RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 ATP10BO94823 1461 aa-4.85□□□□□ -3.19
SCARNA23-201ENST00000516060 ABCA3Q99758 1704 aa-4.86□□□□□ -3.19
SCARNA23-201ENST00000516060 CROCC2H7BZ55 1655 aa-4.86□□□□□ -3.19
SCARNA23-201ENST00000516060 THOC2Q8NI27 1593 aaKnown RBP-4.86□□□□□ -3.19
SCARNA23-201ENST00000516060 AKAIN1P0CW23 69 aa-4.86□□□□□ -3.19
SCARNA23-201ENST00000516060 ZNF720Q7Z2F6 126 aa-4.86□□□□□ -3.19
SCARNA23-201ENST00000516060 NCBP2-AS2Q69YL0 99 aa-4.87□□□□□ -3.19
SCARNA23-201ENST00000516060 DIP2BQ9P265 1576 aa-4.87□□□□□ -3.19
SCARNA23-201ENST00000516060 PLGLAQ15195 96 aa-4.9□□□□□ -3.19
SCARNA23-201ENST00000516060 SVBPQ8N300 66 aa-4.9□□□□□ -3.19
SCARNA23-201ENST00000516060 MED14O60244 1454 aa-4.9□□□□□ -3.19
SCARNA23-201ENST00000516060 CCNB3Q8WWL7 1395 aa-4.91□□□□□ -3.19
SCARNA23-201ENST00000516060 MYOM2P54296 1465 aa-4.91□□□□□ -3.2
SCARNA23-201ENST00000516060 CYB5AP00167 134 aa-4.92□□□□□ -3.2
SCARNA23-201ENST00000516060 SFTA3P0C7M3 94 aa-4.92□□□□□ -3.2
SCARNA23-201ENST00000516060 PPLO60437 1756 aa-4.93□□□□□ -3.2
SCARNA23-201ENST00000516060 TJP1Q07157 1748 aa-4.93□□□□□ -3.2
SCARNA23-201ENST00000516060 NRKQ7Z2Y5 1582 aa-4.93□□□□□ -3.2
SCARNA23-201ENST00000516060 UNC80Q8N2C7 3258 aa-4.93□□□□□ -3.2
SCARNA23-201ENST00000516060 DEFB131BA0A096LNP1 70 aa-4.95□□□□□ -3.2
SCARNA23-201ENST00000516060 UBR1Q8IWV7 1749 aa-4.95□□□□□ -3.2
SCARNA23-201ENST00000516060 IER3IP1Q9Y5U9 82 aa-4.96□□□□□ -3.2
SCARNA23-201ENST00000516060 PYDC1Q8WXC3 89 aa-4.97□□□□□ -3.21
SCARNA23-201ENST00000516060 MAP3K4Q9Y6R4 1608 aa-4.97□□□□□ -3.21
SCARNA23-201ENST00000516060 SNAPC5O75971 98 aa-4.98□□□□□ -3.21
SCARNA23-201ENST00000516060 MINOS1Q5TGZ0 78 aa-4.98□□□□□ -3.21
SCARNA23-201ENST00000516060 CLTCQ00610 1675 aaKnown RBP-4.99□□□□□ -3.21
SCARNA23-201ENST00000516060 ARFGEF2Q9Y6D5 1785 aa-4.99□□□□□ -3.21
SCARNA23-201ENST00000516060 CD163L1Q9NR16 1453 aa-5□□□□□ -3.21
SCARNA23-201ENST00000516060 NRAPQ86VF7 1730 aa-5□□□□□ -3.21
SCARNA23-201ENST00000516060 ROCK2O75116 1388 aaKnown RBP-5□□□□□ -3.21
SCARNA23-201ENST00000516060 ZFYVE16Q7Z3T8 1539 aa-5□□□□□ -3.21
SCARNA23-201ENST00000516060 NDUFA4O00483 81 aa-5□□□□□ -3.21
SCARNA23-201ENST00000516060 GNGT2O14610 69 aa-5□□□□□ -3.21
SCARNA23-201ENST00000516060 ACBD7Q8N6N7 88 aa-5□□□□□ -3.21
SCARNA23-201ENST00000516060 NDUFB1O75438 58 aa-5.01□□□□□ -3.21
SCARNA23-201ENST00000516060 RICTORQ6R327 1708 aa-5.01□□□□□ -3.21
SCARNA23-201ENST00000516060 DNAH12Q6ZR08 3092 aa-5.01□□□□□ -3.21
SCARNA23-201ENST00000516060 RPL13AP3Q6NVV1 102 aa-5.02□□□□□ -3.21
SCARNA23-201ENST00000516060 NCOA2Q15596 1464 aa-5.02□□□□□ -3.21
SCARNA23-201ENST00000516060 IFI27P40305 119 aaPredicted RBP-5.03□□□□□ -3.21
SCARNA23-201ENST00000516060 VCANP13611 3396 aa-5.05□□□□□ -3.22
SCARNA23-201ENST00000516060 UQCRHLA0A096LP55 91 aa-5.05□□□□□ -3.22
SCARNA23-201ENST00000516060 ATOX1O00244 68 aa-5.05□□□□□ -3.22
SCARNA23-201ENST00000516060 HMGN2P05204 90 aaKnown RBP-5.05□□□□□ -3.22
SCARNA23-201ENST00000516060 CRIP1P50238 77 aa-5.05□□□□□ -3.22
SCARNA23-201ENST00000516060 C20orf78Q9BR46 151 aa-5.05□□□□□ -3.22
SCARNA23-201ENST00000516060 CCDC88BA6NC98 1476 aa-5.06□□□□□ -3.22
SCARNA23-201ENST00000516060 MRPL33O75394 65 aaKnown RBP-5.06□□□□□ -3.22
SCARNA23-201ENST00000516060 PMCHL2Q9BQD1 86 aa-5.06□□□□□ -3.22
SCARNA23-201ENST00000516060 LOC400499M0QZD8 3231 aa-5.06□□□□□ -3.22
SCARNA23-201ENST00000516060 NALCNQ8IZF0 1738 aa-5.06□□□□□ -3.22
SCARNA23-201ENST00000516060 PZPP20742 1482 aa-5.07□□□□□ -3.22
SCARNA23-201ENST00000516060 FCER1GP30273 86 aa-5.07□□□□□ -3.22
SCARNA23-201ENST00000516060 ASPMQ8IZT6 3477 aa-5.07□□□□□ -3.22
SCARNA23-201ENST00000516060 KIF14Q15058 1648 aa-5.08□□□□□ -3.22
SCARNA23-201ENST00000516060 C6orf48Q9UBA6 75 aa-5.08□□□□□ -3.22
SCARNA23-201ENST00000516060 EPRSP07814 1512 aaKnown RBP-5.08□□□□□ -3.22
SCARNA23-201ENST00000516060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-5.08□□□□□ -3.22
SCARNA23-201ENST00000516060 RNF17Q9BXT8 1623 aaKnown RBP-5.08□□□□□ -3.22
SCARNA23-201ENST00000516060 MRPS10P82664 201 aaKnown RBP-5.09□□□□□ -3.22
SCARNA23-201ENST00000516060 ASXL1Q8IXJ9 1541 aa-5.09□□□□□ -3.22
SCARNA23-201ENST00000516060 PPP3R1P63098 170 aa-5.1□□□□□ -3.23
SCARNA23-201ENST00000516060 NEXMIFQ5QGS0 1516 aa-5.11□□□□□ -3.23
SCARNA23-201ENST00000516060 INO80Q9ULG1 1556 aaPredicted RBP-5.12□□□□□ -3.23
SCARNA23-201ENST00000516060 FANCAO15360 1455 aa-5.13□□□□□ -3.23
SCARNA23-201ENST00000516060 UMAD1C9J7I0 102 aa-5.13□□□□□ -3.23
SCARNA23-201ENST00000516060 GNG4P50150 75 aa-5.13□□□□□ -3.23
SCARNA23-201ENST00000516060 LINC00032P0C843 101 aa-5.14□□□□□ -3.23
SCARNA23-201ENST00000516060 COL5A1-AS1Q5SY13 56 aa-5.14□□□□□ -3.23
SCARNA23-201ENST00000516060 FAM208AQ9UK61 1670 aaKnown RBP-5.15□□□□□ -3.23
SCARNA23-201ENST00000516060 PREX2Q70Z35 1606 aa-5.16□□□□□ -3.24
SCARNA23-201ENST00000516060 URB2Q14146 1524 aaKnown RBP-5.17□□□□□ -3.24
SCARNA23-201ENST00000516060 MYO5CQ9NQX4 1742 aa-5.17□□□□□ -3.24
SCARNA23-201ENST00000516060 FAUP35544 74 aaKnown RBP-5.18□□□□□ -3.24
SCARNA23-201ENST00000516060 UNC13AQ9UPW8 1703 aa-5.18□□□□□ -3.24
SCARNA23-201ENST00000516060 KCNQ1DNQ9H478 68 aa-5.19□□□□□ -3.24
SCARNA23-201ENST00000516060 CENPFP49454 3210 aa-5.19□□□□□ -3.24
SCARNA23-201ENST00000516060 ARHGAP35Q9NRY4 1499 aa-5.2□□□□□ -3.24
SCARNA23-201ENST00000516060 MYO3AQ8NEV4 1616 aa-5.2□□□□□ -3.24
SCARNA23-201ENST00000516060 MYMXA0A1B0GTQ4 84 aa-5.22□□□□□ -3.25
SCARNA23-201ENST00000516060 NDUFA2O43678 99 aa-5.22□□□□□ -3.25
SCARNA23-201ENST00000516060 DPY30Q9C005 99 aa-5.22□□□□□ -3.25
SCARNA23-201ENST00000516060 HFM1A2PYH4 1435 aa-5.23□□□□□ -3.25
SCARNA23-201ENST00000516060 CLASP1Q7Z460 1538 aa-5.23□□□□□ -3.25
SCARNA23-201ENST00000516060 PEA15Q15121 130 aa-5.23□□□□□ -3.25
SCARNA23-201ENST00000516060 EEA1Q15075 1411 aa-5.23□□□□□ -3.25
SCARNA23-201ENST00000516060 SMIM11AP58511 58 aa-5.24□□□□□ -3.25
SCARNA23-201ENST00000516060 NREPQ16612 68 aa-5.24□□□□□ -3.25
SCARNA23-201ENST00000516060 SARNPP82979 210 aaKnown RBP-5.25□□□□□ -3.25
SCARNA23-201ENST00000516060 TTTY10Q9BZA0 68 aa-5.25□□□□□ -3.25
SCARNA23-201ENST00000516060 UBL5Q9BZL1 73 aa-5.25□□□□□ -3.25
SCARNA23-201ENST00000516060 CORTO00230 105 aa-5.26□□□□□ -3.25
SCARNA23-201ENST00000516060 TMEM203Q969S6 136 aa-5.26□□□□□ -3.25
SCARNA23-201ENST00000516060 XIRP2A4UGR9 3374 aa-5.27□□□□□ -3.25
SCARNA23-201ENST00000516060 CFAP43Q8NDM7 1665 aa-5.27□□□□□ -3.25
SCARNA23-201ENST00000516060 GTF2H5Q6ZYL4 71 aa-5.28□□□□□ -3.25
SCARNA23-201ENST00000516060 S100A1P23297 94 aa-5.29□□□□□ -3.26
SCARNA23-201ENST00000516060 KRTAP19-2Q3LHN2 52 aa-5.29□□□□□ -3.26
SCARNA23-201ENST00000516060 CEBPZOSA8MTT3 80 aa-5.3□□□□□ -3.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms