RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 COPZ1P61923 177 aa-5.18□□□□□ -3.24
SNORA40.16-201ENST00000517238 TRIQKQ629K1 86 aa-5.18□□□□□ -3.24
SNORA40.16-201ENST00000517238 ATP6V1G3Q96LB4 118 aa-5.18□□□□□ -3.24
SNORA40.16-201ENST00000517238 NRAPQ86VF7 1730 aa-5.19□□□□□ -3.24
SNORA40.16-201ENST00000517238 UACAQ9BZF9 1416 aa-5.19□□□□□ -3.24
SNORA40.16-201ENST00000517238 OOSP1A8MZH6 123 aa-5.19□□□□□ -3.24
SNORA40.16-201ENST00000517238 KRTDAPP60985 99 aa-5.19□□□□□ -3.24
SNORA40.16-201ENST00000517238 SKA2Q8WVK7 121 aaPredicted RBP-5.19□□□□□ -3.24
SNORA40.16-201ENST00000517238 SPANXCQ9NY87 97 aa-5.19□□□□□ -3.24
SNORA40.16-201ENST00000517238 RAPGEF2Q9Y4G8 1499 aa-5.2□□□□□ -3.24
SNORA40.16-201ENST00000517238 RICTORQ6R327 1708 aa-5.2□□□□□ -3.24
SNORA40.16-201ENST00000517238 VPS13AQ96RL7 3174 aa-5.2□□□□□ -3.24
SNORA40.16-201ENST00000517238 DIP2BQ9P265 1576 aa-5.2□□□□□ -3.24
SNORA40.16-201ENST00000517238 PLGLAQ15195 96 aa-5.2□□□□□ -3.24
SNORA40.16-201ENST00000517238 MPC2O95563 127 aa-5.22□□□□□ -3.25
SNORA40.16-201ENST00000517238 ZNF720Q7Z2F6 126 aa-5.22□□□□□ -3.25
SNORA40.16-201ENST00000517238 FAM107BQ9H098 131 aa-5.22□□□□□ -3.25
SNORA40.16-201ENST00000517238 ABRACLQ9P1F3 81 aa-5.22□□□□□ -3.25
SNORA40.16-201ENST00000517238 KAAG1Q9UBP8 84 aa-5.22□□□□□ -3.25
SNORA40.16-201ENST00000517238 HSPB11Q9Y547 144 aa-5.22□□□□□ -3.25
SNORA40.16-201ENST00000517238 ROCK2O75116 1388 aaKnown RBP-5.23□□□□□ -3.25
SNORA40.16-201ENST00000517238 FAM24AA6NFZ4 105 aa-5.23□□□□□ -3.25
SNORA40.16-201ENST00000517238 NDUFB1O75438 58 aa-5.23□□□□□ -3.25
SNORA40.16-201ENST00000517238 POLR2KP53803 58 aaKnown RBP-5.23□□□□□ -3.25
SNORA40.16-201ENST00000517238 PCBD2Q9H0N5 130 aa-5.23□□□□□ -3.25
SNORA40.16-201ENST00000517238 NRXN1Q9ULB1 1477 aa-5.24□□□□□ -3.25
SNORA40.16-201ENST00000517238 H3BQ15 152 aa-5.24□□□□□ -3.25
SNORA40.16-201ENST00000517238 GID8Q9NWU2 228 aa-5.24□□□□□ -3.25
SNORA40.16-201ENST00000517238 FAM208AQ9UK61 1670 aaKnown RBP-5.25□□□□□ -3.25
SNORA40.16-201ENST00000517238 HMGA1P17096 107 aaKnown RBP-5.26□□□□□ -3.25
SNORA40.16-201ENST00000517238 MYOM2P54296 1465 aa-5.26□□□□□ -3.25
SNORA40.16-201ENST00000517238 RPS25P62851 125 aaKnown RBP-5.27□□□□□ -3.25
SNORA40.16-201ENST00000517238 hADV29S1A0JD25 119 aa-5.28□□□□□ -3.25
SNORA40.16-201ENST00000517238 LINC00032P0C843 101 aa-5.28□□□□□ -3.25
SNORA40.16-201ENST00000517238 DR1Q01658 176 aa-5.28□□□□□ -3.25
SNORA40.16-201ENST00000517238 MEIG1Q5JSS6 88 aa-5.28□□□□□ -3.25
SNORA40.16-201ENST00000517238 PAIP2BQ9ULR5 123 aaKnown RBP-5.28□□□□□ -3.25
SNORA40.16-201ENST00000517238 FOCADQ5VW36 1801 aa-5.28□□□□□ -3.25
SNORA40.16-201ENST00000517238 ABCA3Q99758 1704 aa-5.28□□□□□ -3.26
SNORA40.16-201ENST00000517238 PFDN5Q99471 154 aa-5.29□□□□□ -3.26
SNORA40.16-201ENST00000517238 ANKRD26Q9UPS8 1709 aa-5.3□□□□□ -3.26
SNORA40.16-201ENST00000517238 TSTD1Q8NFU3 115 aa-5.3□□□□□ -3.26
SNORA40.16-201ENST00000517238 DPY30Q9C005 99 aa-5.3□□□□□ -3.26
SNORA40.16-201ENST00000517238 INO80Q9ULG1 1556 aaPredicted RBP-5.32□□□□□ -3.26
SNORA40.16-201ENST00000517238 KTN1Q86UP2 1357 aaKnown RBP-5.32□□□□□ -3.26
SNORA40.16-201ENST00000517238 ARFGEF2Q9Y6D5 1785 aa-5.32□□□□□ -3.26
SNORA40.16-201ENST00000517238 UMAD1C9J7I0 102 aa-5.33□□□□□ -3.26
SNORA40.16-201ENST00000517238 ATOX1O00244 68 aa-5.34□□□□□ -3.26
SNORA40.16-201ENST00000517238 UBL5Q9BZL1 73 aa-5.34□□□□□ -3.26
SNORA40.16-201ENST00000517238 KCNQ1DNQ9H478 68 aa-5.34□□□□□ -3.26
SNORA40.16-201ENST00000517238 LZICQ8WZA0 190 aa-5.35□□□□□ -3.27
SNORA40.16-201ENST00000517238 ARHGAP5Q13017 1502 aa-5.35□□□□□ -3.27
SNORA40.16-201ENST00000517238 MYO5CQ9NQX4 1742 aa-5.36□□□□□ -3.27
SNORA40.16-201ENST00000517238 CCDC88BA6NC98 1476 aa-5.36□□□□□ -3.27
SNORA40.16-201ENST00000517238 A0A1B0GV72 72 aa-5.36□□□□□ -3.27
SNORA40.16-201ENST00000517238 SPANXA1Q9NS26 97 aa-5.36□□□□□ -3.27
SNORA40.16-201ENST00000517238 NAIPQ13075 1403 aa-5.37□□□□□ -3.27
SNORA40.16-201ENST00000517238 ARHGAP35Q9NRY4 1499 aa-5.38□□□□□ -3.27
SNORA40.16-201ENST00000517238 HFM1A2PYH4 1435 aa-5.38□□□□□ -3.27
SNORA40.16-201ENST00000517238 RNF17Q9BXT8 1623 aaKnown RBP-5.38□□□□□ -3.27
SNORA40.16-201ENST00000517238 ARPC4P59998 168 aa-5.39□□□□□ -3.27
SNORA40.16-201ENST00000517238 RRBP1Q9P2E9 1410 aaKnown RBP-5.4□□□□□ -3.27
SNORA40.16-201ENST00000517238 DDA1Q9BW61 102 aa-5.4□□□□□ -3.27
SNORA40.16-201ENST00000517238 CKS1BP61024 79 aa-5.41□□□□□ -3.28
SNORA40.16-201ENST00000517238 DEFB133Q30KQ1 61 aa-5.41□□□□□ -3.28
SNORA40.16-201ENST00000517238 RBP2P50120 134 aa-5.42□□□□□ -3.28
SNORA40.16-201ENST00000517238 NHSQ6T4R5 1651 aa-5.43□□□□□ -3.28
SNORA40.16-201ENST00000517238 HMGN2P05204 90 aaKnown RBP-5.43□□□□□ -3.28
SNORA40.16-201ENST00000517238 SMIM27A0A1W2PRY6 76 aa-5.44□□□□□ -3.28
SNORA40.16-201ENST00000517238 FAM25AB3EWG3 89 aa-5.44□□□□□ -3.28
SNORA40.16-201ENST00000517238 FAM25CB3EWG5 89 aa-5.44□□□□□ -3.28
SNORA40.16-201ENST00000517238 FAM25GB3EWG6 89 aa-5.44□□□□□ -3.28
SNORA40.16-201ENST00000517238 PMCHL2Q9BQD1 86 aa-5.44□□□□□ -3.28
SNORA40.16-201ENST00000517238 ETDCA0A1B0GVM5 59 aa-5.45□□□□□ -3.28
SNORA40.16-201ENST00000517238 CD52P31358 61 aa-5.45□□□□□ -3.28
SNORA40.16-201ENST00000517238 FANCAO15360 1455 aa-5.45□□□□□ -3.28
SNORA40.16-201ENST00000517238 UQCRHLA0A096LP55 91 aa-5.46□□□□□ -3.28
SNORA40.16-201ENST00000517238 G0S2P27469 103 aa-5.46□□□□□ -3.28
SNORA40.16-201ENST00000517238 NREPQ16612 68 aa-5.46□□□□□ -3.28
SNORA40.16-201ENST00000517238 SVBPQ8N300 66 aa-5.46□□□□□ -3.28
SNORA40.16-201ENST00000517238 WFDC10BQ8IUB3 73 aa-5.47□□□□□ -3.29
SNORA40.16-201ENST00000517238 GNGT2O14610 69 aa-5.48□□□□□ -3.29
SNORA40.16-201ENST00000517238 C3P01024 1663 aa-5.49□□□□□ -3.29
SNORA40.16-201ENST00000517238 CENPHQ9H3R5 247 aa-5.49□□□□□ -3.29
SNORA40.16-201ENST00000517238 URB2Q14146 1524 aaKnown RBP-5.49□□□□□ -3.29
SNORA40.16-201ENST00000517238 SARNPP82979 210 aaKnown RBP-5.5□□□□□ -3.29
SNORA40.16-201ENST00000517238 EPRSP07814 1512 aaKnown RBP-5.5□□□□□ -3.29
SNORA40.16-201ENST00000517238 UTRNP46939 3433 aa-5.5□□□□□ -3.29
SNORA40.16-201ENST00000517238 TTC37Q6PGP7 1564 aa-5.51□□□□□ -3.29
SNORA40.16-201ENST00000517238 PYDC1Q8WXC3 89 aa-5.52□□□□□ -3.29
SNORA40.16-201ENST00000517238 RALGAPBQ86X10 1494 aa-5.52□□□□□ -3.29
SNORA40.16-201ENST00000517238 EIF2AK4Q9P2K8 1649 aaKnown RBP-5.52□□□□□ -3.29
SNORA40.16-201ENST00000517238 CLTCQ00610 1675 aaKnown RBP-5.53□□□□□ -3.29
SNORA40.16-201ENST00000517238 UNC13AQ9UPW8 1703 aa-5.53□□□□□ -3.29
SNORA40.16-201ENST00000517238 E5RI56 91 aa-5.53□□□□□ -3.29
SNORA40.16-201ENST00000517238 AKAIN1P0CW23 69 aa-5.53□□□□□ -3.29
SNORA40.16-201ENST00000517238 SELENOWP63302 87 aa-5.53□□□□□ -3.29
SNORA40.16-201ENST00000517238 IER3IP1Q9Y5U9 82 aa-5.53□□□□□ -3.29
SNORA40.16-201ENST00000517238 GNG10P50151 68 aa-5.54□□□□□ -3.3
SNORA40.16-201ENST00000517238 PEA15Q15121 130 aa-5.54□□□□□ -3.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms