RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 ZNF861PO60384 105 aa8.24□□□□□ -1.09
SH3TC1-225ENST00000515682 PANO1I0J062 215 aa8.22□□□□□ -1.09
SH3TC1-225ENST00000515682 PLA2G1BP04054 148 aaKnown RBP8.21□□□□□ -1.09
SH3TC1-225ENST00000515682 TYMSOSQ8TAI1 123 aa8.21□□□□□ -1.1
SH3TC1-225ENST00000515682 UQCR11O14957 56 aa8.21□□□□□ -1.1
SH3TC1-225ENST00000515682 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.1
SH3TC1-225ENST00000515682 A0A087X002 238 aa8.19□□□□□ -1.1
SH3TC1-225ENST00000515682 NOTCH2NLQ7Z3S9 236 aa8.19□□□□□ -1.1
SH3TC1-225ENST00000515682 SRRM2Q9UQ35 2752 aaKnown RBP8.18□□□□□ -1.1
SH3TC1-225ENST00000515682 A6NN06 94 aa8.16□□□□□ -1.1
SH3TC1-225ENST00000515682 IGLV7-43P04211 117 aa8.16□□□□□ -1.1
SH3TC1-225ENST00000515682 ZNF469Q96JG9 3925 aaPredicted RBP8.14□□□□□ -1.11
SH3TC1-225ENST00000515682 Q6ZR54 194 aa8.14□□□□□ -1.11
SH3TC1-225ENST00000515682 TRRAPQ9Y4A5 3859 aa8.13□□□□□ -1.11
SH3TC1-225ENST00000515682 Q5W150 140 aa8.11□□□□□ -1.11
SH3TC1-225ENST00000515682 SSBP3-AS1Q7Z2R9 100 aa8.08□□□□□ -1.12
SH3TC1-225ENST00000515682 Q96NJ1 140 aa8.08□□□□□ -1.12
SH3TC1-225ENST00000515682 K7ERS5 55 aa8.08□□□□□ -1.12
SH3TC1-225ENST00000515682 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
SH3TC1-225ENST00000515682 Q8N1X5 172 aa8.06□□□□□ -1.12
SH3TC1-225ENST00000515682 TENM2Q9NT68 2774 aa8.06□□□□□ -1.12
SH3TC1-225ENST00000515682 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
SH3TC1-225ENST00000515682 KRTAP21-3Q3LHN1 58 aa8.04□□□□□ -1.12
SH3TC1-225ENST00000515682 PLAC8Q9NZF1 115 aa8.04□□□□□ -1.12
SH3TC1-225ENST00000515682 AKAP9Q99996 3911 aa8.04□□□□□ -1.12
SH3TC1-225ENST00000515682 DMBT1Q9UGM3 2413 aaPredicted RBP8.03□□□□□ -1.12
SH3TC1-225ENST00000515682 KRTAP10-2P60368 255 aa8.03□□□□□ -1.12
SH3TC1-225ENST00000515682 LINC00304Q8N9R0 145 aa8.01□□□□□ -1.13
SH3TC1-225ENST00000515682 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
SH3TC1-225ENST00000515682 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
SH3TC1-225ENST00000515682 KRTAP10-1P60331 282 aa7.98□□□□□ -1.13
SH3TC1-225ENST00000515682 DMAC1Q96GE9 116 aa7.98□□□□□ -1.13
SH3TC1-225ENST00000515682 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
SH3TC1-225ENST00000515682 ANK3Q12955 4377 aaKnown RBP7.97□□□□□ -1.13
SH3TC1-225ENST00000515682 FLG2Q5D862 2391 aaPredicted RBP7.95□□□□□ -1.14
SH3TC1-225ENST00000515682 Q6ZRN7 208 aaPredicted RBP7.95□□□□□ -1.14
SH3TC1-225ENST00000515682 TGP01266 2768 aa7.95□□□□□ -1.14
SH3TC1-225ENST00000515682 J3QL48 77 aa7.92□□□□□ -1.14
SH3TC1-225ENST00000515682 H3BS24 57 aa7.91□□□□□ -1.14
SH3TC1-225ENST00000515682 COL7A1Q02388 2944 aa7.9□□□□□ -1.14
SH3TC1-225ENST00000515682 C9orf92A6NGG3 77 aa7.89□□□□□ -1.15
SH3TC1-225ENST00000515682 ASB16-AS1Q495Z4 193 aa7.87□□□□□ -1.15
SH3TC1-225ENST00000515682 SPATA8Q6RVD6 105 aa7.86□□□□□ -1.15
SH3TC1-225ENST00000515682 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
SH3TC1-225ENST00000515682 CSMD3Q7Z407 3707 aa7.82□□□□□ -1.16
SH3TC1-225ENST00000515682 A0A1B0GU33 70 aa7.78□□□□□ -1.16
SH3TC1-225ENST00000515682 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
SH3TC1-225ENST00000515682 Q5VSD8 79 aa7.73□□□□□ -1.17
SH3TC1-225ENST00000515682 A0A0D9SG42 100 aa7.72□□□□□ -1.17
SH3TC1-225ENST00000515682 KRTAP13-2Q52LG2 175 aa7.69□□□□□ -1.18
SH3TC1-225ENST00000515682 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
SH3TC1-225ENST00000515682 KRTAP13-3Q3SY46 172 aa7.64□□□□□ -1.19
SH3TC1-225ENST00000515682 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
SH3TC1-225ENST00000515682 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
SH3TC1-225ENST00000515682 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
SH3TC1-225ENST00000515682 Q6ZSA8 131 aa7.52□□□□□ -1.2
SH3TC1-225ENST00000515682 MEGF8Q7Z7M0 2845 aa7.51□□□□□ -1.21
SH3TC1-225ENST00000515682 KRTAP16-1A8MUX0 517 aa7.5□□□□□ -1.21
SH3TC1-225ENST00000515682 H0YAA0 97 aa7.48□□□□□ -1.21
SH3TC1-225ENST00000515682 DNAH10Q8IVF4 4471 aa7.45□□□□□ -1.22
SH3TC1-225ENST00000515682 ROMO1P60602 79 aa7.44□□□□□ -1.22
SH3TC1-225ENST00000515682 A8MUU9 505 aa7.43□□□□□ -1.22
SH3TC1-225ENST00000515682 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
SH3TC1-225ENST00000515682 KRTAP1-4P0C5Y4 121 aa7.41□□□□□ -1.22
SH3TC1-225ENST00000515682 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
SH3TC1-225ENST00000515682 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
SH3TC1-225ENST00000515682 S4R3F8 94 aa7.3□□□□□ -1.24
SH3TC1-225ENST00000515682 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
SH3TC1-225ENST00000515682 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
SH3TC1-225ENST00000515682 ANK2Q01484 3957 aa7.24□□□□□ -1.25
SH3TC1-225ENST00000515682 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
SH3TC1-225ENST00000515682 A0A1B0GVY2 172 aa7.22□□□□□ -1.25
SH3TC1-225ENST00000515682 NDUFAF8A1L188 74 aa7.21□□□□□ -1.25
SH3TC1-225ENST00000515682 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
SH3TC1-225ENST00000515682 M0R2T5 61 aa7.14□□□□□ -1.27
SH3TC1-225ENST00000515682 DNAH9Q9NYC9 4486 aa7.14□□□□□ -1.27
SH3TC1-225ENST00000515682 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
SH3TC1-225ENST00000515682 LYSTQ99698 3801 aa7.13□□□□□ -1.27
SH3TC1-225ENST00000515682 DNHD1Q96M86 4753 aa7.08□□□□□ -1.28
SH3TC1-225ENST00000515682 DNAH1Q9P2D7 4330 aa7.04□□□□□ -1.28
SH3TC1-225ENST00000515682 P0C880 135 aa7.04□□□□□ -1.28
SH3TC1-225ENST00000515682 DNAH8Q96JB1 4490 aa7.04□□□□□ -1.28
SH3TC1-225ENST00000515682 R4GN34 69 aa7.02□□□□□ -1.29
SH3TC1-225ENST00000515682 M0QZ58 72 aa7.02□□□□□ -1.29
SH3TC1-225ENST00000515682 TPRXLQ17RH7 258 aa6.99□□□□□ -1.29
SH3TC1-225ENST00000515682 KRTAP10-8P60410 259 aa6.98□□□□□ -1.29
SH3TC1-225ENST00000515682 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
SH3TC1-225ENST00000515682 DNAH11Q96DT5 4516 aa6.98□□□□□ -1.29
SH3TC1-225ENST00000515682 FRAS1Q86XX4 4008 aa6.97□□□□□ -1.29
SH3TC1-225ENST00000515682 XP32Q5T750 250 aa6.97□□□□□ -1.29
SH3TC1-225ENST00000515682 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.3
SH3TC1-225ENST00000515682 LUZP6Q538Z0 58 aa6.95□□□□□ -1.3
SH3TC1-225ENST00000515682 CMYA5Q8N3K9 4069 aa6.94□□□□□ -1.3
SH3TC1-225ENST00000515682 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
SH3TC1-225ENST00000515682 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.31
SH3TC1-225ENST00000515682 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
SH3TC1-225ENST00000515682 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
SH3TC1-225ENST00000515682 DNAH7Q8WXX0 4024 aa6.88□□□□□ -1.31
SH3TC1-225ENST00000515682 DNAH17Q9UFH2 4485 aa6.87□□□□□ -1.31
SH3TC1-225ENST00000515682 DNAH3Q8TD57 4116 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms