RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 TJP1Q07157 1748 aa-0.91□□□□□ -2.55
NEDD4-211ENST00000514893 NRAPQ86VF7 1730 aa-0.91□□□□□ -2.55
NEDD4-211ENST00000514893 UACAQ9BZF9 1416 aa-0.91□□□□□ -2.56
NEDD4-211ENST00000514893 TOGARAM1Q9Y4F4 1720 aa-0.92□□□□□ -2.56
NEDD4-211ENST00000514893 KDM5DQ9BY66 1539 aa-0.92□□□□□ -2.56
NEDD4-211ENST00000514893 DEFB131BA0A096LNP1 70 aa-0.92□□□□□ -2.56
NEDD4-211ENST00000514893 UBL5Q9BZL1 73 aa-0.92□□□□□ -2.56
NEDD4-211ENST00000514893 ZC3H13Q5T200 1668 aaKnown RBP-0.92□□□□□ -2.56
NEDD4-211ENST00000514893 ARHGAP35Q9NRY4 1499 aa-0.92□□□□□ -2.56
NEDD4-211ENST00000514893 ITSN2Q9NZM3 1697 aa-0.93□□□□□ -2.56
NEDD4-211ENST00000514893 ADIRFQ15847 76 aa-0.93□□□□□ -2.56
NEDD4-211ENST00000514893 TDRG1Q3Y452 100 aa-0.93□□□□□ -2.56
NEDD4-211ENST00000514893 MINOS1Q5TGZ0 78 aa-0.93□□□□□ -2.56
NEDD4-211ENST00000514893 KIAA1109Q2LD37 5005 aa-0.93□□□□□ -2.56
NEDD4-211ENST00000514893 RALGAPBQ86X10 1494 aa-0.93□□□□□ -2.56
NEDD4-211ENST00000514893 SACSQ9NZJ4 4579 aa-0.93□□□□□ -2.56
NEDD4-211ENST00000514893 BPTFQ12830 3046 aa-0.94□□□□□ -2.56
NEDD4-211ENST00000514893 KIF1AQ12756 1690 aa-0.94□□□□□ -2.56
NEDD4-211ENST00000514893 DNAH7Q8WXX0 4024 aa-0.94□□□□□ -2.56
NEDD4-211ENST00000514893 CMYA5Q8N3K9 4069 aa-0.94□□□□□ -2.56
NEDD4-211ENST00000514893 LAMA3Q16787 3333 aa-0.94□□□□□ -2.56
NEDD4-211ENST00000514893 CLPSL2Q6UWE3 100 aa-0.94□□□□□ -2.56
NEDD4-211ENST00000514893 DNHD1Q96M86 4753 aa-0.95□□□□□ -2.56
NEDD4-211ENST00000514893 H3BUT2 72 aa-0.95□□□□□ -2.56
NEDD4-211ENST00000514893 FCER1GP30273 86 aa-0.95□□□□□ -2.56
NEDD4-211ENST00000514893 WT1-ASQ06250 92 aa-0.95□□□□□ -2.56
NEDD4-211ENST00000514893 ST20Q9HBF5 79 aa-0.95□□□□□ -2.56
NEDD4-211ENST00000514893 DNAH8Q96JB1 4490 aa-0.96□□□□□ -2.56
NEDD4-211ENST00000514893 CRIP1P50238 77 aa-0.96□□□□□ -2.56
NEDD4-211ENST00000514893 KRTAP19-5Q3LI72 72 aa-0.96□□□□□ -2.56
NEDD4-211ENST00000514893 LY75O60449 1722 aa-0.97□□□□□ -2.56
NEDD4-211ENST00000514893 RELNP78509 3460 aa-0.97□□□□□ -2.56
NEDD4-211ENST00000514893 MMP24-AS1A0A0U1RRL7 71 aa-0.97□□□□□ -2.56
NEDD4-211ENST00000514893 TNP1P09430 55 aa-0.97□□□□□ -2.56
NEDD4-211ENST00000514893 SFTA3P0C7M3 94 aa-0.97□□□□□ -2.56
NEDD4-211ENST00000514893 LRRIQ1Q96JM4 1722 aa-0.98□□□□□ -2.57
NEDD4-211ENST00000514893 LMTK2Q8IWU2 1503 aa-0.98□□□□□ -2.57
NEDD4-211ENST00000514893 H3BVH4 76 aa-0.98□□□□□ -2.57
NEDD4-211ENST00000514893 S100A13Q99584 98 aa-0.98□□□□□ -2.57
NEDD4-211ENST00000514893 KCNQ1DNQ9H478 68 aa-0.98□□□□□ -2.57
NEDD4-211ENST00000514893 RNF17Q9BXT8 1623 aaKnown RBP-0.98□□□□□ -2.57
NEDD4-211ENST00000514893 CEP295Q9C0D2 2601 aa-0.99□□□□□ -2.57
NEDD4-211ENST00000514893 DCAF1Q9Y4B6 1507 aa-0.99□□□□□ -2.57
NEDD4-211ENST00000514893 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.99□□□□□ -2.57
NEDD4-211ENST00000514893 IGLV5-48A0A075B6I7 105 aa-0.99□□□□□ -2.57
NEDD4-211ENST00000514893 RPS27P42677 84 aaKnown RBP-0.99□□□□□ -2.57
NEDD4-211ENST00000514893 ENHOQ6UWT2 76 aa-0.99□□□□□ -2.57
NEDD4-211ENST00000514893 RPS27LQ71UM5 84 aaKnown RBP-0.99□□□□□ -2.57
NEDD4-211ENST00000514893 RYR2Q92736 4967 aa-1□□□□□ -2.57
NEDD4-211ENST00000514893 HMGA1P17096 107 aaKnown RBP-1□□□□□ -2.57
NEDD4-211ENST00000514893 DEFB121Q5J5C9 76 aa-1□□□□□ -2.57
NEDD4-211ENST00000514893 BVES-AS1Q5T3Y7 98 aa-1□□□□□ -2.57
NEDD4-211ENST00000514893 NCBP2-AS2Q69YL0 99 aa-1□□□□□ -2.57
NEDD4-211ENST00000514893 C6orf48Q9UBA6 75 aa-1□□□□□ -2.57
NEDD4-211ENST00000514893 SPTAN1Q13813 2472 aaKnown RBP-1□□□□□ -2.57
NEDD4-211ENST00000514893 CDC42BPAQ5VT25 1732 aa-1.01□□□□□ -2.57
NEDD4-211ENST00000514893 ETDCA0A1B0GVM5 59 aa-1.01□□□□□ -2.57
NEDD4-211ENST00000514893 H3BUA1 57 aa-1.01□□□□□ -2.57
NEDD4-211ENST00000514893 CHD7Q9P2D1 2997 aa-1.01□□□□□ -2.57
NEDD4-211ENST00000514893 INO80Q9ULG1 1556 aaPredicted RBP-1.01□□□□□ -2.57
NEDD4-211ENST00000514893 MYO9AB2RTY4 2548 aa-1.01□□□□□ -2.57
NEDD4-211ENST00000514893 LRBAP50851 2863 aa-1.02□□□□□ -2.57
NEDD4-211ENST00000514893 COL12A1Q99715 3063 aa-1.02□□□□□ -2.57
NEDD4-211ENST00000514893 ABCC1P33527 1531 aa-1.02□□□□□ -2.57
NEDD4-211ENST00000514893 RNF213Q63HN8 5207 aa-1.02□□□□□ -2.57
NEDD4-211ENST00000514893 NHSQ6T4R5 1651 aa-1.02□□□□□ -2.57
NEDD4-211ENST00000514893 NOP10Q9NPE3 64 aaKnown RBP-1.02□□□□□ -2.57
NEDD4-211ENST00000514893 SPENQ96T58 3664 aaKnown RBP-1.02□□□□□ -2.57
NEDD4-211ENST00000514893 MYO5CQ9NQX4 1742 aa-1.03□□□□□ -2.57
NEDD4-211ENST00000514893 SMR3BP02814 79 aaPredicted RBP-1.03□□□□□ -2.57
NEDD4-211ENST00000514893 GNG2P59768 71 aa-1.03□□□□□ -2.57
NEDD4-211ENST00000514893 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.04□□□□□ -2.58
NEDD4-211ENST00000514893 MT1XP80297 61 aa-1.04□□□□□ -2.58
NEDD4-211ENST00000514893 TRRAPQ9Y4A5 3859 aa-1.05□□□□□ -2.58
NEDD4-211ENST00000514893 MROH1Q8NDA8 1641 aa-1.05□□□□□ -2.58
NEDD4-211ENST00000514893 CELSR3Q9NYQ7 3312 aa-1.05□□□□□ -2.58
NEDD4-211ENST00000514893 ERVK-7P63135 1459 aa-1.05□□□□□ -2.58
NEDD4-211ENST00000514893 CCDC18Q5T9S5 1454 aa-1.05□□□□□ -2.58
NEDD4-211ENST00000514893 SRCAPQ6ZRS2 3230 aa-1.06□□□□□ -2.58
NEDD4-211ENST00000514893 DYNC1H1Q14204 4646 aaKnown RBP-1.06□□□□□ -2.58
NEDD4-211ENST00000514893 CFAP74Q9C0B2 1584 aa-1.06□□□□□ -2.58
NEDD4-211ENST00000514893 CFAP46Q8IYW2 2715 aa-1.07□□□□□ -2.58
NEDD4-211ENST00000514893 ABCC6O95255 1503 aa-1.07□□□□□ -2.58
NEDD4-211ENST00000514893 RB1CC1Q8TDY2 1594 aa-1.08□□□□□ -2.58
NEDD4-211ENST00000514893 COL6A5A8TX70 2615 aa-1.08□□□□□ -2.58
NEDD4-211ENST00000514893 MGAQ8IWI9 3026 aa-1.08□□□□□ -2.58
NEDD4-211ENST00000514893 C3P01024 1663 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 CD163L1Q9NR16 1453 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 M0QY20 66 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 MT1EP04732 61 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 KRTAP8-1Q8IUC2 63 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 C18orf32Q8TCD1 76 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 ADGRG4Q8IZF6 3080 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 ANKARQ7Z5J8 1434 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 A0A1B0GUL6 1792 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 MAST1Q9Y2H9 1570 aa-1.09□□□□□ -2.58
NEDD4-211ENST00000514893 SPTBN5Q9NRC6 3674 aaKnown RBP-1.1□□□□□ -2.58
NEDD4-211ENST00000514893 GNG13Q9P2W3 67 aa-1.1□□□□□ -2.59
NEDD4-211ENST00000514893 DNMBPQ6XZF7 1577 aa-1.1□□□□□ -2.59
NEDD4-211ENST00000514893 DIP2AQ14689 1571 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms