RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 TTTY13Q9BZ97 58 aa4.27□□□□□ -1.73
CAST-239ENST00000513666 IFITM1P13164 125 aa4.26□□□□□ -1.73
CAST-239ENST00000513666 hADV29S1A0JD25 119 aa4.25□□□□□ -1.73
CAST-239ENST00000513666 H3BUT2 72 aa4.25□□□□□ -1.73
CAST-239ENST00000513666 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
CAST-239ENST00000513666 KMT2DO14686 5537 aa4.25□□□□□ -1.73
CAST-239ENST00000513666 LINC00313P59037 77 aa4.24□□□□□ -1.73
CAST-239ENST00000513666 PPDPFLQ8WWR9 84 aa4.24□□□□□ -1.73
CAST-239ENST00000513666 DLEU1O43261 78 aa4.23□□□□□ -1.73
CAST-239ENST00000513666 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
CAST-239ENST00000513666 SCGB1D4Q6XE38 83 aa4.23□□□□□ -1.73
CAST-239ENST00000513666 C12orf57Q99622 126 aa4.23□□□□□ -1.73
CAST-239ENST00000513666 SNHG12Q9BXW3 62 aa4.23□□□□□ -1.73
CAST-239ENST00000513666 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.22□□□□□ -1.73
CAST-239ENST00000513666 TEN1Q86WV5 123 aa4.22□□□□□ -1.73
CAST-239ENST00000513666 MUSTN1Q8IVN3 82 aa4.22□□□□□ -1.73
CAST-239ENST00000513666 SIGMAR1Q99720 223 aa4.22□□□□□ -1.73
CAST-239ENST00000513666 A0A087WSZ3 146 aa4.21□□□□□ -1.73
CAST-239ENST00000513666 A0A1B0GV90 55 aa4.21□□□□□ -1.73
CAST-239ENST00000513666 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.73
CAST-239ENST00000513666 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.73
CAST-239ENST00000513666 A6NN06 94 aa4.21□□□□□ -1.74
CAST-239ENST00000513666 VAMP8Q9BV40 100 aa4.21□□□□□ -1.74
CAST-239ENST00000513666 IGKV2-30P06310 120 aa4.2□□□□□ -1.74
CAST-239ENST00000513666 COX8AP10176 69 aa4.2□□□□□ -1.74
CAST-239ENST00000513666 Q6ZVQ6 151 aa4.19□□□□□ -1.74
CAST-239ENST00000513666 ATOH7Q8N100 152 aa4.19□□□□□ -1.74
CAST-239ENST00000513666 C4orf26Q17RF5 130 aa4.18□□□□□ -1.74
CAST-239ENST00000513666 SMIM20Q8N5G0 67 aa4.18□□□□□ -1.74
CAST-239ENST00000513666 HIGD1BQ9P298 99 aa4.18□□□□□ -1.74
CAST-239ENST00000513666 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
CAST-239ENST00000513666 SMIM6P0DI80 62 aa4.17□□□□□ -1.74
CAST-239ENST00000513666 SPINK7P58062 85 aa4.17□□□□□ -1.74
CAST-239ENST00000513666 IGKV4-1P06312 121 aa4.16□□□□□ -1.74
CAST-239ENST00000513666 SPATA45Q537H7 98 aa4.16□□□□□ -1.74
CAST-239ENST00000513666 PYY3Q5JQD4 70 aa4.15□□□□□ -1.75
CAST-239ENST00000513666 VPS25Q9BRG1 176 aa4.15□□□□□ -1.75
CAST-239ENST00000513666 ZCCHC13Q8WW36 166 aaKnown RBP4.14□□□□□ -1.75
CAST-239ENST00000513666 HIST1H4GQ99525 98 aa4.14□□□□□ -1.75
CAST-239ENST00000513666 FAM240AA0A1B0GVK7 77 aa4.13□□□□□ -1.75
CAST-239ENST00000513666 A0A1W2PNM2 257 aa4.13□□□□□ -1.75
CAST-239ENST00000513666 NDUFV3P56181 108 aaKnown RBP4.13□□□□□ -1.75
CAST-239ENST00000513666 WFDC13Q8IUB5 93 aa4.13□□□□□ -1.75
CAST-239ENST00000513666 FAM218AQ96MZ4 157 aa4.13□□□□□ -1.75
CAST-239ENST00000513666 UQCR10Q9UDW1 63 aa4.13□□□□□ -1.75
CAST-239ENST00000513666 IGHV6-1A0A0B4J1U7 121 aa4.12□□□□□ -1.75
CAST-239ENST00000513666 BVES-AS1Q5T3Y7 98 aa4.12□□□□□ -1.75
CAST-239ENST00000513666 MT1BP07438 61 aa4.11□□□□□ -1.75
CAST-239ENST00000513666 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
CAST-239ENST00000513666 A0A0B4J2C4 111 aa4.11□□□□□ -1.75
CAST-239ENST00000513666 H3BMG7 143 aa4.11□□□□□ -1.75
CAST-239ENST00000513666 SNCGO76070 127 aa4.11□□□□□ -1.75
CAST-239ENST00000513666 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
CAST-239ENST00000513666 HSD52Q0P140 79 aa4.11□□□□□ -1.75
CAST-239ENST00000513666 C14orf144Q96I85 54 aa4.11□□□□□ -1.75
CAST-239ENST00000513666 DEFB116Q30KQ4 102 aa4.1□□□□□ -1.75
CAST-239ENST00000513666 CEND1Q8N111 149 aa4.09□□□□□ -1.75
CAST-239ENST00000513666 LINC00472Q9H8W2 130 aa4.09□□□□□ -1.75
CAST-239ENST00000513666 C8orf87E5RJ46 101 aa4.08□□□□□ -1.76
CAST-239ENST00000513666 Q5VV11 94 aa4.08□□□□□ -1.76
CAST-239ENST00000513666 C2orf91Q6ZV80 131 aa4.08□□□□□ -1.76
CAST-239ENST00000513666 RAB37Q96AX2 223 aa4.08□□□□□ -1.76
CAST-239ENST00000513666 M0R143 59 aa4.07□□□□□ -1.76
CAST-239ENST00000513666 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
CAST-239ENST00000513666 TRBV7-4A0A0J9YYF1 115 aa4.06□□□□□ -1.76
CAST-239ENST00000513666 A0A1B0GVX0 72 aa4.06□□□□□ -1.76
CAST-239ENST00000513666 A0A1B0GX51 115 aa4.06□□□□□ -1.76
CAST-239ENST00000513666 H0YGX0 51 aa4.06□□□□□ -1.76
CAST-239ENST00000513666 H3BQ85 93 aa4.06□□□□□ -1.76
CAST-239ENST00000513666 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
CAST-239ENST00000513666 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
CAST-239ENST00000513666 PRO1854Q9UHT4 67 aa4.05□□□□□ -1.76
CAST-239ENST00000513666 K7ERU9 68 aa4.05□□□□□ -1.76
CAST-239ENST00000513666 COX6CP09669 75 aa4.05□□□□□ -1.76
CAST-239ENST00000513666 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
CAST-239ENST00000513666 FABP2P12104 132 aa4.04□□□□□ -1.76
CAST-239ENST00000513666 SPRR2EP22531 72 aa4.03□□□□□ -1.76
CAST-239ENST00000513666 SPRR2BP35325 72 aa4.03□□□□□ -1.76
CAST-239ENST00000513666 SPRR2AP35326 72 aa4.03□□□□□ -1.76
CAST-239ENST00000513666 BATFQ16520 125 aa4.03□□□□□ -1.76
CAST-239ENST00000513666 ANKRD29Q8N6D5 301 aa4.03□□□□□ -1.76
CAST-239ENST00000513666 FXYD2P54710 66 aa4.01□□□□□ -1.77
CAST-239ENST00000513666 RPS28P62857 69 aaKnown RBP4.01□□□□□ -1.77
CAST-239ENST00000513666 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
CAST-239ENST00000513666 LYRM7Q5U5X0 104 aa4.01□□□□□ -1.77
CAST-239ENST00000513666 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
CAST-239ENST00000513666 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
CAST-239ENST00000513666 SPRR2GQ9BYE4 73 aa4□□□□□ -1.77
CAST-239ENST00000513666 TRACP01848 142 aa4□□□□□ -1.77
CAST-239ENST00000513666 FAM236AA0A1B0GUQ0 79 aa3.99□□□□□ -1.77
CAST-239ENST00000513666 FAM236BA0A1B0GV22 79 aa3.99□□□□□ -1.77
CAST-239ENST00000513666 DNAL4O96015 105 aa3.99□□□□□ -1.77
CAST-239ENST00000513666 CCKP06307 115 aa3.99□□□□□ -1.77
CAST-239ENST00000513666 DSCR8Q96T75 97 aa3.99□□□□□ -1.77
CAST-239ENST00000513666 PSMB2P49721 201 aa3.98□□□□□ -1.77
CAST-239ENST00000513666 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
CAST-239ENST00000513666 IGKV3D-7A0A0C4DH55 119 aa3.97□□□□□ -1.77
CAST-239ENST00000513666 J3KT08 172 aa3.97□□□□□ -1.77
CAST-239ENST00000513666 IGKV2D-30A0A075B6S6 120 aa3.96□□□□□ -1.78
CAST-239ENST00000513666 TMEM256-PLSCR3K7ERE1 68 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms