RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 HRCT1Q6UXD1 115 aa2.94□□□□□ -1.94
MSH3-202ENST00000512258 PRO0461Q9UI25 63 aa2.94□□□□□ -1.94
MSH3-202ENST00000512258 IGLV8-61A0A075B6I0 122 aa2.93□□□□□ -1.94
MSH3-202ENST00000512258 IGFL1Q6UW32 110 aa2.93□□□□□ -1.94
MSH3-202ENST00000512258 PPDPFLQ8WWR9 84 aa2.93□□□□□ -1.94
MSH3-202ENST00000512258 F8WEM9 126 aa2.92□□□□□ -1.94
MSH3-202ENST00000512258 TMEM256-PLSCR3K7ERE1 68 aa2.92□□□□□ -1.94
MSH3-202ENST00000512258 UBE2V1Q13404 147 aa2.92□□□□□ -1.94
MSH3-202ENST00000512258 SSBP3-AS1Q7Z2R9 100 aa2.92□□□□□ -1.94
MSH3-202ENST00000512258 ANKRD29Q8N6D5 301 aa2.92□□□□□ -1.94
MSH3-202ENST00000512258 LINC00304Q8N9R0 145 aa2.92□□□□□ -1.94
MSH3-202ENST00000512258 DMBT1Q9UGM3 2413 aaPredicted RBP2.92□□□□□ -1.94
MSH3-202ENST00000512258 GTF2H5Q6ZYL4 71 aa2.91□□□□□ -1.94
MSH3-202ENST00000512258 A0A1W2PNM2 257 aa2.9□□□□□ -1.95
MSH3-202ENST00000512258 H3BQ85 93 aa2.9□□□□□ -1.95
MSH3-202ENST00000512258 H3BT86 120 aa2.9□□□□□ -1.95
MSH3-202ENST00000512258 OBSCN-AS1Q96MR7 158 aa2.9□□□□□ -1.95
MSH3-202ENST00000512258 RETNLBQ9BQ08 111 aa2.9□□□□□ -1.95
MSH3-202ENST00000512258 C14orf132Q9NPU4 83 aa2.9□□□□□ -1.95
MSH3-202ENST00000512258 HERC1Q15751 4861 aa2.9□□□□□ -1.95
MSH3-202ENST00000512258 TRBV7-4A0A0J9YYF1 115 aa2.89□□□□□ -1.95
MSH3-202ENST00000512258 RBM3P98179 157 aaKnown RBP2.89□□□□□ -1.95
MSH3-202ENST00000512258 Q6JHZ5 121 aa2.89□□□□□ -1.95
MSH3-202ENST00000512258 TRBV7-7A0A0K0K1E9 115 aa2.88□□□□□ -1.95
MSH3-202ENST00000512258 CCKP06307 115 aa2.88□□□□□ -1.95
MSH3-202ENST00000512258 PCP4P48539 62 aa2.88□□□□□ -1.95
MSH3-202ENST00000512258 DSCR10P59022 87 aa2.88□□□□□ -1.95
MSH3-202ENST00000512258 Q6ZQT0 140 aa2.88□□□□□ -1.95
MSH3-202ENST00000512258 VPS25Q9BRG1 176 aa2.88□□□□□ -1.95
MSH3-202ENST00000512258 A0A087WSZ3 146 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 F8W1H4 67 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 JMJD7-PLA2G4BH0Y9G9 81 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 SPINK1P00995 79 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 CD164Q04900 197 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 ETDBQ3ZM63 59 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 SPAG11AQ6PDA7 123 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 TEN1Q86WV5 123 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 DSCR8Q96T75 97 aa2.87□□□□□ -1.95
MSH3-202ENST00000512258 LOC110117498A0A087WWA1 95 aa2.86□□□□□ -1.95
MSH3-202ENST00000512258 Q6Q795 121 aa2.86□□□□□ -1.95
MSH3-202ENST00000512258 RPS29P62273 56 aaKnown RBP2.85□□□□□ -1.95
MSH3-202ENST00000512258 PRR4Q16378 134 aa2.85□□□□□ -1.95
MSH3-202ENST00000512258 C1orf195Q5TG92 126 aa2.85□□□□□ -1.95
MSH3-202ENST00000512258 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
MSH3-202ENST00000512258 DEFB116Q30KQ4 102 aa2.84□□□□□ -1.95
MSH3-202ENST00000512258 Q5XG85 94 aa2.84□□□□□ -1.95
MSH3-202ENST00000512258 Q96NJ1 140 aa2.84□□□□□ -1.95
MSH3-202ENST00000512258 LIMD2Q9BT23 127 aa2.84□□□□□ -1.95
MSH3-202ENST00000512258 HMCN2Q8NDA2 5059 aa2.83□□□□□ -1.96
MSH3-202ENST00000512258 IGLV7-46A0A075B6I9 117 aa2.82□□□□□ -1.96
MSH3-202ENST00000512258 PDE6GP18545 87 aa2.82□□□□□ -1.96
MSH3-202ENST00000512258 ASB16-AS1Q495Z4 193 aa2.82□□□□□ -1.96
MSH3-202ENST00000512258 LINC00472Q9H8W2 130 aa2.82□□□□□ -1.96
MSH3-202ENST00000512258 LINC00846Q9NV44 126 aa2.81□□□□□ -1.96
MSH3-202ENST00000512258 SS18L2Q9UHA2 77 aa2.81□□□□□ -1.96
MSH3-202ENST00000512258 LPAP08519 4548 aa2.81□□□□□ -1.96
MSH3-202ENST00000512258 C9orf92A6NGG3 77 aa2.8□□□□□ -1.96
MSH3-202ENST00000512258 IGKV4-1P06312 121 aa2.8□□□□□ -1.96
MSH3-202ENST00000512258 FP248Q71RG6 208 aaPredicted RBP2.8□□□□□ -1.96
MSH3-202ENST00000512258 NREPQ16612 68 aa2.79□□□□□ -1.96
MSH3-202ENST00000512258 Q6ZVQ6 151 aa2.79□□□□□ -1.96
MSH3-202ENST00000512258 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
MSH3-202ENST00000512258 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
MSH3-202ENST00000512258 A0A1B0GW54 56 aa2.78□□□□□ -1.96
MSH3-202ENST00000512258 LRP2P98164 4655 aa2.78□□□□□ -1.96
MSH3-202ENST00000512258 IGHV6-1A0A0B4J1U7 121 aa2.77□□□□□ -1.97
MSH3-202ENST00000512258 IGKV3D-7A0A0C4DH55 119 aa2.77□□□□□ -1.97
MSH3-202ENST00000512258 TPRXLQ17RH7 258 aa2.77□□□□□ -1.97
MSH3-202ENST00000512258 Q8N9L7 120 aa2.77□□□□□ -1.97
MSH3-202ENST00000512258 FAM240AA0A1B0GVK7 77 aa2.76□□□□□ -1.97
MSH3-202ENST00000512258 K7EQZ3 153 aa2.76□□□□□ -1.97
MSH3-202ENST00000512258 UBL5Q9BZL1 73 aa2.76□□□□□ -1.97
MSH3-202ENST00000512258 A0A1B0GVX0 72 aa2.75□□□□□ -1.97
MSH3-202ENST00000512258 A8MWP4 228 aa2.75□□□□□ -1.97
MSH3-202ENST00000512258 J3KT08 172 aa2.75□□□□□ -1.97
MSH3-202ENST00000512258 BPY2O14599 106 aa2.75□□□□□ -1.97
MSH3-202ENST00000512258 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
MSH3-202ENST00000512258 ACYP1P07311 99 aa2.74□□□□□ -1.97
MSH3-202ENST00000512258 PRR15Q8IV56 129 aa2.74□□□□□ -1.97
MSH3-202ENST00000512258 MMP24-AS1A0A0U1RRL7 71 aa2.73□□□□□ -1.97
MSH3-202ENST00000512258 LINC00313P59037 77 aa2.73□□□□□ -1.97
MSH3-202ENST00000512258 C8orf17Q9NRJ1 99 aa2.73□□□□□ -1.97
MSH3-202ENST00000512258 J3QR89 54 aa2.72□□□□□ -1.97
MSH3-202ENST00000512258 NDUFB1O75438 58 aa2.72□□□□□ -1.97
MSH3-202ENST00000512258 C8orf87E5RJ46 101 aa2.71□□□□□ -1.98
MSH3-202ENST00000512258 K7ERU9 68 aa2.71□□□□□ -1.98
MSH3-202ENST00000512258 RPL37P61927 97 aaKnown RBP2.71□□□□□ -1.98
MSH3-202ENST00000512258 CXCL6P80162 114 aa2.71□□□□□ -1.98
MSH3-202ENST00000512258 LINC00643Q86TS7 51 aa2.71□□□□□ -1.98
MSH3-202ENST00000512258 WFDC13Q8IUB5 93 aa2.71□□□□□ -1.98
MSH3-202ENST00000512258 C20orf166-AS1Q96NR2 134 aa2.71□□□□□ -1.98
MSH3-202ENST00000512258 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.98
MSH3-202ENST00000512258 A0A087WVE0 104 aa2.7□□□□□ -1.98
MSH3-202ENST00000512258 A8MUU9 505 aa2.7□□□□□ -1.98
MSH3-202ENST00000512258 PCOTHQ58A44 107 aa2.7□□□□□ -1.98
MSH3-202ENST00000512258 hDV103S1A0JD37 113 aa2.69□□□□□ -1.98
MSH3-202ENST00000512258 MT-ATP8P03928 68 aa2.69□□□□□ -1.98
MSH3-202ENST00000512258 HIST1H4AP62805 103 aaKnown RBP2.69□□□□□ -1.98
MSH3-202ENST00000512258 CASC2Q6XLA1 102 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 224.7 ms