RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 TRRAPQ9Y4A5 3859 aa0.65□□□□□ -2.31
SGCB-203ENST00000514133 H0Y9P7 68 aa0.64□□□□□ -2.31
SGCB-203ENST00000514133 GNGT1P63211 74 aa0.64□□□□□ -2.31
SGCB-203ENST00000514133 Q5BKY6 102 aa0.64□□□□□ -2.31
SGCB-203ENST00000514133 SPTBN1Q01082 2364 aaKnown RBP0.64□□□□□ -2.31
SGCB-203ENST00000514133 SRRM2Q9UQ35 2752 aaKnown RBP0.64□□□□□ -2.31
SGCB-203ENST00000514133 ANK3Q12955 4377 aaKnown RBP0.64□□□□□ -2.31
SGCB-203ENST00000514133 HECTD4Q9Y4D8 3996 aa0.64□□□□□ -2.31
SGCB-203ENST00000514133 A0A1B0GU69 56 aa0.63□□□□□ -2.31
SGCB-203ENST00000514133 LEPROTL1O95214 131 aa0.63□□□□□ -2.31
SGCB-203ENST00000514133 C6orf201Q7Z4U5 140 aa0.63□□□□□ -2.31
SGCB-203ENST00000514133 PSENENQ9NZ42 101 aa0.63□□□□□ -2.31
SGCB-203ENST00000514133 PRKDCP78527 4128 aaKnown RBP0.63□□□□□ -2.31
SGCB-203ENST00000514133 D6R8Y8 96 aa0.62□□□□□ -2.31
SGCB-203ENST00000514133 CFDP00746 253 aaPredicted RBP0.62□□□□□ -2.31
SGCB-203ENST00000514133 MUSTN1Q8IVN3 82 aa0.62□□□□□ -2.31
SGCB-203ENST00000514133 C9orf62Q8N4C0 152 aa0.62□□□□□ -2.31
SGCB-203ENST00000514133 KNL1Q8NG31 2342 aa0.62□□□□□ -2.31
SGCB-203ENST00000514133 LYSTQ99698 3801 aa0.61□□□□□ -2.31
SGCB-203ENST00000514133 PVALEFA0A1B0GWK0 134 aa0.61□□□□□ -2.31
SGCB-203ENST00000514133 SPINK1P00995 79 aa0.61□□□□□ -2.31
SGCB-203ENST00000514133 PEA15Q15121 130 aa0.61□□□□□ -2.31
SGCB-203ENST00000514133 HMGN3Q15651 99 aa0.61□□□□□ -2.31
SGCB-203ENST00000514133 DEFB124Q8NES8 71 aa0.61□□□□□ -2.31
SGCB-203ENST00000514133 PKDREJQ9NTG1 2253 aa0.61□□□□□ -2.31
SGCB-203ENST00000514133 SACSQ9NZJ4 4579 aa0.6□□□□□ -2.31
SGCB-203ENST00000514133 LCE6AA0A183 80 aa0.6□□□□□ -2.31
SGCB-203ENST00000514133 K7EP34 96 aa0.6□□□□□ -2.31
SGCB-203ENST00000514133 SMIM11AP58511 58 aa0.6□□□□□ -2.31
SGCB-203ENST00000514133 PYY3Q5JQD4 70 aa0.6□□□□□ -2.31
SGCB-203ENST00000514133 AKAP6Q13023 2319 aa0.59□□□□□ -2.31
SGCB-203ENST00000514133 WFDC2Q14508 124 aa0.59□□□□□ -2.31
SGCB-203ENST00000514133 DNAH1Q9P2D7 4330 aa0.59□□□□□ -2.32
SGCB-203ENST00000514133 CYB5AP00167 134 aa0.58□□□□□ -2.32
SGCB-203ENST00000514133 ALKAL2Q6UX46 152 aa0.58□□□□□ -2.32
SGCB-203ENST00000514133 S100A16Q96FQ6 103 aaKnown RBP0.58□□□□□ -2.32
SGCB-203ENST00000514133 DYNC2H1Q8NCM8 4307 aaKnown RBP0.57□□□□□ -2.32
SGCB-203ENST00000514133 PKHD1P08F94 4074 aa0.57□□□□□ -2.32
SGCB-203ENST00000514133 DNAH7Q8WXX0 4024 aa0.56□□□□□ -2.32
SGCB-203ENST00000514133 DNAH9Q9NYC9 4486 aa0.56□□□□□ -2.32
SGCB-203ENST00000514133 HMGN2P05204 90 aaKnown RBP0.56□□□□□ -2.32
SGCB-203ENST00000514133 COX6B1P14854 86 aa0.56□□□□□ -2.32
SGCB-203ENST00000514133 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
SGCB-203ENST00000514133 DNAH3Q8TD57 4116 aa0.56□□□□□ -2.32
SGCB-203ENST00000514133 ALMS1Q8TCU4 4167 aa0.56□□□□□ -2.32
SGCB-203ENST00000514133 MYCBP2O75592 4640 aa0.56□□□□□ -2.32
SGCB-203ENST00000514133 PLIN4Q96Q06 1357 aa0.56□□□□□ -2.32
SGCB-203ENST00000514133 HRNRQ86YZ3 2850 aaPredicted RBP0.55□□□□□ -2.32
SGCB-203ENST00000514133 HSPG2P98160 4391 aa0.55□□□□□ -2.32
SGCB-203ENST00000514133 K7EQZ3 153 aa0.55□□□□□ -2.32
SGCB-203ENST00000514133 DEFB109BQ30KR1 87 aa0.55□□□□□ -2.32
SGCB-203ENST00000514133 Q9Y3F1 56 aa0.55□□□□□ -2.32
SGCB-203ENST00000514133 LRP1BQ9NZR2 4599 aa0.55□□□□□ -2.32
SGCB-203ENST00000514133 CD52P31358 61 aa0.54□□□□□ -2.32
SGCB-203ENST00000514133 Q5VSD8 79 aa0.54□□□□□ -2.32
SGCB-203ENST00000514133 USMG5Q96IX5 58 aa0.54□□□□□ -2.32
SGCB-203ENST00000514133 SPRR1AP35321 89 aa0.53□□□□□ -2.32
SGCB-203ENST00000514133 STARD9Q9P2P6 4700 aa0.53□□□□□ -2.32
SGCB-203ENST00000514133 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
SGCB-203ENST00000514133 DNAH10Q8IVF4 4471 aa0.52□□□□□ -2.33
SGCB-203ENST00000514133 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
SGCB-203ENST00000514133 IGLC2P0DOY2 106 aa0.52□□□□□ -2.33
SGCB-203ENST00000514133 IGLC3P0DOY3 106 aa0.52□□□□□ -2.33
SGCB-203ENST00000514133 NMSQ5H8A3 153 aa0.52□□□□□ -2.33
SGCB-203ENST00000514133 UBE2D4Q9Y2X8 147 aa0.52□□□□□ -2.33
SGCB-203ENST00000514133 PLECQ15149 4684 aaKnown RBP0.52□□□□□ -2.33
SGCB-203ENST00000514133 VPS13BQ7Z7G8 4022 aa0.51□□□□□ -2.33
SGCB-203ENST00000514133 VPS13DQ5THJ4 4388 aa0.51□□□□□ -2.33
SGCB-203ENST00000514133 DNAH2Q9P225 4427 aa0.51□□□□□ -2.33
SGCB-203ENST00000514133 LRP1Q07954 4544 aaKnown RBP0.51□□□□□ -2.33
SGCB-203ENST00000514133 COX8AP10176 69 aa0.51□□□□□ -2.33
SGCB-203ENST00000514133 SNRPFP62306 86 aaKnown RBP0.51□□□□□ -2.33
SGCB-203ENST00000514133 KRTAP19-6Q3LI70 58 aa0.51□□□□□ -2.33
SGCB-203ENST00000514133 FXYD6Q9H0Q3 95 aa0.51□□□□□ -2.33
SGCB-203ENST00000514133 DNAH17Q9UFH2 4485 aa0.51□□□□□ -2.33
SGCB-203ENST00000514133 U3KQA8 63 aa0.51□□□□□ -2.33
SGCB-203ENST00000514133 DYNC1H1Q14204 4646 aaKnown RBP0.51□□□□□ -2.33
SGCB-203ENST00000514133 DNAH6Q9C0G6 4158 aa0.51□□□□□ -2.33
SGCB-203ENST00000514133 LRP2P98164 4655 aa0.5□□□□□ -2.33
SGCB-203ENST00000514133 FAT2Q9NYQ8 4349 aa0.5□□□□□ -2.33
SGCB-203ENST00000514133 IQCF6A8MYZ5 107 aa0.5□□□□□ -2.33
SGCB-203ENST00000514133 PLGLAQ15195 96 aa0.5□□□□□ -2.33
SGCB-203ENST00000514133 CRIPTQ9P021 101 aa0.5□□□□□ -2.33
SGCB-203ENST00000514133 RABAC1Q9UI14 185 aa0.5□□□□□ -2.33
SGCB-203ENST00000514133 PKD1P98161 4303 aa0.5□□□□□ -2.33
SGCB-203ENST00000514133 WNK2Q9Y3S1 2297 aa0.49□□□□□ -2.33
SGCB-203ENST00000514133 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
SGCB-203ENST00000514133 SPRR1BP22528 89 aa0.49□□□□□ -2.33
SGCB-203ENST00000514133 DEFB112Q30KQ8 113 aa0.49□□□□□ -2.33
SGCB-203ENST00000514133 FAT1Q14517 4588 aa0.49□□□□□ -2.33
SGCB-203ENST00000514133 HMGA1P17096 107 aaKnown RBP0.48□□□□□ -2.33
SGCB-203ENST00000514133 TFF3Q07654 80 aa0.48□□□□□ -2.33
SGCB-203ENST00000514133 TDRG1Q3Y452 100 aa0.48□□□□□ -2.33
SGCB-203ENST00000514133 DNAH11Q96DT5 4516 aa0.48□□□□□ -2.33
SGCB-203ENST00000514133 DNAH5Q8TE73 4624 aa0.48□□□□□ -2.33
SGCB-203ENST00000514133 APOBP04114 4563 aaKnown RBP0.47□□□□□ -2.33
SGCB-203ENST00000514133 MYMXA0A1B0GTQ4 84 aa0.47□□□□□ -2.33
SGCB-203ENST00000514133 A0A1B0GUT8 65 aa0.47□□□□□ -2.33
SGCB-203ENST00000514133 LPAP08519 4548 aa0.47□□□□□ -2.33
SGCB-203ENST00000514133 SPTY2D1-AS1A0A0U1RR47 76 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms