RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 RPL39P62891 51 aaKnown RBP1.49□□□□□ -2.17
RN7SKP40-201ENST00000517211 DEFB112Q30KQ8 113 aa1.49□□□□□ -2.17
RN7SKP40-201ENST00000517211 DEFB119Q8N690 84 aa1.49□□□□□ -2.17
RN7SKP40-201ENST00000517211 Q8N9L7 120 aa1.49□□□□□ -2.17
RN7SKP40-201ENST00000517211 LINC00304Q8N9R0 145 aa1.49□□□□□ -2.17
RN7SKP40-201ENST00000517211 COX14Q96I36 57 aa1.49□□□□□ -2.17
RN7SKP40-201ENST00000517211 Q96NJ1 140 aa1.49□□□□□ -2.17
RN7SKP40-201ENST00000517211 SONP18583 2426 aaKnown RBP1.49□□□□□ -2.17
RN7SKP40-201ENST00000517211 DOCK10Q96BY6 2186 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 HIVEP2P31629 2446 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 TRGV2A0A075B6R0 118 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 INE1O15225 51 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 IGLV6-57P01721 117 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 IGKV4-1P06312 121 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 LINC00315P59091 139 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 PRB3Q04118 309 aaPredicted RBP1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 DEFB110Q30KQ9 67 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 LEAP2Q969E1 77 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 LINC00472Q9H8W2 130 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 TACC2O95359 2948 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 TENM3Q9P273 2699 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 MUC2Q02817 5179 aa1.48□□□□□ -2.17
RN7SKP40-201ENST00000517211 SEC16AO15027 2179 aa1.47□□□□□ -2.17
RN7SKP40-201ENST00000517211 TENM2Q9NT68 2774 aa1.47□□□□□ -2.17
RN7SKP40-201ENST00000517211 M0R2N4 97 aa1.47□□□□□ -2.17
RN7SKP40-201ENST00000517211 NDUFA4O00483 81 aa1.47□□□□□ -2.17
RN7SKP40-201ENST00000517211 ACYP2P14621 99 aa1.47□□□□□ -2.17
RN7SKP40-201ENST00000517211 TMEM167AQ8TBQ9 72 aa1.47□□□□□ -2.17
RN7SKP40-201ENST00000517211 SMIM11BQ8TCY0 68 aa1.47□□□□□ -2.17
RN7SKP40-201ENST00000517211 HECTD4Q9Y4D8 3996 aa1.47□□□□□ -2.17
RN7SKP40-201ENST00000517211 DNAH1Q9P2D7 4330 aa1.46□□□□□ -2.18
RN7SKP40-201ENST00000517211 KNTC1P50748 2209 aa1.46□□□□□ -2.18
RN7SKP40-201ENST00000517211 A0A1B0GU69 56 aa1.46□□□□□ -2.18
RN7SKP40-201ENST00000517211 LINC00959A0A1B0GUT2 108 aa1.46□□□□□ -2.18
RN7SKP40-201ENST00000517211 POLR2KP53803 58 aaKnown RBP1.46□□□□□ -2.18
RN7SKP40-201ENST00000517211 WT1-ASQ06250 92 aa1.46□□□□□ -2.18
RN7SKP40-201ENST00000517211 DEFB109BQ30KR1 87 aa1.46□□□□□ -2.18
RN7SKP40-201ENST00000517211 ALPK2Q86TB3 2170 aa1.46□□□□□ -2.18
RN7SKP40-201ENST00000517211 HERC1Q15751 4861 aa1.46□□□□□ -2.18
RN7SKP40-201ENST00000517211 ETDCA0A1B0GVM5 59 aa1.45□□□□□ -2.18
RN7SKP40-201ENST00000517211 MRPL33O75394 65 aaKnown RBP1.45□□□□□ -2.18
RN7SKP40-201ENST00000517211 LINC00158P58513 81 aa1.45□□□□□ -2.18
RN7SKP40-201ENST00000517211 COA5Q86WW8 74 aa1.45□□□□□ -2.18
RN7SKP40-201ENST00000517211 DEFB104AQ8WTQ1 72 aa1.45□□□□□ -2.18
RN7SKP40-201ENST00000517211 F5P12259 2224 aa1.45□□□□□ -2.18
RN7SKP40-201ENST00000517211 DYNC2H1Q8NCM8 4307 aaKnown RBP1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 IGKV2-28A0A075B6P5 120 aa1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 IGKV2D-28P01615 120 aa1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 APELAP0DMC3 54 aa1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 COX7BP24311 80 aa1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 DEFB114Q30KQ6 69 aa1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 LYSTQ99698 3801 aa1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 ANAPC11Q9NYG5 84 aa1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 CDKN2A-AS1Q9UH64 79 aa1.44□□□□□ -2.18
RN7SKP40-201ENST00000517211 ABCA13Q86UQ4 5058 aa1.43□□□□□ -2.18
RN7SKP40-201ENST00000517211 SHANK1Q9Y566 2161 aa1.43□□□□□ -2.18
RN7SKP40-201ENST00000517211 IGKV2-24A0A0C4DH68 120 aa1.43□□□□□ -2.18
RN7SKP40-201ENST00000517211 I3L2K1 104 aa1.43□□□□□ -2.18
RN7SKP40-201ENST00000517211 Q6ZQY7 126 aa1.43□□□□□ -2.18
RN7SKP40-201ENST00000517211 CCL19Q99731 98 aa1.43□□□□□ -2.18
RN7SKP40-201ENST00000517211 FREM1Q5H8C1 2179 aa1.42□□□□□ -2.18
RN7SKP40-201ENST00000517211 CMYA5Q8N3K9 4069 aa1.42□□□□□ -2.18
RN7SKP40-201ENST00000517211 PLAC4Q8WY50 150 aa1.42□□□□□ -2.18
RN7SKP40-201ENST00000517211 TOMM7Q9P0U1 55 aa1.42□□□□□ -2.18
RN7SKP40-201ENST00000517211 SACSQ9NZJ4 4579 aa1.42□□□□□ -2.18
RN7SKP40-201ENST00000517211 PKDREJQ9NTG1 2253 aa1.42□□□□□ -2.18
RN7SKP40-201ENST00000517211 CACNA1CQ13936 2221 aa1.42□□□□□ -2.18
RN7SKP40-201ENST00000517211 COL7A1Q02388 2944 aa1.41□□□□□ -2.18
RN7SKP40-201ENST00000517211 K7EIM0 57 aa1.41□□□□□ -2.18
RN7SKP40-201ENST00000517211 M0QY20 66 aa1.41□□□□□ -2.18
RN7SKP40-201ENST00000517211 KRTAP13-2Q52LG2 175 aa1.41□□□□□ -2.18
RN7SKP40-201ENST00000517211 PRR9Q5T870 116 aa1.41□□□□□ -2.18
RN7SKP40-201ENST00000517211 LINC00575Q6W349 94 aa1.41□□□□□ -2.18
RN7SKP40-201ENST00000517211 Q6ZRX8 168 aa1.41□□□□□ -2.18
RN7SKP40-201ENST00000517211 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
RN7SKP40-201ENST00000517211 KCNQ1DNQ9H478 68 aa1.41□□□□□ -2.18
RN7SKP40-201ENST00000517211 ANK3Q12955 4377 aaKnown RBP1.4□□□□□ -2.18
RN7SKP40-201ENST00000517211 Q6ZRN7 208 aaPredicted RBP1.4□□□□□ -2.19
RN7SKP40-201ENST00000517211 TNCP24821 2201 aa1.39□□□□□ -2.19
RN7SKP40-201ENST00000517211 COX6A2Q02221 97 aa1.39□□□□□ -2.19
RN7SKP40-201ENST00000517211 C10orf99Q6UWK7 81 aa1.39□□□□□ -2.19
RN7SKP40-201ENST00000517211 CNTRLQ7Z7A1 2325 aa1.38□□□□□ -2.19
RN7SKP40-201ENST00000517211 GVQW2A0A096LPI5 108 aaPredicted RBP1.38□□□□□ -2.19
RN7SKP40-201ENST00000517211 G3V318 75 aa1.38□□□□□ -2.19
RN7SKP40-201ENST00000517211 DEFB108BQ8NET1 73 aa1.38□□□□□ -2.19
RN7SKP40-201ENST00000517211 CSMD3Q7Z407 3707 aa1.38□□□□□ -2.19
RN7SKP40-201ENST00000517211 A0A096LNT2 108 aa1.37□□□□□ -2.19
RN7SKP40-201ENST00000517211 LY6G6CO95867 125 aa1.37□□□□□ -2.19
RN7SKP40-201ENST00000517211 WFDC10BQ8IUB3 73 aa1.37□□□□□ -2.19
RN7SKP40-201ENST00000517211 WFDC13Q8IUB5 93 aa1.37□□□□□ -2.19
RN7SKP40-201ENST00000517211 FRAS1Q86XX4 4008 aa1.37□□□□□ -2.19
RN7SKP40-201ENST00000517211 KNL1Q8NG31 2342 aa1.37□□□□□ -2.19
RN7SKP40-201ENST00000517211 DEFB131BA0A096LNP1 70 aa1.36□□□□□ -2.19
RN7SKP40-201ENST00000517211 SPTY2D1-AS1A0A0U1RR47 76 aa1.36□□□□□ -2.19
RN7SKP40-201ENST00000517211 K7EQZ3 153 aa1.36□□□□□ -2.19
RN7SKP40-201ENST00000517211 AKAP6Q13023 2319 aa1.36□□□□□ -2.19
RN7SKP40-201ENST00000517211 SPINK13Q1W4C9 94 aa1.36□□□□□ -2.19
RN7SKP40-201ENST00000517211 Q8IZM0 81 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms