RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 K7ERU9 68 aa7.47□□□□□ -1.21
DDR1-278ENST00000515233 NAA38Q9BRA0 125 aaKnown RBP7.47□□□□□ -1.21
DDR1-278ENST00000515233 A0A1B0GX51 115 aa7.46□□□□□ -1.22
DDR1-278ENST00000515233 A0A1W2PNM2 257 aa7.46□□□□□ -1.22
DDR1-278ENST00000515233 COX6CP09669 75 aa7.46□□□□□ -1.22
DDR1-278ENST00000515233 HRES1P13985 223 aa7.46□□□□□ -1.22
DDR1-278ENST00000515233 KRTAP10-10P60014 251 aa7.45□□□□□ -1.22
DDR1-278ENST00000515233 SIGMAR1Q99720 223 aa7.45□□□□□ -1.22
DDR1-278ENST00000515233 J3QR89 54 aa7.44□□□□□ -1.22
DDR1-278ENST00000515233 SCGB1C2P0DMR2 95 aa7.44□□□□□ -1.22
DDR1-278ENST00000515233 PSMB2P49721 201 aa7.44□□□□□ -1.22
DDR1-278ENST00000515233 MACF1Q9UPN3 7388 aaKnown RBP7.43□□□□□ -1.22
DDR1-278ENST00000515233 IGKV4-1P06312 121 aa7.43□□□□□ -1.22
DDR1-278ENST00000515233 NOTCH2NLQ7Z3S9 236 aa7.43□□□□□ -1.22
DDR1-278ENST00000515233 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
DDR1-278ENST00000515233 ATXN8Q156A1 80 aa7.4□□□□□ -1.22
DDR1-278ENST00000515233 SYNE2Q8WXH0 6885 aaKnown RBP7.4□□□□□ -1.23
DDR1-278ENST00000515233 ANKRD29Q8N6D5 301 aa7.38□□□□□ -1.23
DDR1-278ENST00000515233 LINC00472Q9H8W2 130 aa7.37□□□□□ -1.23
DDR1-278ENST00000515233 DEFB116Q30KQ4 102 aa7.35□□□□□ -1.23
DDR1-278ENST00000515233 MTURNQ8N3F0 131 aa7.35□□□□□ -1.23
DDR1-278ENST00000515233 PRO0461Q9UI25 63 aa7.35□□□□□ -1.23
DDR1-278ENST00000515233 TRIAP1O43715 76 aa7.34□□□□□ -1.23
DDR1-278ENST00000515233 LINC00846Q9NV44 126 aa7.34□□□□□ -1.23
DDR1-278ENST00000515233 IGHV6-1A0A0B4J1U7 121 aa7.33□□□□□ -1.24
DDR1-278ENST00000515233 H3BQ85 93 aa7.33□□□□□ -1.24
DDR1-278ENST00000515233 H3BT86 120 aa7.33□□□□□ -1.24
DDR1-278ENST00000515233 KRTAP19-6Q3LI70 58 aa7.32□□□□□ -1.24
DDR1-278ENST00000515233 ETDBQ3ZM63 59 aa7.31□□□□□ -1.24
DDR1-278ENST00000515233 VPS25Q9BRG1 176 aa7.31□□□□□ -1.24
DDR1-278ENST00000515233 ORMDL1Q9P0S3 153 aa7.31□□□□□ -1.24
DDR1-278ENST00000515233 C9JAW5 83 aa7.3□□□□□ -1.24
DDR1-278ENST00000515233 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
DDR1-278ENST00000515233 TMEM256-PLSCR3K7ERE1 68 aa7.3□□□□□ -1.24
DDR1-278ENST00000515233 DNAL4O96015 105 aa7.3□□□□□ -1.24
DDR1-278ENST00000515233 CCKP06307 115 aa7.3□□□□□ -1.24
DDR1-278ENST00000515233 TRACP01848 142 aa7.29□□□□□ -1.24
DDR1-278ENST00000515233 A0A1B0GVX0 72 aa7.28□□□□□ -1.24
DDR1-278ENST00000515233 A0A1B0GV72 72 aa7.27□□□□□ -1.25
DDR1-278ENST00000515233 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
DDR1-278ENST00000515233 SPINK7P58062 85 aa7.27□□□□□ -1.25
DDR1-278ENST00000515233 ZCCHC13Q8WW36 166 aaKnown RBP7.27□□□□□ -1.25
DDR1-278ENST00000515233 A8MWP4 228 aa7.24□□□□□ -1.25
DDR1-278ENST00000515233 J3KT08 172 aa7.2□□□□□ -1.26
DDR1-278ENST00000515233 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
DDR1-278ENST00000515233 RBM3P98179 157 aaKnown RBP7.18□□□□□ -1.26
DDR1-278ENST00000515233 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
DDR1-278ENST00000515233 FAM240AA0A1B0GVK7 77 aa7.17□□□□□ -1.26
DDR1-278ENST00000515233 ACYP1P07311 99 aa7.17□□□□□ -1.26
DDR1-278ENST00000515233 BAALC-AS2P0C853 105 aa7.16□□□□□ -1.26
DDR1-278ENST00000515233 DSCR8Q96T75 97 aa7.16□□□□□ -1.26
DDR1-278ENST00000515233 SCGB1A1P11684 91 aa7.15□□□□□ -1.26
DDR1-278ENST00000515233 KRTAP6-3Q3LI67 103 aa7.15□□□□□ -1.26
DDR1-278ENST00000515233 NDUFB1O75438 58 aa7.14□□□□□ -1.27
DDR1-278ENST00000515233 WFDC13Q8IUB5 93 aa7.14□□□□□ -1.27
DDR1-278ENST00000515233 Q6ZQT0 140 aa7.13□□□□□ -1.27
DDR1-278ENST00000515233 JMJD7-PLA2G4BH0Y9G9 81 aa7.11□□□□□ -1.27
DDR1-278ENST00000515233 C8orf17Q9NRJ1 99 aa7.1□□□□□ -1.27
DDR1-278ENST00000515233 PCP4P48539 62 aa7.08□□□□□ -1.28
DDR1-278ENST00000515233 A0A1B0GW54 56 aa7.06□□□□□ -1.28
DDR1-278ENST00000515233 IGKV3D-7A0A0C4DH55 119 aa7.05□□□□□ -1.28
DDR1-278ENST00000515233 Q6ZVQ6 151 aa7.05□□□□□ -1.28
DDR1-278ENST00000515233 PDE6GP18545 87 aa7.04□□□□□ -1.28
DDR1-278ENST00000515233 H1FX-AS1Q4G0G2 97 aa7.04□□□□□ -1.28
DDR1-278ENST00000515233 LINC00643Q86TS7 51 aa7.01□□□□□ -1.29
DDR1-278ENST00000515233 IMUPQ9GZP8 106 aa7.01□□□□□ -1.29
DDR1-278ENST00000515233 LOC110117498A0A087WWA1 95 aa6.99□□□□□ -1.29
DDR1-278ENST00000515233 MT-ATP8P03928 68 aa6.99□□□□□ -1.29
DDR1-278ENST00000515233 PRR15Q8IV56 129 aa6.99□□□□□ -1.29
DDR1-278ENST00000515233 MRPL34Q9BQ48 92 aaKnown RBP6.98□□□□□ -1.29
DDR1-278ENST00000515233 C14orf132Q9NPU4 83 aa6.97□□□□□ -1.29
DDR1-278ENST00000515233 TMEM254Q8TBM7 123 aa6.96□□□□□ -1.3
DDR1-278ENST00000515233 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
DDR1-278ENST00000515233 NEBP20929 6669 aa6.94□□□□□ -1.3
DDR1-278ENST00000515233 NREPQ16612 68 aa6.93□□□□□ -1.3
DDR1-278ENST00000515233 ATP5EP2Q5VTU8 51 aa6.93□□□□□ -1.3
DDR1-278ENST00000515233 UBL5Q9BZL1 73 aa6.91□□□□□ -1.3
DDR1-278ENST00000515233 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
DDR1-278ENST00000515233 NDUFS5O43920 106 aa6.88□□□□□ -1.31
DDR1-278ENST00000515233 IGKV2D-30A0A075B6S6 120 aa6.87□□□□□ -1.31
DDR1-278ENST00000515233 IGKV2-30P06310 120 aa6.87□□□□□ -1.31
DDR1-278ENST00000515233 C7orf65Q6ZTY9 151 aa6.87□□□□□ -1.31
DDR1-278ENST00000515233 MUC12Q9UKN1 5478 aa6.87□□□□□ -1.31
DDR1-278ENST00000515233 K7EQZ3 153 aa6.86□□□□□ -1.31
DDR1-278ENST00000515233 A6NN06 94 aa6.85□□□□□ -1.31
DDR1-278ENST00000515233 Q5W150 140 aa6.85□□□□□ -1.31
DDR1-278ENST00000515233 ANAPC13Q9BS18 74 aa6.85□□□□□ -1.31
DDR1-278ENST00000515233 MT1BP07438 61 aa6.82□□□□□ -1.32
DDR1-278ENST00000515233 C4orf26Q17RF5 130 aa6.8□□□□□ -1.32
DDR1-278ENST00000515233 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
DDR1-278ENST00000515233 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
DDR1-278ENST00000515233 ATOX1O00244 68 aa6.79□□□□□ -1.32
DDR1-278ENST00000515233 CXCL6P80162 114 aa6.79□□□□□ -1.32
DDR1-278ENST00000515233 C5orf47Q569G3 176 aa6.78□□□□□ -1.32
DDR1-278ENST00000515233 Q5VV11 94 aa6.78□□□□□ -1.32
DDR1-278ENST00000515233 KRTAP19-8Q3LI54 63 aa6.77□□□□□ -1.33
DDR1-278ENST00000515233 SPRR2GQ9BYE4 73 aa6.77□□□□□ -1.33
DDR1-278ENST00000515233 BPY2O14599 106 aa6.76□□□□□ -1.33
DDR1-278ENST00000515233 HIST1H4AP62805 103 aaKnown RBP6.76□□□□□ -1.33
DDR1-278ENST00000515233 HCG22E2RYF7 251 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms