPNE3-202ENST00000517391 TRAV7A0A075B6U4 112 aa2.48□□□□□ -2.01
CPNE3-202ENST00000517391 JMJD7-PLA2G4BH0Y9G9 81 aa2.48□□□□□ -2.01
CPNE3-202ENST00000517391 ERC2-IT1O76042 136 aa2.48□□□□□ -2.01
CPNE3-202ENST00000517391 PRLHP81277 87 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms