RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 AKAP13Q12802 2813 aa1.06□□□□□ -2.24
RNU4-60P-201ENST00000517239 RPS27P42677 84 aaKnown RBP1.06□□□□□ -2.24
RNU4-60P-201ENST00000517239 RPS27LQ71UM5 84 aaKnown RBP1.06□□□□□ -2.24
RNU4-60P-201ENST00000517239 KRTAP17-1Q9BYP8 105 aa1.06□□□□□ -2.24
RNU4-60P-201ENST00000517239 CEP295Q9C0D2 2601 aa1.06□□□□□ -2.24
RNU4-60P-201ENST00000517239 EP300Q09472 2414 aaPredicted RBP1.06□□□□□ -2.24
RNU4-60P-201ENST00000517239 DNHD1Q96M86 4753 aa1.05□□□□□ -2.24
RNU4-60P-201ENST00000517239 SETD2Q9BYW2 2564 aaPredicted RBP1.05□□□□□ -2.24
RNU4-60P-201ENST00000517239 LAMA1P25391 3075 aa1.04□□□□□ -2.24
RNU4-60P-201ENST00000517239 TFF3Q07654 80 aa1.04□□□□□ -2.24
RNU4-60P-201ENST00000517239 SPINK6Q6UWN8 80 aa1.04□□□□□ -2.24
RNU4-60P-201ENST00000517239 LRBAP50851 2863 aa1.04□□□□□ -2.24
RNU4-60P-201ENST00000517239 MGAQ8IWI9 3026 aa1.04□□□□□ -2.24
RNU4-60P-201ENST00000517239 KNL1Q8NG31 2342 aa1.04□□□□□ -2.24
RNU4-60P-201ENST00000517239 NBEAL1Q6ZS30 2694 aa1.03□□□□□ -2.24
RNU4-60P-201ENST00000517239 PKDREJQ9NTG1 2253 aa1.03□□□□□ -2.24
RNU4-60P-201ENST00000517239 LRRK2Q5S007 2527 aa1.03□□□□□ -2.24
RNU4-60P-201ENST00000517239 NF1P21359 2839 aa1.03□□□□□ -2.24
RNU4-60P-201ENST00000517239 ATRQ13535 2644 aa1.02□□□□□ -2.25
RNU4-60P-201ENST00000517239 ATMQ13315 3056 aa1.02□□□□□ -2.25
RNU4-60P-201ENST00000517239 DMXL2Q8TDJ6 3036 aa1.02□□□□□ -2.25
RNU4-60P-201ENST00000517239 PCNX1Q96RV3 2341 aa1.02□□□□□ -2.25
RNU4-60P-201ENST00000517239 STAB1Q9NY15 2570 aa1.02□□□□□ -2.25
RNU4-60P-201ENST00000517239 NBEAL2Q6ZNJ1 2754 aa1.02□□□□□ -2.25
RNU4-60P-201ENST00000517239 FLNAP21333 2647 aaKnown RBP1.02□□□□□ -2.25
RNU4-60P-201ENST00000517239 PCLOQ9Y6V0 5065 aa1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 MTORP42345 2549 aa1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 CCDC168Q8NDH2 2452 aa1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 CREBBPQ92793 2442 aa1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 TGP01266 2768 aa1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 CENPEQ02224 2701 aa1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 ADGRG4Q8IZF6 3080 aa1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 NBPF19A0A087WUL8 3843 aa1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 SPENQ96T58 3664 aaKnown RBP1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 NOTCH1P46531 2555 aa1.01□□□□□ -2.25
RNU4-60P-201ENST00000517239 SPTA1P02549 2419 aa1□□□□□ -2.25
RNU4-60P-201ENST00000517239 WT1-ASQ06250 92 aa1□□□□□ -2.25
RNU4-60P-201ENST00000517239 TLN2Q9Y4G6 2542 aa1□□□□□ -2.25
RNU4-60P-201ENST00000517239 PKD1L1Q8TDX9 2849 aa0.99□□□□□ -2.25
RNU4-60P-201ENST00000517239 WNK2Q9Y3S1 2297 aa0.99□□□□□ -2.25
RNU4-60P-201ENST00000517239 ITPR2Q14571 2701 aa0.99□□□□□ -2.25
RNU4-60P-201ENST00000517239 UBR4Q5T4S7 5183 aa0.99□□□□□ -2.25
RNU4-60P-201ENST00000517239 FLNCQ14315 2725 aa0.99□□□□□ -2.25
RNU4-60P-201ENST00000517239 DCHS2Q6V1P9 2916 aa0.98□□□□□ -2.25
RNU4-60P-201ENST00000517239 USP9YO00507 2555 aaPredicted RBP0.98□□□□□ -2.25
RNU4-60P-201ENST00000517239 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.98□□□□□ -2.25
RNU4-60P-201ENST00000517239 DEFB106AQ8N104 65 aa0.98□□□□□ -2.25
RNU4-60P-201ENST00000517239 SMIM2Q9BVW6 85 aa0.98□□□□□ -2.25
RNU4-60P-201ENST00000517239 ANKHD1Q8IWZ3 2542 aaKnown RBP0.98□□□□□ -2.25
RNU4-60P-201ENST00000517239 LAMA5O15230 3695 aa0.98□□□□□ -2.25
RNU4-60P-201ENST00000517239 TENM1Q9UKZ4 2725 aa0.98□□□□□ -2.25
RNU4-60P-201ENST00000517239 SPINK1P00995 79 aa0.97□□□□□ -2.25
RNU4-60P-201ENST00000517239 WFDC10BQ8IUB3 73 aa0.97□□□□□ -2.25
RNU4-60P-201ENST00000517239 S4R3F8 94 aa0.97□□□□□ -2.25
RNU4-60P-201ENST00000517239 COL6A5A8TX70 2615 aa0.97□□□□□ -2.25
RNU4-60P-201ENST00000517239 DUOX1Q9NRD9 1551 aa0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 HYDINQ4G0P3 5121 aa0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 HIVEP3Q5T1R4 2406 aa0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 VWFP04275 2813 aa0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 KRTAP19-3Q7Z4W3 81 aa0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 RYR3Q15413 4870 aa0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 EPPK1P58107 5090 aaKnown RBP0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 CUBNO60494 3623 aa0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 RYR1P21817 5038 aa0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 CSMD1Q96PZ7 3565 aa0.96□□□□□ -2.26
RNU4-60P-201ENST00000517239 OTOGQ6ZRI0 2925 aa0.95□□□□□ -2.26
RNU4-60P-201ENST00000517239 AKAP6Q13023 2319 aa0.95□□□□□ -2.26
RNU4-60P-201ENST00000517239 NBASA2RRP1 2371 aa0.95□□□□□ -2.26
RNU4-60P-201ENST00000517239 H3BUA1 57 aa0.95□□□□□ -2.26
RNU4-60P-201ENST00000517239 PRLHP81277 87 aa0.95□□□□□ -2.26
RNU4-60P-201ENST00000517239 KRTAP5-4Q6L8H1 288 aa0.95□□□□□ -2.26
RNU4-60P-201ENST00000517239 KAAG1Q9UBP8 84 aa0.95□□□□□ -2.26
RNU4-60P-201ENST00000517239 CSMD2Q7Z408 3487 aa0.95□□□□□ -2.26
RNU4-60P-201ENST00000517239 NIPBLQ6KC79 2804 aaeCLIP0.94□□□□□ -2.26
RNU4-60P-201ENST00000517239 ACACAQ13085 2346 aa0.94□□□□□ -2.26
RNU4-60P-201ENST00000517239 SMR3AQ99954 134 aa0.94□□□□□ -2.26
RNU4-60P-201ENST00000517239 MGAM2Q2M2H8 2515 aa0.94□□□□□ -2.26
RNU4-60P-201ENST00000517239 AKAP9Q99996 3911 aa0.94□□□□□ -2.26
RNU4-60P-201ENST00000517239 APC2O95996 2303 aa0.93□□□□□ -2.26
RNU4-60P-201ENST00000517239 HIVEP1P15822 2718 aa0.93□□□□□ -2.26
RNU4-60P-201ENST00000517239 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
RNU4-60P-201ENST00000517239 DEFB135Q30KP9 77 aa0.93□□□□□ -2.26
RNU4-60P-201ENST00000517239 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
RNU4-60P-201ENST00000517239 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
RNU4-60P-201ENST00000517239 APCP25054 2843 aa0.93□□□□□ -2.26
RNU4-60P-201ENST00000517239 PRRC2CQ9Y520 2896 aaKnown RBP0.92□□□□□ -2.26
RNU4-60P-201ENST00000517239 KMT2CQ8NEZ4 4911 aaKnown RBP0.92□□□□□ -2.26
RNU4-60P-201ENST00000517239 BIRC6Q9NR09 4857 aa0.92□□□□□ -2.26
RNU4-60P-201ENST00000517239 ACANP16112 2415 aa0.91□□□□□ -2.26
RNU4-60P-201ENST00000517239 FRAS1Q86XX4 4008 aa0.91□□□□□ -2.26
RNU4-60P-201ENST00000517239 CSMD3Q7Z407 3707 aa0.91□□□□□ -2.26
RNU4-60P-201ENST00000517239 H0YGG7 62 aa0.91□□□□□ -2.26
RNU4-60P-201ENST00000517239 NDUFA1O15239 70 aa0.91□□□□□ -2.26
RNU4-60P-201ENST00000517239 KRTAP5-7Q6L8G8 165 aa0.91□□□□□ -2.26
RNU4-60P-201ENST00000517239 TENM2Q9NT68 2774 aa0.91□□□□□ -2.26
RNU4-60P-201ENST00000517239 ANK2Q01484 3957 aa0.9□□□□□ -2.27
RNU4-60P-201ENST00000517239 KIAA1109Q2LD37 5005 aa0.9□□□□□ -2.27
RNU4-60P-201ENST00000517239 U3KQA8 63 aa0.9□□□□□ -2.27
RNU4-60P-201ENST00000517239 CSPG4Q6UVK1 2322 aa0.9□□□□□ -2.27
RNU4-60P-201ENST00000517239 MAP1AP78559 2803 aaPredicted RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms